FFCP PHASE1:Hg19::chr6:152958269..152958296,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt=F5GXQ8 | |UniProt=F5GXQ8 | ||
|association_with_transcript=-251bp_to_ENST00000367248_5end | |association_with_transcript=-251bp_to_ENST00000367248_5end | ||
|cluster_id=chr6:152958269..152958296,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_12_at_SYNE1_5end | |description=CAGE_peak_12_at_SYNE1_5end | ||
|id=chr6:152958269..152958296,- | |id=chr6:152958269..152958296,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;5.60e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.18e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.63e-10;3!UBERON:0006601;3.93e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.96e-43!115;UBERON:0001049!3.10e-36!57;UBERON:0005068!3.10e-36!57;UBERON:0006241!3.10e-36!57;UBERON:0007135!3.10e-36!57;UBERON:0001017!8.72e-32!82;UBERON:0002616!2.84e-31!59;UBERON:0000955!5.92e-31!69;UBERON:0006238!5.92e-31!69;UBERON:0005743!1.27e-30!86;UBERON:0002780!9.31e-29!41;UBERON:0001890!9.31e-29!41;UBERON:0006240!9.31e-29!41;UBERON:0003080!9.35e-28!42;UBERON:0002020!3.94e-26!34;UBERON:0003528!3.94e-26!34;UBERON:0001893!4.59e-26!34;UBERON:0000073!9.08e-26!94;UBERON:0001016!9.08e-26!94;UBERON:0002791!5.55e-25!33;UBERON:0001869!1.27e-24!32;UBERON:0002346!1.45e-21!90;UBERON:0003075!2.68e-21!86;UBERON:0007284!2.68e-21!86;UBERON:0001950!3.07e-21!20;UBERON:0002619!5.15e-21!22;UBERON:0000153!1.24e-19!129;UBERON:0007811!1.24e-19!129;UBERON:0000956!1.28e-17!25;UBERON:0000203!1.28e-17!25;UBERON:0000033!1.96e-17!123;UBERON:0003056!3.49e-16!61;UBERON:0000924!5.42e-14!173;UBERON:0006601!5.42e-14!173;UBERON:0004121!1.41e-13!169;UBERON:0002420!3.04e-10!9;UBERON:0007245!3.04e-10!9;UBERON:0010009!3.04e-10!9;UBERON:0010011!3.04e-10!9;UBERON:0000454!3.04e-10!9;UBERON:0002308!3.51e-10!9;UBERON:0000125!3.51e-10!9;UBERON:0003076!1.69e-09!15;UBERON:0003057!1.69e-09!15;UBERON:0004733!3.90e-09!12;UBERON:0002028!3.90e-09!12;UBERON:0007277!3.90e-09!12;UBERON:0009663!2.96e-08!7;UBERON:0000475!3.09e-08!365;UBERON:0004732!3.41e-08!13;UBERON:0000200!4.59e-08!6;UBERON:0001871!2.01e-07!7;UBERON:0001872!3.93e-07!5;UBERON:0002298!4.59e-07!8;UBERON:0002021!7.74e-07!5;UBERON:0000025!9.11e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.12e-46;32!UBERON:0002619;1.62e-45;22!UBERON:0001950;3.58e-45;20!UBERON:0002791;2.81e-43;32!UBERON:0001893;3.64e-42;34!UBERON:0003528;1.01e-41;34!UBERON:0002020;1.01e-41;34!UBERON:0000956;1.32e-39;25!UBERON:0000203;1.32e-39;25!UBERON:0000073;6.69e-38;53!UBERON:0002616;6.69e-38;53!UBERON:0002780;5.88e-37;41!UBERON:0001890;5.88e-37;41!UBERON:0000955;4.75e-27;68!UBERON:0001017;1.60e-26;75!UBERON:0001016;2.03e-20;83!UBERON:0000200;2.59e-17;6!UBERON:0004733;4.86e-15;12!UBERON:0002028;4.86e-15;12!UBERON:0001872;6.98e-15;5!UBERON:0002021;4.33e-14;5!UBERON:0004732;9.20e-14;13!UBERON:0007023;1.65e-12;114!UBERON:0002298;4.38e-12;6!UBERON:0002420;3.12e-11;9!UBERON:0007245;3.12e-11;9!UBERON:0010009;3.12e-11;9!UBERON:0010011;3.12e-11;9!UBERON:0000454;3.12e-11;9!UBERON:0000125;3.85e-11;9!UBERON:0002308;3.85e-11;9!UBERON:0009663;3.33e-10;7!UBERON:0001870;4.66e-10;3!UBERON:0001871;5.81e-10;6!UBERON:0001896;4.06e-09;3!UBERON:0005290;4.06e-09;3!UBERON:0002680;1.18e-08;9!UBERON:0001895;1.18e-08;9!UBERON:0011216;1.28e-08;132!UBERON:0000369;1.89e-07;4!UBERON:0002435;1.89e-07;4!UBERON:0000204;1.89e-07;4!UBERON:0002702;2.20e-07;2!UBERON:0000007;3.78e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.70e-65,53;UBERON:0002616,9.70e-65,53;UBERON:0001049,3.61e-64,56;UBERON:0005068,3.61e-64,56;UBERON:0006241,3.61e-64,56;UBERON:0007135,3.61e-64,56;UBERON:0000955,1.02e-56,68;UBERON:0006238,1.02e-56,68;UBERON:0001017,5.14e-54,81;UBERON:0001869,1.03e-52,32;UBERON:0002780,2.07e-50,41;UBERON:0001890,2.07e-50,41;UBERON:0003080,2.07e-50,41;UBERON:0006240,2.07e-50,41;UBERON:0001893,2.86e-49,34;UBERON:0003528,2.99e-49,34;UBERON:0002020,2.99e-49,34;UBERON:0002791,2.13e-48,32;UBERON:0001016,1.40e-47,89;UBERON:0002619,1.26e-45,22;UBERON:0001950,2.92e-45,20;UBERON:0007023,1.83e-44,114;UBERON:0003075,1.00e-40,82;UBERON:0007284,1.00e-40,82;UBERON:0000956,1.05e-39,25;UBERON:0000203,1.05e-39,25;UBERON:0002346,2.29e-38,86;UBERON:0010371,1.38e-35,104;UBERON:0003056,1.79e-31,61;UBERON:0010314,4.14e-26,132;UBERON:0004121,2.17e-23,171;UBERON:0000924,2.17e-23,171;UBERON:0006601,2.17e-23,171;UBERON:0011216,1.17e-21,223;UBERON:0000025,1.04e-18,192;UBERON:0000200,3.27e-17,6;UBERON:0004111,1.96e-15,240;UBERON:0001872,5.64e-15,5;UBERON:0004733,6.00e-15,12;UBERON:0002028,6.00e-15,12;UBERON:0007277,6.00e-15,12;UBERON:0003076,1.88e-14,15;UBERON:0003057,1.88e-14,15;UBERON:0002021,2.85e-14,5;UBERON:0004732,1.12e-13,13;UBERON:0002298,5.66e-12,6;UBERON:0002420,4.38e-11,9;UBERON:0007245,4.38e-11,9;UBERON:0010009,4.38e-11,9;UBERON:0010011,4.38e-11,9;UBERON:0000454,4.38e-11,9;UBERON:0000125,5.25e-11,9;UBERON:0002308,5.25e-11,9;UBERON:0000483,3.29e-10,306;UBERON:0009663,4.43e-10,7;UBERON:0000119,5.35e-10,309;UBERON:0001870,5.46e-10,3;UBERON:0001871,6.28e-10,6;UBERON:0001896,4.85e-09,3;UBERON:0005290,4.85e-09,3;UBERON:0010096,4.85e-09,3;UBERON:0002680,1.27e-08,9;UBERON:0001895,1.27e-08,9;UBERON:0010092,1.27e-08,9;UBERON:0000369,1.63e-07,4;UBERON:0002435,1.63e-07,4;UBERON:0000204,1.63e-07,4;UBERON:0010082,1.63e-07,4;UBERON:0002702,2.32e-07,2;UBERON:0000007,3.86e-07,2;UBERON:0002771,9.55e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0.34362744548263,0,0,1.30216690771284,0,0.301150238155546,0.511946444617674,0,0.710331756132051,1.64225599384209,1.41124720257313,0.267440195783507,1.15859523106239,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0.150238058906597,0,0.717558542755448,0.213557388818567,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,0.710019185033229,0,0.339121184620975,0,0,0,0,0,0,0,0,0.36497735907583,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0.788123040807709,0.431255149719035,1.15508732651774,0,1.30139853857622,0,0.335032530668698,0,1.49801404789436,2.99161459204025,1.65766205374414,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.74709290462411,0,0,0,0,0.460385919864187,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0.127612712494584,0,0,1.25924938732256,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,1.01489521846434,0,2.27858874869665,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0.111443384277478,0,0,0,0,0.994147647766298,3.09472716103128,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,1.93866549219044,1.57705766875147,5.98841394003583,0,0.0874599999961957,0,0,0,0,0.689486746482929,0,0,0.885741385813839,2.77371808838438,13.7323562685375,14.9282000907153,8.27533333069933,2.85201016300164,0.32681539055697,0,1.53900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.67401132980677,0,1.1713222286267,0,0.19566461893209,0,1.57833761139756,0,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0.859930162358083,0,0,0,0.290967049465258,0.529536760149002,0.451961481561065,0,0,2.27918865441163,0,0,0.426905989478705,0,0,0,0,0,0,0,0.543616824294456,0.209205692624666,0,0,1.20084057741958,1.36905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,1.44119953416961,0,0,0,0,0,0,0,2.58786471611994,0.321506296930038,0.137539436597234,0,0,0,1.39723980313457,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32709321450791,0.92562821219883,0,0,0.854299300541557,1.57204305099666,2.07119527673598,0,0.197611631897944,0,0,0,0,0,0,0,5.31640907980192,2.07444650333337,3.3801551290755,1.72022758707021,3.10601344303186,1.1177352529449,0,0,0,0,0,1.40500471742064,1.01444720027578,0,0,0,0,0.251567901752575,0,0,0.302461847526478,0,0,0.477890301491107,0,0.465788870628778,0,0,0,0.601030435988874,0,0.406870733204662,0,0.537052785212442,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.495743057036009,0,0,0,0,0,0,2.56916900385838,2.8339315265117,3.19267718114303,1.64093091392604,1.51243017733031,1.45230230174858,3.71393984953257,0,0,0,0,0,0,0,0,1.88025820873143,0,0,0,0,0,2.43135304626221,3.90539049306924,5.37385670903079,1.8390584956233,5.4697480901822,0,0,0,0,0,0,2.42786241694653,3.41493287026946,0,0,0,3.12660771693426,1.24968269769413,0,0,1.64835494986079,3.61365856806804,0,1.82631744101899,0,0,0.500335809236594,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,1.2679671827502,1.35941691750254,0.469919589899268,0.966868319603658,0,0,0,0,0.730336388246517,0.458729283404541,0.430018749454354,0.157771562193185,1.29183831362738,1.30905207102113,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0.985123076837112,0.803892390468535,0.829169439458779,0.827463966895162,0.426467963801962,0.476128862927481,0.258355639344024,0.744896571550295,0,0.0636471582781649,0,0.435433495793923,0.342233301085281,0.134704106029175,0.502055437748735,0.332660356546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| ||
|short_description=p12@SYNE1 | |short_description=p12@SYNE1 | ||
}} | }} |
Latest revision as of 07:09, 16 September 2015
Short description: | p12@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SYNE1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -251bp_to_ENST00000367248_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | F5GXQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.18e-09 | 3 |