FFCP PHASE1:Hg19::chrX:65382591..65382602,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9843 | |EntrezGene=9843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4866 | |HGNC=4866 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-60bp_to_uc011moz.1_5end | |||
|cluster_id=chrX:65382591..65382602,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_9_at_HEPH_5end | |||
|id=chrX:65382591..65382602,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.33e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0002563;5.43e-15;4!CL:0002253;2.77e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.88e-15,4;CL:0002253,2.67e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.95e-15;1 | |||
|ontology_enrichment_disease=DOID:1036!1.98e-24!8;DOID:8692!3.58e-15!31;DOID:1240!7.51e-12!39;DOID:2531!8.09e-09!51;DOID:0060083!8.09e-09!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!2.18e-35!11;UBERON:0000160!1.85e-33!27;UBERON:0004907!5.13e-26!5;UBERON:0005409!1.26e-25!35;UBERON:0001155!1.61e-22!9;UBERON:0001052!8.37e-19!4;UBERON:0001046!1.56e-10!19;UBERON:0001154!2.35e-09!1;UBERON:0001153!2.35e-09!1;UBERON:0001242!4.33e-09!4;UBERON:0001262!4.33e-09!4;UBERON:0004786!4.33e-09!4;UBERON:0004808!4.33e-09!4;UBERON:0001277!4.33e-09!4;UBERON:0003350!1.95e-07!5;UBERON:0004921!5.67e-07!129;UBERON:0004185!5.67e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.43e-63;17!UBERON:0005409;3.59e-49;22!UBERON:0000059;3.11e-32;11!UBERON:0004921;2.18e-29;33!UBERON:0002108;1.34e-26;4!UBERON:0004907;7.18e-26;5!UBERON:0001155;1.74e-25;9!UBERON:0001154;2.95e-15;1!UBERON:0001153;2.95e-15;1!UBERON:0009854;2.95e-15;1!UBERON:0001052;4.09e-15;4!UBERON:0001242;5.43e-15;4!UBERON:0001262;5.43e-15;4!UBERON:0004786;5.43e-15;4!UBERON:0004808;5.43e-15;4!UBERON:0001277;5.43e-15;4!UBERON:0001555;8.88e-12;54!UBERON:0000485;5.70e-09;7!UBERON:0003929;5.70e-09;7!UBERON:0001007;6.21e-09;81!UBERON:0003350;5.86e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.63e-63,17;UBERON:0005409,2.05e-43,25;UBERON:0000059,3.31e-32,11;UBERON:0002108,1.40e-26,4;UBERON:0004907,7.82e-26,5;UBERON:0001155,1.86e-25,9;UBERON:0001154,3.66e-15,1;UBERON:0001153,3.66e-15,1;UBERON:0001045,3.66e-15,1;UBERON:0001052,3.94e-15,4;UBERON:0001242,4.88e-15,4;UBERON:0001262,4.88e-15,4;UBERON:0004786,4.88e-15,4;UBERON:0004808,4.88e-15,4;UBERON:0001277,4.88e-15,4;UBERON:0001046,3.49e-12,19;UBERON:0004921,5.69e-11,118;UBERON:0001007,9.74e-09,145;UBERON:0001555,9.74e-09,145;UBERON:0007026,9.74e-09,145;UBERON:0003350,5.56e-08,8;UBERON:0004119,8.11e-08,160;UBERON:0000925,8.11e-08,160;UBERON:0006595,8.11e-08,160;UBERON:0000485,3.45e-07,9 | |||
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|short_description=p9@HEPH | |||
}} | }} |
Latest revision as of 04:58, 16 September 2015
Short description: | p9@HEPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HEPH_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -60bp_to_uc011moz.1_5end |
EntrezGene: | HEPH |
HGNC: | 4866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.88e-15 | 4 |
epithelial cell of large intestine | 2.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.63e-63 | 17 |
gastrointestinal system | 2.05e-43 | 25 |
large intestine | 3.31e-32 | 11 |
small intestine | 1.40e-26 | 4 |
lower digestive tract | 7.82e-26 | 5 |
colon | 1.86e-25 | 9 |
vermiform appendix | 3.66e-15 | 1 |
caecum | 3.66e-15 | 1 |
midgut | 3.66e-15 | 1 |
rectum | 3.94e-15 | 4 |
intestinal mucosa | 4.88e-15 | 4 |
wall of intestine | 4.88e-15 | 4 |
gastrointestinal system mucosa | 4.88e-15 | 4 |
gastrointestinal system epithelium | 4.88e-15 | 4 |
intestinal epithelium | 4.88e-15 | 4 |
hindgut | 3.49e-12 | 19 |
subdivision of digestive tract | 5.69e-11 | 118 |
digestive system | 9.74e-09 | 145 |
digestive tract | 9.74e-09 | 145 |
primitive gut | 9.74e-09 | 145 |
epithelium of mucosa | 5.56e-08 | 8 |
endoderm-derived structure | 8.11e-08 | 160 |
endoderm | 8.11e-08 | 160 |
presumptive endoderm | 8.11e-08 | 160 |
simple columnar epithelium | 3.45e-07 | 9 |