FFCP PHASE1:Hg19::chr2:238510264..238510281,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16523 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENST00000487008_5end | |||
|cluster_id=chr2:238510264..238510281,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_12_at_RAB17_5end | |||
|id=chr2:238510264..238510281,- | |||
|ontology_enrichment_celltype=CL:0005020!1.43e-15!6;CL:0002138!1.43e-15!6;CL:0005022!1.43e-15!6;CL:0000181!4.86e-14!12;CL:0000417!4.86e-14!12;CL:0000668!4.86e-14!12;CL:0000414!4.86e-14!12;CL:0000412!4.86e-14!12;CL:0000182!4.86e-14!12;CL:0002139!2.75e-10!24;CL:0000115!5.23e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.59e-50;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.59e-50,12;CL:0000223,2.67e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.16e-54;11!UBERON:0009497;3.04e-46;13!UBERON:0001041;8.88e-21;30!UBERON:0003104;1.08e-19;31!CL:0000223;9.17e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;7.18e-17;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.93e-16,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!6.11e-19!19;UBERON:0006925!6.11e-19!19;UBERON:0008836!6.11e-19!19;UBERON:0008835!2.62e-16!22;UBERON:0003894!2.62e-16!22;UBERON:0009854!1.39e-15!23;UBERON:0002365!2.26e-15!31;UBERON:0002330!2.26e-15!31;UBERON:0007499!2.64e-14!25;UBERON:0009497!2.64e-14!25;UBERON:0000015!2.64e-14!25;UBERON:0002423!2.64e-14!25;UBERON:0006235!2.64e-14!25;UBERON:0004161!2.64e-14!25;UBERON:0005057!9.71e-14!26;UBERON:0009856!9.71e-14!26;UBERON:0002368!1.70e-13!35;UBERON:0001473!7.99e-12!8;UBERON:0004536!7.99e-12!8;UBERON:0006558!7.99e-12!8;UBERON:0000949!2.42e-10!45;UBERON:0002530!5.35e-10!59;UBERON:0002465!1.45e-09!10;UBERON:0003929!1.69e-08!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.52e-32;19!UBERON:0006925;4.52e-32;19!UBERON:0002423;1.10e-24;25!UBERON:0002365;1.30e-18;31!UBERON:0002330;1.30e-18;31!UBERON:0002368;1.60e-17;33!UBERON:0000949;1.28e-13;43!UBERON:0002530;5.54e-08;57!UBERON:0002417;1.64e-07;58!UBERON:0000916;1.64e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.52e-32,19;UBERON:0006925,4.52e-32,19;UBERON:0008836,4.52e-32,19;UBERON:0008835,7.08e-28,22;UBERON:0003894,7.08e-28,22;UBERON:0009854,1.01e-26,23;UBERON:0007499,1.10e-24,25;UBERON:0009497,1.10e-24,25;UBERON:0000015,1.10e-24,25;UBERON:0002423,1.10e-24,25;UBERON:0006235,1.10e-24,25;UBERON:0004161,1.10e-24,25;UBERON:0009856,8.76e-24,26;UBERON:0002365,3.79e-20,31;UBERON:0002330,3.79e-20,31;UBERON:0002368,5.55e-18,35;UBERON:0000949,3.03e-14,45;UBERON:0003929,4.68e-12,54;UBERON:0005172,4.68e-12,54;UBERON:0005173,4.68e-12,54;UBERON:0002530,3.99e-11,59;UBERON:0002417,5.86e-11,60;UBERON:0000916,5.86e-11,60;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87;UBERON:0005177,6.45e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,2.44227865152393,1.64831716762333,2.6961417541674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@RAB17 | |||
}} |
Latest revision as of 04:14, 16 September 2015
Short description: | p12@RAB17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RAB17_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -7bp_to_ENST00000487008_5end |
EntrezGene: | RAB17 |
HGNC: | 16523 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.59e-50 | 12 |
endodermal cell | 2.67e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 4.52e-32 | 19 |
digestive gland | 4.52e-32 | 19 |
liver bud | 4.52e-32 | 19 |
hepatic diverticulum | 7.08e-28 | 22 |
liver primordium | 7.08e-28 | 22 |
digestive tract diverticulum | 1.01e-26 | 23 |
epithelial sac | 1.10e-24 | 25 |
epithelium of foregut-midgut junction | 1.10e-24 | 25 |
anatomical boundary | 1.10e-24 | 25 |
hepatobiliary system | 1.10e-24 | 25 |
foregut-midgut junction | 1.10e-24 | 25 |
septum transversum | 1.10e-24 | 25 |
sac | 8.76e-24 | 26 |
exocrine gland | 3.79e-20 | 31 |
exocrine system | 3.79e-20 | 31 |
endocrine gland | 5.55e-18 | 35 |
endocrine system | 3.03e-14 | 45 |
gut epithelium | 4.68e-12 | 54 |
abdomen element | 4.68e-12 | 54 |
abdominal segment element | 4.68e-12 | 54 |
gland | 3.99e-11 | 59 |
abdominal segment of trunk | 5.86e-11 | 60 |
abdomen | 5.86e-11 | 60 |
endo-epithelium | 2.70e-08 | 82 |
foregut | 7.10e-08 | 87 |
trunk region element | 6.45e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.93e-16 | 39 |