FFCP PHASE1:Hg19::chr14:77951201..77951226,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=145501 | |EntrezGene=145501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=23176 | |HGNC=23176 | ||
|TSSclassifier=strong | |||
|UniProt=Q6H9L7 | |UniProt=Q6H9L7 | ||
|association_with_transcript=17bp_to_BC033140_5end | |association_with_transcript=17bp_to_BC033140_5end | ||
|cluster_id=chr14:77951201..77951226,- | |||
|coexpression_cluster_id=C533 | |coexpression_cluster_id=C533 | ||
|description=CAGE_peak_4_at_ISM2_5end | |description=CAGE_peak_4_at_ISM2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!1.17e-31!3;CL:0000181!6.27e-08!12;CL:0000417!6.27e-08!12;CL:0000668!6.27e-08!12;CL:0000414!6.27e-08!12;CL:0000412!6.27e-08!12;CL:0000182!6.27e-08!12 | |ontology_enrichment_celltype=CL:0002541!1.17e-31!3;CL:0000181!6.27e-08!12;CL:0000417!6.27e-08!12;CL:0000668!6.27e-08!12;CL:0000414!6.27e-08!12;CL:0000412!6.27e-08!12;CL:0000182!6.27e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002541;4.06e-99;3!CL:0000349;2.58e-28;19!CL:0000723;5.37e-09;61!CL:0000134;2.33e-08;55!CL:0002537;7.25e-08;5 | |ontology_enrichment_celltype_v019=CL:0002541;4.06e-99;3!CL:0000349;2.58e-28;19!CL:0000723;5.37e-09;61!CL:0000134;2.33e-08;55!CL:0002537;7.25e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.06e-99,3;CL:0000349,2.67e-28,19;CL:0002537,7.49e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.34e-34;1 | |ontology_enrichment_development_v019=UBERON:0003124;8.34e-34;1 | ||
|ontology_enrichment_disease=DOID:1799!1.97e-11!1;DOID:10165!1.97e-11!1;DOID:1798!1.97e-11!1;DOID:170!1.17e-07!6 | |ontology_enrichment_disease=DOID:1799!1.97e-11!1;DOID:10165!1.97e-11!1;DOID:1798!1.97e-11!1;DOID:170!1.17e-07!6 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!1.17e-31!3;UBERON:0000920!1.17e-31!3;UBERON:0003124!7.50e-24!7;UBERON:0005631!2.61e-18!14;UBERON:0000158!2.61e-18!14;UBERON:0000478!1.23e-10!24 | |ontology_enrichment_uberon=UBERON:0000476!1.17e-31!3;UBERON:0000920!1.17e-31!3;UBERON:0003124!7.50e-24!7;UBERON:0005631!2.61e-18!14;UBERON:0000158!2.61e-18!14;UBERON:0000478!1.23e-10!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.06e-99;3!UBERON:0000920;4.06e-99;3!UBERON:0005631;4.93e-53;10!UBERON:0000158;4.93e-53;10!UBERON:0000478;1.20e-34;24!UBERON:0001987;1.63e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0003124;4.06e-99;3!UBERON:0000920;4.06e-99;3!UBERON:0005631;4.93e-53;10!UBERON:0000158;4.93e-53;10!UBERON:0000478;1.20e-34;24!UBERON:0001987;1.63e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.06e-99,3;UBERON:0003124,2.17e-75,7;UBERON:0005631,7.71e-59,14;UBERON:0000158,7.71e-59,14;UBERON:0000478,1.20e-34,24;UBERON:0004923,5.70e-13,66;UBERON:0001987,1.57e-09,4;UBERON:0004340,1.57e-09,4 | |||
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|short_description=p4@ISM2 | |short_description=p4@ISM2 | ||
}} | }} |
Latest revision as of 06:23, 16 September 2015
Short description: | p4@ISM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ISM2_5end |
Coexpression cluster: | C533_chorionic_amniotic_pancreatic_placenta_choriocarcinoma_Placental_mesothelioma |
Association with transcript: | 17bp_to_BC033140_5end |
EntrezGene: | ISM2 |
HGNC: | 23176 |
UniProt: | Q6H9L7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.06e-99 | 3 |
extraembryonic cell | 2.67e-28 | 19 |
amnion mesenchymal stem cell | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.06e-99 | 3 |
chorion | 2.17e-75 | 7 |
extraembryonic membrane | 7.71e-59 | 14 |
membranous layer | 7.71e-59 | 14 |
extraembryonic structure | 1.20e-34 | 24 |
organ component layer | 5.70e-13 | 66 |
placenta | 1.57e-09 | 4 |
allantois | 1.57e-09 | 4 |