FFCP PHASE1:Hg19::chr8:127570706..127570729,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157638 | |EntrezGene=157638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24166 | |HGNC=24166 | ||
|TSSclassifier=strong | |||
|UniProt=Q96KN1 | |UniProt=Q96KN1 | ||
|association_with_transcript=0bp_to_NM_174911_5end | |association_with_transcript=0bp_to_NM_174911_5end | ||
|cluster_id=chr8:127570706..127570729,- | |||
|coexpression_cluster_id=C86 | |coexpression_cluster_id=C86 | ||
|description=CAGE_peak_2_at_FAM84B_5end | |description=CAGE_peak_2_at_FAM84B_5end | ||
|id=chr8:127570706..127570729,- | |id=chr8:127570706..127570729,- | ||
|ontology_enrichment_celltype=CL:0000066!1.01e-27!254;CL:1000449!7.41e-07!16 | |ontology_enrichment_celltype=CL:0000066!1.01e-27!254;CL:1000449!7.41e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000449;5.31e-09;15!CL:1000497;5.37e-08;17!CL:0002518;5.37e-08;17!CL:0002681;3.67e-07;12!CL:0002584;3.67e-07;12!CL:1000507;9.92e-07;10!CL:1000494;9.92e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.76e-24,253;CL:1000449,4.65e-09,15;CL:1000497,4.36e-08,17;CL:0002518,4.36e-08,17;CL:0002681,3.40e-07,12;CL:0002584,3.40e-07,12;CL:1000507,1.00e-06,10;CL:1000494,1.00e-06,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.68e-16!106;DOID:0050687!1.12e-14!143;DOID:299!2.22e-08!25 | |ontology_enrichment_disease=DOID:305!1.68e-16!106;DOID:0050687!1.12e-14!143;DOID:299!2.22e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:299;7.46e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.52e-14,106;DOID:0050687,3.21e-12,143;DOID:299,4.72e-09,25;DOID:1749,8.21e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000064!7.01e-11!219;UBERON:0005177!1.05e-08!107;UBERON:0000466!1.48e-08!126;UBERON:0000489!2.78e-08!32;UBERON:0002113!5.81e-08!27;UBERON:0003918!5.81e-08!27;UBERON:0005095!5.81e-08!27;UBERON:0007687!5.81e-08!27;UBERON:0000924!6.97e-08!173;UBERON:0006601!6.97e-08!173;UBERON:0000464!8.96e-08!104;UBERON:0007625!9.85e-08!11;UBERON:0000080!2.60e-07!18;UBERON:0002120!2.60e-07!18;UBERON:0004875!2.60e-07!18;UBERON:0005721!2.60e-07!18;UBERON:0005754!2.60e-07!18;UBERON:0007297!2.60e-07!18;UBERON:0000058!4.96e-07!26;UBERON:0006555!5.32e-07!17;UBERON:0005103!5.32e-07!17;UBERON:0000083!5.32e-07!17;UBERON:0009201!5.32e-07!17;UBERON:0004819!5.32e-07!17;UBERON:0006553!5.32e-07!17;UBERON:0003074!5.32e-07!17;UBERON:0003060!5.32e-07!17;UBERON:0002553!6.44e-07!70;UBERON:0004211!7.41e-07!16;UBERON:0001285!7.41e-07!16;UBERON:0007684!7.41e-07!16;UBERON:0003220!7.41e-07!16;UBERON:0004208!7.41e-07!16;UBERON:0004876!8.10e-07!20;UBERON:0004121!9.15e-07!169 | |ontology_enrichment_uberon=UBERON:0000064!7.01e-11!219;UBERON:0005177!1.05e-08!107;UBERON:0000466!1.48e-08!126;UBERON:0000489!2.78e-08!32;UBERON:0002113!5.81e-08!27;UBERON:0003918!5.81e-08!27;UBERON:0005095!5.81e-08!27;UBERON:0007687!5.81e-08!27;UBERON:0000924!6.97e-08!173;UBERON:0006601!6.97e-08!173;UBERON:0000464!8.96e-08!104;UBERON:0007625!9.85e-08!11;UBERON:0000080!2.60e-07!18;UBERON:0002120!2.60e-07!18;UBERON:0004875!2.60e-07!18;UBERON:0005721!2.60e-07!18;UBERON:0005754!2.60e-07!18;UBERON:0007297!2.60e-07!18;UBERON:0000058!4.96e-07!26;UBERON:0006555!5.32e-07!17;UBERON:0005103!5.32e-07!17;UBERON:0000083!5.32e-07!17;UBERON:0009201!5.32e-07!17;UBERON:0004819!5.32e-07!17;UBERON:0006553!5.32e-07!17;UBERON:0003074!5.32e-07!17;UBERON:0003060!5.32e-07!17;UBERON:0002553!6.44e-07!70;UBERON:0004211!7.41e-07!16;UBERON:0001285!7.41e-07!16;UBERON:0007684!7.41e-07!16;UBERON:0003220!7.41e-07!16;UBERON:0004208!7.41e-07!16;UBERON:0004876!8.10e-07!20;UBERON:0004121!9.15e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.31e-09;15!UBERON:0004819;5.31e-09;15!UBERON:0001285;5.31e-09;15!UBERON:0007684;5.31e-09;15!UBERON:0007625;5.82e-09;11!UBERON:0002113;6.80e-09;24!UBERON:0011143;6.80e-09;24!UBERON:0000489;3.18e-08;29!UBERON:0006554;6.24e-08;30!UBERON:0001008;6.24e-08;30!UBERON:0001225;3.67e-07;12!UBERON:0008987;3.67e-07;12!UBERON:0000353;8.97e-07;15!UBERON:0004211;9.92e-07;10!UBERON:0009773;9.92e-07;10!UBERON:0001231;9.92e-07;10!UBERON:0004810;9.92e-07;10 | |||
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| ||
|short_description=p2@FAM84B | |short_description=p2@FAM84B | ||
}} | }} |
Latest revision as of 04:30, 16 September 2015
Short description: | p2@FAM84B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM84B_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | 0bp_to_NM_174911_5end |
EntrezGene: | FAM84B |
HGNC: | 24166 |
UniProt: | Q96KN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.76e-24 | 253 |
epithelial cell of nephron | 4.65e-09 | 15 |
kidney cell | 4.36e-08 | 17 |
kidney epithelial cell | 4.36e-08 | 17 |
kidney cortical cell | 3.40e-07 | 12 |
renal cortical epithelial cell | 3.40e-07 | 12 |
kidney tubule cell | 1.00e-06 | 10 |
nephron tubule epithelial cell | 1.00e-06 | 10 |
Ontology term | p-value | n |
---|---|---|
renal system | 6.33e-10 | 48 |
urinary system structure | 1.28e-09 | 47 |
kidney | 1.57e-09 | 26 |
kidney mesenchyme | 1.57e-09 | 26 |
upper urinary tract | 1.57e-09 | 26 |
kidney rudiment | 1.57e-09 | 26 |
kidney field | 1.57e-09 | 26 |
excretory tube | 3.40e-09 | 16 |
kidney epithelium | 3.40e-09 | 16 |
nephron epithelium | 4.65e-09 | 15 |
renal tubule | 4.65e-09 | 15 |
nephron tubule | 4.65e-09 | 15 |
nephron | 4.65e-09 | 15 |
uriniferous tubule | 4.65e-09 | 15 |
nephrogenic mesenchyme | 4.65e-09 | 15 |
cavitated compound organ | 6.96e-09 | 31 |
pigment epithelium of eye | 7.45e-09 | 11 |
trunk region element | 3.70e-08 | 101 |
cortex of kidney | 3.40e-07 | 12 |
renal parenchyma | 3.40e-07 | 12 |
parenchyma | 8.67e-07 | 15 |
nephron tubule epithelium | 1.00e-06 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.52e-14 | 106 |
cell type cancer | 3.21e-12 | 143 |
adenocarcinoma | 4.72e-09 | 25 |
squamous cell carcinoma | 8.21e-07 | 14 |