FFCP PHASE1:Hg19::chr4:155490396..155490417,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2244 | |EntrezGene=2244 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=3662 | |HGNC=3662 | ||
|TSSclassifier=strong | |||
|UniProt=P02675 | |UniProt=P02675 | ||
|association_with_transcript=67bp_to_J00133_5end | |association_with_transcript=67bp_to_J00133_5end | ||
|cluster_id=chr4:155490396..155490417,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_8_at_FGB_5end | |description=CAGE_peak_8_at_FGB_5end | ||
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|ontology_enrichment_celltype=CL:0000181!9.77e-30!12;CL:0000417!9.77e-30!12;CL:0000668!9.77e-30!12;CL:0000414!9.77e-30!12;CL:0000412!9.77e-30!12;CL:0000182!9.77e-30!12;CL:0000313!6.00e-11!1;CL:0000223!6.00e-10!59 | |ontology_enrichment_celltype=CL:0000181!9.77e-30!12;CL:0000417!9.77e-30!12;CL:0000668!9.77e-30!12;CL:0000414!9.77e-30!12;CL:0000412!9.77e-30!12;CL:0000182!9.77e-30!12;CL:0000313!6.00e-11!1;CL:0000223!6.00e-10!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.87e-19;12!CL:0002563;1.98e-07;4 | |ontology_enrichment_celltype_v019=CL:0000182;1.87e-19;12!CL:0002563;1.98e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.87e-19,12;CL:0002563,2.04e-07,4;CL:0000223,2.72e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.29e-10;11!UBERON:0009497;1.31e-08;13!CL:0000223;7.90e-07;58 | |ontology_enrichment_development_v019=UBERON:0004161;5.29e-10;11!UBERON:0009497;1.31e-08;13!CL:0000223;7.90e-07;58 | ||
|ontology_enrichment_disease=DOID:178!3.28e-11!1;DOID:326!3.28e-11!1;DOID:3978!3.28e-11!1;DOID:3394!3.28e-11!1;DOID:5844!3.28e-11!1;DOID:2152!6.00e-11!1 | |ontology_enrichment_disease=DOID:178!3.28e-11!1;DOID:326!3.28e-11!1;DOID:3978!3.28e-11!1;DOID:3394!3.28e-11!1;DOID:5844!3.28e-11!1;DOID:2152!6.00e-11!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.24e-33!19;UBERON:0006925!5.24e-33!19;UBERON:0008836!5.24e-33!19;UBERON:0008835!2.15e-28!22;UBERON:0003894!2.15e-28!22;UBERON:0009854!4.02e-27!23;UBERON:0007499!6.95e-25!25;UBERON:0009497!6.95e-25!25;UBERON:0000015!6.95e-25!25;UBERON:0002423!6.95e-25!25;UBERON:0006235!6.95e-25!25;UBERON:0004161!6.95e-25!25;UBERON:0005057!6.79e-24!26;UBERON:0009856!6.79e-24!26;UBERON:0005172!2.28e-20!55;UBERON:0005173!2.28e-20!55;UBERON:0002365!6.73e-20!31;UBERON:0002330!6.73e-20!31;UBERON:0002417!3.30e-18!61;UBERON:0000916!3.30e-18!61;UBERON:0002368!1.60e-17!35;UBERON:0003929!3.11e-17!54;UBERON:0000949!2.02e-13!45;UBERON:0002530!1.21e-12!59;UBERON:0004911!6.00e-11!1;UBERON:0005911!7.30e-11!82;UBERON:0005177!1.12e-09!107;UBERON:0009569!4.47e-09!113;UBERON:0000466!5.88e-08!126;UBERON:0004921!1.00e-07!129;UBERON:0004185!1.00e-07!129;UBERON:0003914!4.48e-07!118;UBERON:0005256!7.75e-07!143 | |ontology_enrichment_uberon=UBERON:0002107!5.24e-33!19;UBERON:0006925!5.24e-33!19;UBERON:0008836!5.24e-33!19;UBERON:0008835!2.15e-28!22;UBERON:0003894!2.15e-28!22;UBERON:0009854!4.02e-27!23;UBERON:0007499!6.95e-25!25;UBERON:0009497!6.95e-25!25;UBERON:0000015!6.95e-25!25;UBERON:0002423!6.95e-25!25;UBERON:0006235!6.95e-25!25;UBERON:0004161!6.95e-25!25;UBERON:0005057!6.79e-24!26;UBERON:0009856!6.79e-24!26;UBERON:0005172!2.28e-20!55;UBERON:0005173!2.28e-20!55;UBERON:0002365!6.73e-20!31;UBERON:0002330!6.73e-20!31;UBERON:0002417!3.30e-18!61;UBERON:0000916!3.30e-18!61;UBERON:0002368!1.60e-17!35;UBERON:0003929!3.11e-17!54;UBERON:0000949!2.02e-13!45;UBERON:0002530!1.21e-12!59;UBERON:0004911!6.00e-11!1;UBERON:0005911!7.30e-11!82;UBERON:0005177!1.12e-09!107;UBERON:0009569!4.47e-09!113;UBERON:0000466!5.88e-08!126;UBERON:0004921!1.00e-07!129;UBERON:0004185!1.00e-07!129;UBERON:0003914!4.48e-07!118;UBERON:0005256!7.75e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.62e-33;19!UBERON:0006925;6.62e-33;19!UBERON:0002423;4.07e-25;25!UBERON:0002365;2.82e-20;31!UBERON:0002330;2.82e-20;31!UBERON:0002368;1.52e-17;33!UBERON:0000949;9.65e-13;43!UBERON:0005172;3.26e-09;52!UBERON:0005173;3.26e-09;52!UBERON:0001007;4.75e-09;81!UBERON:0001242;1.98e-07;4!UBERON:0001262;1.98e-07;4!UBERON:0004786;1.98e-07;4!UBERON:0004808;1.98e-07;4!UBERON:0001277;1.98e-07;4!UBERON:0002417;3.66e-07;58!UBERON:0000916;3.66e-07;58!UBERON:0002530;9.25e-07;57 | |ontology_enrichment_uberon_v019=UBERON:0002107;6.62e-33;19!UBERON:0006925;6.62e-33;19!UBERON:0002423;4.07e-25;25!UBERON:0002365;2.82e-20;31!UBERON:0002330;2.82e-20;31!UBERON:0002368;1.52e-17;33!UBERON:0000949;9.65e-13;43!UBERON:0005172;3.26e-09;52!UBERON:0005173;3.26e-09;52!UBERON:0001007;4.75e-09;81!UBERON:0001242;1.98e-07;4!UBERON:0001262;1.98e-07;4!UBERON:0004786;1.98e-07;4!UBERON:0004808;1.98e-07;4!UBERON:0001277;1.98e-07;4!UBERON:0002417;3.66e-07;58!UBERON:0000916;3.66e-07;58!UBERON:0002530;9.25e-07;57 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.62e-33,19;UBERON:0006925,6.62e-33,19;UBERON:0008836,6.62e-33,19;UBERON:0008835,1.76e-28,22;UBERON:0003894,1.76e-28,22;UBERON:0009854,2.91e-27,23;UBERON:0007499,4.07e-25,25;UBERON:0009497,4.07e-25,25;UBERON:0000015,4.07e-25,25;UBERON:0002423,4.07e-25,25;UBERON:0006235,4.07e-25,25;UBERON:0004161,4.07e-25,25;UBERON:0009856,3.63e-24,26;UBERON:0002365,2.48e-20,31;UBERON:0002330,2.48e-20,31;UBERON:0002368,4.75e-18,35;UBERON:0003929,1.15e-16,54;UBERON:0000949,4.14e-14,45;UBERON:0005172,8.40e-12,54;UBERON:0005173,8.40e-12,54;UBERON:0005911,5.08e-11,82;UBERON:0002530,8.02e-11,59;UBERON:0002417,1.20e-10,60;UBERON:0000916,1.20e-10,60;UBERON:0004921,1.33e-07,118;UBERON:0001242,2.04e-07,4;UBERON:0001262,2.04e-07,4;UBERON:0004786,2.04e-07,4;UBERON:0004808,2.04e-07,4;UBERON:0001277,2.04e-07,4;UBERON:0001041,2.13e-07,87 | |||
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|short_description=p8@FGB | |short_description=p8@FGB | ||
}} | }} |
Latest revision as of 06:26, 16 September 2015
Short description: | p8@FGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FGB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 67bp_to_J00133_5end |
EntrezGene: | FGB |
HGNC: | 3662 |
UniProt: | P02675 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.87e-19 | 12 |
intestinal epithelial cell | 2.04e-07 | 4 |
endodermal cell | 2.72e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 6.62e-33 | 19 |
digestive gland | 6.62e-33 | 19 |
liver bud | 6.62e-33 | 19 |
hepatic diverticulum | 1.76e-28 | 22 |
liver primordium | 1.76e-28 | 22 |
digestive tract diverticulum | 2.91e-27 | 23 |
epithelial sac | 4.07e-25 | 25 |
epithelium of foregut-midgut junction | 4.07e-25 | 25 |
anatomical boundary | 4.07e-25 | 25 |
hepatobiliary system | 4.07e-25 | 25 |
foregut-midgut junction | 4.07e-25 | 25 |
septum transversum | 4.07e-25 | 25 |
sac | 3.63e-24 | 26 |
exocrine gland | 2.48e-20 | 31 |
exocrine system | 2.48e-20 | 31 |
endocrine gland | 4.75e-18 | 35 |
gut epithelium | 1.15e-16 | 54 |
endocrine system | 4.14e-14 | 45 |
abdomen element | 8.40e-12 | 54 |
abdominal segment element | 8.40e-12 | 54 |
endo-epithelium | 5.08e-11 | 82 |
gland | 8.02e-11 | 59 |
abdominal segment of trunk | 1.20e-10 | 60 |
abdomen | 1.20e-10 | 60 |
subdivision of digestive tract | 1.33e-07 | 118 |
intestinal mucosa | 2.04e-07 | 4 |
wall of intestine | 2.04e-07 | 4 |
gastrointestinal system mucosa | 2.04e-07 | 4 |
gastrointestinal system epithelium | 2.04e-07 | 4 |
intestinal epithelium | 2.04e-07 | 4 |
foregut | 2.13e-07 | 87 |