FFCP PHASE1:Hg19::chr12:109554408..109554419,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=32 | |EntrezGene=32 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=85 | |HGNC=85 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000338432,uc001tob.2_5end | |association_with_transcript=8bp_to_ENST00000338432,uc001tob.2_5end | ||
|cluster_id=chr12:109554408..109554419,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_13_at_ACACB_5end | |description=CAGE_peak_13_at_ACACB_5end | ||
|id=chr12:109554408..109554419,+ | |id=chr12:109554408..109554419,+ | ||
|ontology_enrichment_celltype=CL:0000136!4.23e-16!15 | |ontology_enrichment_celltype=CL:0000136!4.23e-16!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.07e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.81e-10,15 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.24e-11;1!UBERON:0010226;4.58e-11;1!UBERON:0010227;5.30e-11;1!UBERON:0000358;7.45e-11;1!UBERON:0005062;9.99e-11;4!UBERON:0007284;9.99e-11;4!UBERON:0004874;1.33e-10;1 | |||
|ontology_enrichment_disease=DOID:114!6.92e-10!2 | |ontology_enrichment_disease=DOID:114!6.92e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:114;8.92e-21;2!DOID:178;3.24e-11;1!DOID:326;3.24e-11;1!DOID:3978;3.24e-11;1!DOID:3394;3.24e-11;1!DOID:5844;3.24e-11;1!DOID:1287;7.29e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.49e-21,2;DOID:178,3.08e-11,1;DOID:326,3.08e-11,1;DOID:3978,3.08e-11,1;DOID:3394,3.08e-11,1;DOID:5844,3.08e-11,1;DOID:1287,7.11e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-20!115;UBERON:0001630!1.06e-09!2;UBERON:0005090!1.06e-09!2;UBERON:0007100!5.13e-09!27;UBERON:0003103!2.52e-07!69;UBERON:0003978!9.35e-07!3;UBERON:0009751!9.35e-07!3;UBERON:0000946!9.35e-07!3;UBERON:0002523!9.35e-07!3;UBERON:0005983!9.35e-07!3;UBERON:0002165!9.35e-07!3;UBERON:0002062!9.35e-07!3;UBERON:0007280!9.35e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.13e-20!115;UBERON:0001630!1.06e-09!2;UBERON:0005090!1.06e-09!2;UBERON:0007100!5.13e-09!27;UBERON:0003103!2.52e-07!69;UBERON:0003978!9.35e-07!3;UBERON:0009751!9.35e-07!3;UBERON:0000946!9.35e-07!3;UBERON:0002523!9.35e-07!3;UBERON:0005983!9.35e-07!3;UBERON:0002165!9.35e-07!3;UBERON:0002062!9.35e-07!3;UBERON:0007280!9.35e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.91e-24;25!UBERON:0005090;2.26e-20;2!UBERON:0001630;2.26e-20;2!UBERON:0003978;5.37e-14;3!UBERON:0000946;5.37e-14;3!UBERON:0004151;7.19e-14;3!UBERON:0001389;2.79e-11;1!UBERON:0000026;2.79e-11;1!UBERON:0008784;2.79e-11;1!UBERON:0006058;2.79e-11;1!UBERON:0003663;2.79e-11;1!UBERON:0004256;2.79e-11;1!UBERON:0004708;2.79e-11;1!UBERON:0002101;2.79e-11;1!UBERON:0004709;2.79e-11;1!UBERON:0002529;2.79e-11;1!UBERON:0010538;2.79e-11;1!UBERON:0003661;2.79e-11;1!UBERON:0010890;2.79e-11;1!UBERON:0002471;2.79e-11;1!UBERON:0001383;2.79e-11;1!UBERON:0010758;2.79e-11;1!UBERON:0010707;2.79e-11;1!UBERON:0000978;2.79e-11;1!UBERON:0002103;2.79e-11;1!UBERON:0001665;2.79e-11;1!UBERON:0003823;2.79e-11;1!UBERON:0000154;2.79e-11;1!UBERON:0010709;2.79e-11;1!UBERON:0002146;3.76e-11;1!UBERON:0005623;3.76e-11;1!UBERON:0002135;4.15e-11;1!UBERON:0002084;4.58e-11;1!UBERON:0002082;4.58e-11;1!UBERON:0002079;5.30e-11;1!UBERON:0000948;5.85e-11;22!UBERON:0002426;7.45e-11;1!UBERON:0003831;7.45e-11;1!UBERON:0003898;7.45e-11;1!UBERON:0004830;7.45e-11;1!UBERON:0003830;7.45e-11;1!UBERON:0005175;7.45e-11;1!UBERON:0001774;7.45e-11;1!UBERON:0001103;7.45e-11;1!UBERON:0000989;1.33e-10;1!UBERON:0008811;1.33e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.12e-22,27;UBERON:0005090,2.26e-20,2;UBERON:0001630,2.26e-20,2;UBERON:0003978,5.37e-14,3;UBERON:0009751,5.37e-14,3;UBERON:0000946,5.37e-14,3;UBERON:0002523,5.37e-14,3;UBERON:0005983,5.37e-14,3;UBERON:0002165,5.37e-14,3;UBERON:0002062,5.37e-14,3;UBERON:0007280,5.37e-14,3;UBERON:0004151,7.42e-14,3;UBERON:0007023,3.80e-12,114;UBERON:0005418,2.79e-11,1;UBERON:0001389,2.79e-11,1;UBERON:0000026,2.79e-11,1;UBERON:0008784,2.79e-11,1;UBERON:0006058,2.79e-11,1;UBERON:0003663,2.79e-11,1;UBERON:0004256,2.79e-11,1;UBERON:0004708,2.79e-11,1;UBERON:0002101,2.79e-11,1;UBERON:0004709,2.79e-11,1;UBERON:0002529,2.79e-11,1;UBERON:0010538,2.79e-11,1;UBERON:0003661,2.79e-11,1;UBERON:0010890,2.79e-11,1;UBERON:0002471,2.79e-11,1;UBERON:0001383,2.79e-11,1;UBERON:0004357,2.79e-11,1;UBERON:0004347,2.79e-11,1;UBERON:0005420,2.79e-11,1;UBERON:0005732,2.79e-11,1;UBERON:0010758,2.79e-11,1;UBERON:0010707,2.79e-11,1;UBERON:0000978,2.79e-11,1;UBERON:0002103,2.79e-11,1;UBERON:0001665,2.79e-11,1;UBERON:0003823,2.79e-11,1;UBERON:0000154,2.79e-11,1;UBERON:0010709,2.79e-11,1;UBERON:0005733,2.79e-11,1;UBERON:0005730,2.79e-11,1;UBERON:0002146,3.76e-11,1;UBERON:0005623,3.76e-11,1;UBERON:0002135,4.15e-11,1;UBERON:0002084,4.58e-11,1;UBERON:0002082,4.58e-11,1;UBERON:0010226,4.58e-11,1;UBERON:0002079,5.57e-11,1;UBERON:0002426,7.46e-11,1;UBERON:0003831,7.46e-11,1;UBERON:0003898,7.46e-11,1;UBERON:0004830,7.46e-11,1;UBERON:0003830,7.46e-11,1;UBERON:0005175,7.46e-11,1;UBERON:0001774,7.46e-11,1;UBERON:0001103,7.46e-11,1;UBERON:0010084,7.46e-11,1;UBERON:0000989,1.21e-10,1;UBERON:0008811,1.21e-10,1;UBERON:0006258,1.21e-10,1;UBERON:0005876,1.21e-10,1;UBERON:0004874,1.21e-10,1;UBERON:0003103,2.56e-10,68;UBERON:0000948,5.03e-10,24;UBERON:0005498,5.03e-10,24;UBERON:0004140,5.03e-10,24;UBERON:0009881,5.03e-10,24;UBERON:0004141,5.03e-10,24;UBERON:0003084,5.03e-10,24;UBERON:0007005,5.03e-10,24;UBERON:0004139,5.03e-10,24;UBERON:0004291,5.03e-10,24 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7027776305341,7.33313356837388,0,8.9855550224546,15.8813637810531,3.79391477651183,8.59948447830096,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.157363764404994,0,0,0,3.57347663186684,4.63464379255802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,1.0027595760908,1.22538230705385,2.95085367638824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,2.14280734351315,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.06400372063053,2.56657017140618,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.49263787330687,0,0,0,0,0.190941474834495,0,1.52401723527873,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | |phase1_expression=0,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7027776305341,7.33313356837388,0,8.9855550224546,15.8813637810531,3.79391477651183,8.59948447830096,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.157363764404994,0,0,0,3.57347663186684,4.63464379255802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,1.0027595760908,1.22538230705385,2.95085367638824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,2.14280734351315,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.06400372063053,2.56657017140618,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.49263787330687,0,0,0,0,0.190941474834495,0,1.52401723527873,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | ||
|short_description=p13@ACACB | |short_description=p13@ACACB | ||
}} | }} |
Latest revision as of 06:22, 16 September 2015
Short description: | p13@ACACB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ACACB_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 8bp_to_ENST00000338432, uc001tob.2_5end |
EntrezGene: | ACACB |
HGNC: | 85 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.81e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.49e-21 | 2 |
vascular disease | 3.08e-11 | 1 |
ischemia | 3.08e-11 | 1 |
extrinsic cardiomyopathy | 3.08e-11 | 1 |
myocardial ischemia | 3.08e-11 | 1 |
myocardial infarction | 3.08e-11 | 1 |
cardiovascular system disease | 7.11e-11 | 4 |