FFCP PHASE1:Hg19::chrX:65382622..65382653,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9843 | |EntrezGene=9843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4866 | |HGNC=4866 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_uc011moz.1_5end | |association_with_transcript=-9bp_to_uc011moz.1_5end | ||
|cluster_id=chrX:65382622..65382653,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_3_at_HEPH_5end | |description=CAGE_peak_3_at_HEPH_5end | ||
|id=chrX:65382622..65382653,+ | |id=chrX:65382622..65382653,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.36e-09!4 | |ontology_enrichment_celltype=CL:0002563!2.36e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0002563;6.26e-15;4!CL:0002253;3.08e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.04e-15,4;CL:0002253,3.08e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.75e-15;1 | |||
|ontology_enrichment_disease=DOID:178!1.91e-09!1;DOID:326!1.91e-09!1;DOID:3978!1.91e-09!1;DOID:3394!1.91e-09!1;DOID:5844!1.91e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!5.12e-37!11;UBERON:0000160!5.72e-35!27;UBERON:0004907!5.26e-27!5;UBERON:0005409!8.26e-27!35;UBERON:0001155!1.35e-23!9;UBERON:0001052!1.90e-19!4;UBERON:0001046!6.56e-11!19;UBERON:0004921!2.78e-10!129;UBERON:0004185!2.78e-10!129;UBERON:0001154!9.70e-10!1;UBERON:0001153!9.70e-10!1;UBERON:0001007!1.62e-09!155;UBERON:0001555!1.62e-09!155;UBERON:0007026!1.62e-09!155;UBERON:0001242!2.36e-09!4;UBERON:0001262!2.36e-09!4;UBERON:0004786!2.36e-09!4;UBERON:0004808!2.36e-09!4;UBERON:0001277!2.36e-09!4;UBERON:0004119!1.64e-08!169;UBERON:0000925!1.64e-08!169;UBERON:0006595!1.64e-08!169;UBERON:0003350!1.19e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.29e-77;17!UBERON:0005409;1.35e-60;22!UBERON:0000059;5.02e-46;11!UBERON:0001155;2.58e-39;9!UBERON:0004921;3.31e-36;33!UBERON:0002108;1.53e-26;4!UBERON:0004907;9.27e-26;5!UBERON:0001154;2.75e-15;1!UBERON:0001153;2.75e-15;1!UBERON:0009854;2.75e-15;1!UBERON:0001052;5.24e-15;4!UBERON:0001242;6.26e-15;4!UBERON:0001262;6.26e-15;4!UBERON:0004786;6.26e-15;4!UBERON:0004808;6.26e-15;4!UBERON:0001277;6.26e-15;4!UBERON:0001555;1.87e-13;54!UBERON:0001007;1.79e-11;81!UBERON:0000485;6.18e-09;7!UBERON:0003929;6.18e-09;7!UBERON:0003350;6.29e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.23e-77,17;UBERON:0005409,1.56e-53,25;UBERON:0000059,5.02e-46,11;UBERON:0001155,2.58e-39,9;UBERON:0002108,1.53e-26,4;UBERON:0004907,9.27e-26,5;UBERON:0004921,5.86e-16,118;UBERON:0001154,2.75e-15,1;UBERON:0001153,2.75e-15,1;UBERON:0001045,2.75e-15,1;UBERON:0001052,5.24e-15,4;UBERON:0001242,6.04e-15,4;UBERON:0001262,6.04e-15,4;UBERON:0004786,6.04e-15,4;UBERON:0004808,6.04e-15,4;UBERON:0001277,6.04e-15,4;UBERON:0001007,8.93e-13,145;UBERON:0001555,8.93e-13,145;UBERON:0007026,8.93e-13,145;UBERON:0001046,4.29e-12,19;UBERON:0004119,1.83e-11,160;UBERON:0000925,1.83e-11,160;UBERON:0006595,1.83e-11,160;UBERON:0011216,2.91e-09,223;UBERON:0003350,6.18e-08,8;UBERON:0000485,3.78e-07,9 | |||
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|short_description=p3@HEPH | |short_description=p3@HEPH | ||
}} | }} |
Latest revision as of 04:58, 16 September 2015
Short description: | p3@HEPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HEPH_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -9bp_to_uc011moz.1_5end |
EntrezGene: | HEPH |
HGNC: | 4866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.04e-15 | 4 |
epithelial cell of large intestine | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.23e-77 | 17 |
gastrointestinal system | 1.56e-53 | 25 |
large intestine | 5.02e-46 | 11 |
colon | 2.58e-39 | 9 |
small intestine | 1.53e-26 | 4 |
lower digestive tract | 9.27e-26 | 5 |
subdivision of digestive tract | 5.86e-16 | 118 |
vermiform appendix | 2.75e-15 | 1 |
caecum | 2.75e-15 | 1 |
midgut | 2.75e-15 | 1 |
rectum | 5.24e-15 | 4 |
intestinal mucosa | 6.04e-15 | 4 |
wall of intestine | 6.04e-15 | 4 |
gastrointestinal system mucosa | 6.04e-15 | 4 |
gastrointestinal system epithelium | 6.04e-15 | 4 |
intestinal epithelium | 6.04e-15 | 4 |
digestive system | 8.93e-13 | 145 |
digestive tract | 8.93e-13 | 145 |
primitive gut | 8.93e-13 | 145 |
hindgut | 4.29e-12 | 19 |
endoderm-derived structure | 1.83e-11 | 160 |
endoderm | 1.83e-11 | 160 |
presumptive endoderm | 1.83e-11 | 160 |
organ system subdivision | 2.91e-09 | 223 |
epithelium of mucosa | 6.18e-08 | 8 |
simple columnar epithelium | 3.78e-07 | 9 |