FFCP PHASE1:Hg19::chr4:155531281..155531308,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2266 | |EntrezGene=2266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3694 | |HGNC=3694 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_uc003ioi.2_5end | |association_with_transcript=40bp_to_uc003ioi.2_5end | ||
|cluster_id=chr4:155531281..155531308,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_6_at_FGG_5end | |description=CAGE_peak_6_at_FGG_5end | ||
|id=chr4:155531281..155531308,- | |id=chr4:155531281..155531308,- | ||
|ontology_enrichment_celltype=CL:0000181!1.83e-28!12;CL:0000417!1.83e-28!12;CL:0000668!1.83e-28!12;CL:0000414!1.83e-28!12;CL:0000412!1.83e-28!12;CL:0000182!1.83e-28!12;CL:0000223!6.77e-12!59;CL:0002563!2.25e-10!4 | |ontology_enrichment_celltype=CL:0000181!1.83e-28!12;CL:0000417!1.83e-28!12;CL:0000668!1.83e-28!12;CL:0000414!1.83e-28!12;CL:0000412!1.83e-28!12;CL:0000182!1.83e-28!12;CL:0000223!6.77e-12!59;CL:0002563!2.25e-10!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.00e-19;12!CL:0000047;1.46e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.00e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.06e-10;11!UBERON:0009497;1.26e-08;13 | |||
|ontology_enrichment_disease=DOID:178!1.21e-10!1;DOID:326!1.21e-10!1;DOID:3978!1.21e-10!1;DOID:3394!1.21e-10!1;DOID:5844!1.21e-10!1 | |ontology_enrichment_disease=DOID:178!1.21e-10!1;DOID:326!1.21e-10!1;DOID:3978!1.21e-10!1;DOID:3394!1.21e-10!1;DOID:5844!1.21e-10!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.49e-31!19;UBERON:0006925!1.49e-31!19;UBERON:0008836!1.49e-31!19;UBERON:0005057!1.17e-28!26;UBERON:0008835!3.92e-27!22;UBERON:0003894!3.92e-27!22;UBERON:0009854!6.48e-26!23;UBERON:0007499!9.05e-24!25;UBERON:0009497!9.05e-24!25;UBERON:0000015!9.05e-24!25;UBERON:0002423!9.05e-24!25;UBERON:0006235!9.05e-24!25;UBERON:0004161!9.05e-24!25;UBERON:0003929!1.44e-23!54;UBERON:0009856!8.05e-23!26;UBERON:0002368!5.41e-21!35;UBERON:0002365!5.44e-19!31;UBERON:0002330!5.44e-19!31;UBERON:0000949!4.60e-16!45;UBERON:0005911!6.90e-15!82;UBERON:0002530!8.65e-15!59;UBERON:0005172!6.29e-13!55;UBERON:0005173!6.29e-13!55;UBERON:0002417!1.55e-11!61;UBERON:0000916!1.55e-11!61;UBERON:0001242!2.25e-10!4;UBERON:0001262!2.25e-10!4;UBERON:0004786!2.25e-10!4;UBERON:0004808!2.25e-10!4;UBERON:0001277!2.25e-10!4;UBERON:0004921!1.10e-08!129;UBERON:0004185!1.10e-08!129;UBERON:0003350!1.79e-08!5;UBERON:0000490!4.52e-08!138;UBERON:0000077!3.37e-07!130;UBERON:0001007!6.43e-07!155;UBERON:0001555!6.43e-07!155;UBERON:0007026!6.43e-07!155 | |ontology_enrichment_uberon=UBERON:0002107!1.49e-31!19;UBERON:0006925!1.49e-31!19;UBERON:0008836!1.49e-31!19;UBERON:0005057!1.17e-28!26;UBERON:0008835!3.92e-27!22;UBERON:0003894!3.92e-27!22;UBERON:0009854!6.48e-26!23;UBERON:0007499!9.05e-24!25;UBERON:0009497!9.05e-24!25;UBERON:0000015!9.05e-24!25;UBERON:0002423!9.05e-24!25;UBERON:0006235!9.05e-24!25;UBERON:0004161!9.05e-24!25;UBERON:0003929!1.44e-23!54;UBERON:0009856!8.05e-23!26;UBERON:0002368!5.41e-21!35;UBERON:0002365!5.44e-19!31;UBERON:0002330!5.44e-19!31;UBERON:0000949!4.60e-16!45;UBERON:0005911!6.90e-15!82;UBERON:0002530!8.65e-15!59;UBERON:0005172!6.29e-13!55;UBERON:0005173!6.29e-13!55;UBERON:0002417!1.55e-11!61;UBERON:0000916!1.55e-11!61;UBERON:0001242!2.25e-10!4;UBERON:0001262!2.25e-10!4;UBERON:0004786!2.25e-10!4;UBERON:0004808!2.25e-10!4;UBERON:0001277!2.25e-10!4;UBERON:0004921!1.10e-08!129;UBERON:0004185!1.10e-08!129;UBERON:0003350!1.79e-08!5;UBERON:0000490!4.52e-08!138;UBERON:0000077!3.37e-07!130;UBERON:0001007!6.43e-07!155;UBERON:0001555!6.43e-07!155;UBERON:0007026!6.43e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.62e-33;19!UBERON:0006925;6.62e-33;19!UBERON:0002423;4.07e-25;25!UBERON:0002365;2.82e-20;31!UBERON:0002330;2.82e-20;31!UBERON:0002368;1.53e-17;33!UBERON:0000949;9.66e-13;43!UBERON:0005172;3.26e-09;52!UBERON:0005173;3.26e-09;52!UBERON:0002417;3.74e-07;58!UBERON:0000916;3.74e-07;58!UBERON:0002530;9.30e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.62e-33,19;UBERON:0006925,6.62e-33,19;UBERON:0008836,6.62e-33,19;UBERON:0008835,1.76e-28,22;UBERON:0003894,1.76e-28,22;UBERON:0009854,2.91e-27,23;UBERON:0007499,4.07e-25,25;UBERON:0009497,4.07e-25,25;UBERON:0000015,4.07e-25,25;UBERON:0002423,4.07e-25,25;UBERON:0006235,4.07e-25,25;UBERON:0004161,4.07e-25,25;UBERON:0009856,3.63e-24,26;UBERON:0002365,2.48e-20,31;UBERON:0002330,2.48e-20,31;UBERON:0002368,4.75e-18,35;UBERON:0000949,4.14e-14,45;UBERON:0003929,8.40e-12,54;UBERON:0005172,8.40e-12,54;UBERON:0005173,8.40e-12,54;UBERON:0002530,8.02e-11,59;UBERON:0002417,1.20e-10,60;UBERON:0000916,1.20e-10,60;UBERON:0005911,7.71e-08,82;UBERON:0001041,2.13e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.237114625169,57.9868057839799,21.2684366405305,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07116361708914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.472699093843342,0.412079291905832,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.8018347081439,5.30027555648885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.237114625169,57.9868057839799,21.2684366405305,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07116361708914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.472699093843342,0.412079291905832,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.8018347081439,5.30027555648885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@FGG | |short_description=p6@FGG | ||
}} | }} |
Latest revision as of 07:35, 16 September 2015
Short description: | p6@FGG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FGG_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 40bp_to_uc003ioi.2_5end |
EntrezGene: | FGG |
HGNC: | 3694 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.00e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 6.62e-33 | 19 |
digestive gland | 6.62e-33 | 19 |
liver bud | 6.62e-33 | 19 |
hepatic diverticulum | 1.76e-28 | 22 |
liver primordium | 1.76e-28 | 22 |
digestive tract diverticulum | 2.91e-27 | 23 |
epithelial sac | 4.07e-25 | 25 |
epithelium of foregut-midgut junction | 4.07e-25 | 25 |
anatomical boundary | 4.07e-25 | 25 |
hepatobiliary system | 4.07e-25 | 25 |
foregut-midgut junction | 4.07e-25 | 25 |
septum transversum | 4.07e-25 | 25 |
sac | 3.63e-24 | 26 |
exocrine gland | 2.48e-20 | 31 |
exocrine system | 2.48e-20 | 31 |
endocrine gland | 4.75e-18 | 35 |
endocrine system | 4.14e-14 | 45 |
gut epithelium | 8.40e-12 | 54 |
abdomen element | 8.40e-12 | 54 |
abdominal segment element | 8.40e-12 | 54 |
gland | 8.02e-11 | 59 |
abdominal segment of trunk | 1.20e-10 | 60 |
abdomen | 1.20e-10 | 60 |
endo-epithelium | 7.71e-08 | 82 |
foregut | 2.13e-07 | 87 |