FFCP PHASE1:Hg19::chr2:241080084..241080093,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:241080084..241080093,-
|short_description=p5@OTOS
|description=CAGE_peak_5_at_OTOS_5end
|association_with_transcript=-11bp_to_ENST00000319460,NM_148961,uc0...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=150677 | |EntrezGene=150677 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22644 | |HGNC=22644 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NHW6 | |UniProt=Q8NHW6 | ||
|association_with_transcript=-11bp_to_ENST00000319460,NM_148961,uc002vyv.2_5end | |||
|cluster_id=chr2:241080084..241080093,- | |||
|coexpression_cluster_id=C115 | |||
|description=CAGE_peak_5_at_OTOS_5end | |||
|id=chr2:241080084..241080093,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.09e-48!57;UBERON:0005068!2.09e-48!57;UBERON:0006241!2.09e-48!57;UBERON:0007135!2.09e-48!57;UBERON:0002780!6.67e-48!41;UBERON:0001890!6.67e-48!41;UBERON:0006240!6.67e-48!41;UBERON:0003080!9.99e-47!42;UBERON:0002616!1.08e-46!59;UBERON:0000955!5.52e-39!69;UBERON:0006238!5.52e-39!69;UBERON:0002791!6.66e-39!33;UBERON:0002020!7.05e-38!34;UBERON:0003528!7.05e-38!34;UBERON:0001893!9.90e-38!34;UBERON:0001017!2.75e-36!82;UBERON:0002619!1.37e-34!22;UBERON:0005743!1.71e-34!86;UBERON:0001869!3.23e-34!32;UBERON:0003056!1.39e-31!61;UBERON:0003075!3.03e-31!86;UBERON:0007284!3.03e-31!86;UBERON:0000073!5.39e-31!94;UBERON:0001016!5.39e-31!94;UBERON:0001950!1.14e-30!20;UBERON:0000956!1.98e-30!25;UBERON:0000203!1.98e-30!25;UBERON:0002346!9.82e-30!90;UBERON:0007023!1.95e-28!115;UBERON:0000033!8.74e-21!123;UBERON:0000153!1.10e-19!129;UBERON:0007811!1.10e-19!129;UBERON:0000007!1.59e-18!2;UBERON:0004121!4.86e-16!169;UBERON:0000924!1.34e-15!173;UBERON:0006601!1.34e-15!173;UBERON:0000200!7.67e-13!6;UBERON:0000025!3.73e-12!194;UBERON:0002771!5.58e-12!3;UBERON:0001896!1.02e-11!3;UBERON:0005290!1.02e-11!3;UBERON:0010096!1.02e-11!3;UBERON:0001894!1.41e-11!7;UBERON:0006222!1.41e-11!7;UBERON:0001871!5.94e-10!7;UBERON:0002022!6.31e-10!1;UBERON:0002298!8.85e-10!8;UBERON:0003296!1.01e-09!4;UBERON:0010133!1.01e-09!4;UBERON:0002902!2.08e-09!1;UBERON:0009899!2.08e-09!1;UBERON:0002336!2.26e-09!1;UBERON:0001018!2.26e-09!1;UBERON:0002473!2.26e-09!1;UBERON:0005340!2.26e-09!1;UBERON:0002316!2.26e-09!1;UBERON:0003544!2.26e-09!1;UBERON:0001020!2.26e-09!1;UBERON:0005970!2.26e-09!1;UBERON:0002437!2.26e-09!1;UBERON:0000477!2.35e-09!286;UBERON:0002581!2.46e-09!1;UBERON:0004111!3.79e-09!241;UBERON:0002420!5.99e-09!9;UBERON:0007245!5.99e-09!9;UBERON:0010009!5.99e-09!9;UBERON:0010011!5.99e-09!9;UBERON:0000454!5.99e-09!9;UBERON:0002308!6.33e-09!9;UBERON:0000125!6.33e-09!9;UBERON:0000483!2.16e-08!309;UBERON:0000119!2.82e-08!312;UBERON:0000349!8.83e-08!5;UBERON:0002046!9.13e-08!5;UBERON:0004117!9.13e-08!5;UBERON:0007689!9.13e-08!5;UBERON:0007123!9.13e-08!5;UBERON:0003091!9.13e-08!5;UBERON:0002021!1.27e-07!5;UBERON:0001872!1.83e-07!5;UBERON:0000064!8.28e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;3.29e-195;2!UBERON:0003296;1.55e-98;4!UBERON:0010133;1.55e-98;4!UBERON:0001894;4.76e-57;7!UBERON:0002368;1.76e-12;33!UBERON:0002780;3.81e-10;41!UBERON:0001890;3.81e-10;41!UBERON:0000073;1.53e-08;53!UBERON:0002616;1.53e-08;53!UBERON:0000949;7.93e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.29e-195,2;UBERON:0003296,1.55e-98,4;UBERON:0010133,1.55e-98,4;UBERON:0001894,4.76e-57,7;UBERON:0006222,4.76e-57,7;UBERON:0002368,1.42e-12,35;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000949,4.55e-10,45;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0002530,5.66e-08,59;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,1.82089681270989,4.09791944432336,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0.12729431655633,0.404234377916439,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,1.82089681270989,4.09791944432336,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0.12729431655633,0.404234377916439,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@OTOS | |||
}} | }} |
Latest revision as of 07:18, 16 September 2015
Short description: | p5@OTOS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_OTOS_5end |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | -11bp_to_ENST00000319460, NM_148961, uc002vyv.2_5end |
EntrezGene: | OTOS |
HGNC: | 22644 |
UniProt: | Q8NHW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.29e-195 | 2 |
gland of diencephalon | 1.55e-98 | 4 |
neuroendocrine gland | 1.55e-98 | 4 |
diencephalon | 4.76e-57 | 7 |
future diencephalon | 4.76e-57 | 7 |
endocrine gland | 1.42e-12 | 35 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
endocrine system | 4.55e-10 | 45 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
gland | 5.66e-08 | 59 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |