FFCP PHASE1:Hg19::chrX:65382506..65382520,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9843 | |EntrezGene=9843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4866 | |HGNC=4866 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQS7,E9PHN8 | |UniProt=Q9BQS7,E9PHN8 | ||
|association_with_transcript=73bp_to_ENST00000374727,NM_138737_5end | |association_with_transcript=73bp_to_ENST00000374727,NM_138737_5end | ||
|cluster_id=chrX:65382506..65382520,+ | |||
|coexpression_cluster_id=C93 | |coexpression_cluster_id=C93 | ||
|description=CAGE_peak_5_at_HEPH_5end | |description=CAGE_peak_5_at_HEPH_5end | ||
|id=chrX:65382506..65382520,+ | |id=chrX:65382506..65382520,+ | ||
|ontology_enrichment_celltype=CL:0000763!6.05e-09!112;CL:0000049!6.05e-09!112;CL:0002032!6.85e-07!165;CL:0000837!6.85e-07!165;CL:0002563!9.94e-07!4 | |ontology_enrichment_celltype=CL:0000763!6.05e-09!112;CL:0000049!6.05e-09!112;CL:0002032!6.85e-07!165;CL:0000837!6.85e-07!165;CL:0002563!9.94e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002563;2.48e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,8.28e-10,108;CL:0000049,8.28e-10,108;CL:0002563,2.30e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006242;9.91e-09;1 | |||
|ontology_enrichment_disease=DOID:8692!7.39e-41!31;DOID:1036!1.56e-36!8;DOID:1240!7.85e-32!39;DOID:2531!1.34e-23!51;DOID:0060083!1.34e-23!51;DOID:0050686!2.73e-10!137;DOID:8552!3.85e-07!1;DOID:9119!5.50e-07!1;DOID:162!9.04e-07!235 | |ontology_enrichment_disease=DOID:8692!7.39e-41!31;DOID:1036!1.56e-36!8;DOID:1240!7.85e-32!39;DOID:2531!1.34e-23!51;DOID:0060083!1.34e-23!51;DOID:0050686!2.73e-10!137;DOID:8552!3.85e-07!1;DOID:9119!5.50e-07!1;DOID:162!9.04e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:8692;6.68e-40;31!DOID:1036;3.63e-35;8!DOID:1240;7.90e-25;39!DOID:2531;1.09e-15;51!DOID:0060083;1.09e-15;51!DOID:8552;9.91e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.22e-40,31;DOID:1036,3.85e-35,8;DOID:1240,1.25e-31,39;DOID:2531,1.22e-23,51;DOID:0060083,1.22e-23,51;DOID:0050686,6.23e-10,137;DOID:8552,9.17e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000160!2.27e-19!27;UBERON:0000059!8.87e-19!11;UBERON:0001155!3.36e-16!9;UBERON:0005409!1.13e-14!35;UBERON:0004907!4.96e-11!5;UBERON:0001154!5.19e-07!1;UBERON:0001153!5.19e-07!1;UBERON:0001052!8.85e-07!4;UBERON:0001242!9.94e-07!4;UBERON:0001262!9.94e-07!4;UBERON:0004786!9.94e-07!4;UBERON:0004808!9.94e-07!4;UBERON:0001277!9.94e-07!4 | |ontology_enrichment_uberon=UBERON:0000160!2.27e-19!27;UBERON:0000059!8.87e-19!11;UBERON:0001155!3.36e-16!9;UBERON:0005409!1.13e-14!35;UBERON:0004907!4.96e-11!5;UBERON:0001154!5.19e-07!1;UBERON:0001153!5.19e-07!1;UBERON:0001052!8.85e-07!4;UBERON:0001242!9.94e-07!4;UBERON:0001262!9.94e-07!4;UBERON:0004786!9.94e-07!4;UBERON:0004808!9.94e-07!4;UBERON:0001277!9.94e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;8.66e-33;17!UBERON:0005409;2.18e-25;22!UBERON:0000059;4.02e-17;11!UBERON:0004921;6.58e-15;33!UBERON:0002108;1.56e-14;4!UBERON:0001155;1.02e-13;9!UBERON:0001052;1.94e-08;4!UBERON:0001242;2.48e-08;4!UBERON:0001262;2.48e-08;4!UBERON:0004786;2.48e-08;4!UBERON:0004808;2.48e-08;4!UBERON:0001277;2.48e-08;4!UBERON:0004907;6.47e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.34e-33,17;UBERON:0005409,2.53e-22,25;UBERON:0000059,4.23e-17,11;UBERON:0002108,1.52e-14,4;UBERON:0001155,1.05e-13,9;UBERON:0001052,1.98e-08,4;UBERON:0001242,2.30e-08,4;UBERON:0001262,2.30e-08,4;UBERON:0004786,2.30e-08,4;UBERON:0004808,2.30e-08,4;UBERON:0001277,2.30e-08,4;UBERON:0004907,6.56e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65890789101569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.9284931435788,0,0,0,0,0,0,0,4.9094615562465,0,0,0,0,0,0,0,0,5.84652965180009,17.2322358526797,21.0955429211267,0.33307196799782,18.3283106614204,4.86565405061372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41282230755522,1.82832850090172,23.2363530435696,24.3117542553997,31.8861015254101,29.9810897704212,0.158936578980379,0,0,1.55488378577335,0,2.98578579323551,5.57282656371037,4.27721101453538,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.9786598245167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64353812307926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975343399858155,0,0,0,0,0,0,0,0,0.219881033490858,0,10.1098147121408,5.68254857310289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65890789101569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.9284931435788,0,0,0,0,0,0,0,4.9094615562465,0,0,0,0,0,0,0,0,5.84652965180009,17.2322358526797,21.0955429211267,0.33307196799782,18.3283106614204,4.86565405061372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41282230755522,1.82832850090172,23.2363530435696,24.3117542553997,31.8861015254101,29.9810897704212,0.158936578980379,0,0,1.55488378577335,0,2.98578579323551,5.57282656371037,4.27721101453538,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.9786598245167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64353812307926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975343399858155,0,0,0,0,0,0,0,0,0.219881033490858,0,10.1098147121408,5.68254857310289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@HEPH | |short_description=p5@HEPH | ||
}} | }} |
Latest revision as of 04:57, 16 September 2015
Short description: | p5@HEPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HEPH_5end |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | 73bp_to_ENST00000374727, NM_138737_5end |
EntrezGene: | HEPH |
HGNC: | 4866 |
UniProt: | Q9BQS7E9PHN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 8.28e-10 | 108 |
common myeloid progenitor | 8.28e-10 | 108 |
intestinal epithelial cell | 2.30e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.34e-33 | 17 |
gastrointestinal system | 2.53e-22 | 25 |
large intestine | 4.23e-17 | 11 |
small intestine | 1.52e-14 | 4 |
colon | 1.05e-13 | 9 |
rectum | 1.98e-08 | 4 |
intestinal mucosa | 2.30e-08 | 4 |
wall of intestine | 2.30e-08 | 4 |
gastrointestinal system mucosa | 2.30e-08 | 4 |
gastrointestinal system epithelium | 2.30e-08 | 4 |
intestinal epithelium | 2.30e-08 | 4 |
lower digestive tract | 6.56e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.22e-40 | 31 |
chronic leukemia | 3.85e-35 | 8 |
leukemia | 1.25e-31 | 39 |
hematologic cancer | 1.22e-23 | 51 |
immune system cancer | 1.22e-23 | 51 |
organ system cancer | 6.23e-10 | 137 |
chronic myeloid leukemia | 9.17e-09 | 1 |