FFCP PHASE1:Hg19::chr9:135285558..135285565,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389799 | |EntrezGene=389799 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33776 | |HGNC=33776 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZQR2 | |UniProt=Q6ZQR2 | ||
|association_with_transcript=-45bp_to_ENST00000343036,NM_207417,uc004cbn.2,uc004cbo.2_5end | |association_with_transcript=-45bp_to_ENST00000343036,NM_207417,uc004cbn.2,uc004cbo.2_5end | ||
|cluster_id=chr9:135285558..135285565,+ | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_4_at_C9orf171_5end | |description=CAGE_peak_4_at_C9orf171_5end | ||
|id=chr9:135285558..135285565,+ | |id=chr9:135285558..135285565,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;8.34e-18;2!UBERON:0007297;8.34e-18;2!UBERON:0009117;3.25e-14;10!UBERON:0005564;3.25e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.97e-15!57;UBERON:0005068!2.97e-15!57;UBERON:0006241!2.97e-15!57;UBERON:0007135!2.97e-15!57;UBERON:0007023!1.83e-13!115;UBERON:0002616!1.06e-12!59;UBERON:0001017!6.14e-12!82;UBERON:0000955!1.37e-11!69;UBERON:0006238!1.37e-11!69;UBERON:0005743!3.41e-11!86;UBERON:0003075!4.04e-10!86;UBERON:0007284!4.04e-10!86;UBERON:0000073!9.49e-10!94;UBERON:0001016!9.49e-10!94;UBERON:0000369!1.35e-09!4;UBERON:0002435!1.35e-09!4;UBERON:0000204!1.35e-09!4;UBERON:0010082!1.35e-09!4;UBERON:0002346!1.70e-09!90;UBERON:0001873!2.03e-09!2;UBERON:0010122!2.03e-09!2;UBERON:0003127!3.57e-09!2;UBERON:0002780!5.81e-09!41;UBERON:0001890!5.81e-09!41;UBERON:0006240!5.81e-09!41;UBERON:0000025!7.52e-09!194;UBERON:0003076!8.90e-09!15;UBERON:0003057!8.90e-09!15;UBERON:0003080!1.06e-08!42;UBERON:0004733!8.75e-08!12;UBERON:0002028!8.75e-08!12;UBERON:0007277!8.75e-08!12;UBERON:0002298!9.66e-08!8;UBERON:0002791!1.12e-07!33;UBERON:0001893!2.06e-07!34;UBERON:0002020!2.71e-07!34;UBERON:0003528!2.71e-07!34;UBERON:0004732!3.68e-07!13;UBERON:0002308!4.29e-07!9;UBERON:0000125!4.29e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;4.27e-34;1!UBERON:0003135;1.22e-27;11!UBERON:0001873;8.34e-18;2!UBERON:0000473;1.70e-17;8!UBERON:0003101;2.92e-14;22!UBERON:0000079;2.92e-14;22!UBERON:0001896;2.45e-12;3!UBERON:0006947;2.45e-12;3!UBERON:0005383;2.45e-12;3!UBERON:0005290;2.45e-12;3!UBERON:0004054;2.45e-12;3!UBERON:0005382;2.45e-12;3!UBERON:0000369;1.38e-09;4!UBERON:0002435;1.38e-09;4!UBERON:0005904;1.38e-09;4!UBERON:0000204;1.38e-09;4!UBERON:0000991;2.77e-07;21!UBERON:0002298;8.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,7.06e-34,1;UBERON:0003135,1.40e-27,11;UBERON:0001873,6.48e-18,2;UBERON:0010122,6.48e-18,2;UBERON:0000473,1.71e-17,8;UBERON:0003101,3.13e-14,22;UBERON:0000079,3.13e-14,22;UBERON:0005383,2.07e-12,3;UBERON:0005382,2.07e-12,3;UBERON:0001896,2.59e-12,3;UBERON:0005290,2.59e-12,3;UBERON:0010096,2.59e-12,3;UBERON:0006947,2.89e-12,3;UBERON:0004054,2.89e-12,3;UBERON:0000369,1.22e-09,4;UBERON:0002435,1.22e-09,4;UBERON:0000204,1.22e-09,4;UBERON:0010082,1.22e-09,4;UBERON:0005904,1.57e-09,4;UBERON:0007023,1.12e-07,114;UBERON:0000991,2.77e-07,21;UBERON:0009196,2.77e-07,21;UBERON:0009117,2.77e-07,21;UBERON:0005564,2.77e-07,21;UBERON:0004176,5.40e-07,22;UBERON:0003133,6.51e-07,48;UBERON:0002298,8.48e-07,6 | |||
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| ||
|short_description=p4@C9orf171 | |short_description=p4@C9orf171 | ||
}} | }} |
Latest revision as of 04:10, 16 September 2015
Short description: | p4@C9orf171 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C9orf171_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | -45bp_to_ENST00000343036, NM_207417, uc004cbn.2, uc004cbo.2_5end |
EntrezGene: | C9orf171 |
HGNC: | 33776 |
UniProt: | Q6ZQR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 7.06e-34 | 1 |
male reproductive organ | 1.40e-27 | 11 |
caudate nucleus | 6.48e-18 | 2 |
future caudate nucleus | 6.48e-18 | 2 |
testis | 1.71e-17 | 8 |
male organism | 3.13e-14 | 22 |
male reproductive system | 3.13e-14 | 22 |
caudate-putamen | 2.07e-12 | 3 |
dorsal striatum | 2.07e-12 | 3 |
medulla oblongata | 2.59e-12 | 3 |
myelencephalon | 2.59e-12 | 3 |
future myelencephalon | 2.59e-12 | 3 |
male genital duct | 2.89e-12 | 3 |
internal male genitalia | 2.89e-12 | 3 |
corpus striatum | 1.22e-09 | 4 |
striatum | 1.22e-09 | 4 |
ventral part of telencephalon | 1.22e-09 | 4 |
future corpus striatum | 1.22e-09 | 4 |
duct of male reproductive system | 1.57e-09 | 4 |
adult organism | 1.12e-07 | 114 |
gonad | 2.77e-07 | 21 |
indifferent external genitalia | 2.77e-07 | 21 |
indifferent gonad | 2.77e-07 | 21 |
gonad primordium | 2.77e-07 | 21 |
external genitalia | 5.40e-07 | 22 |
reproductive organ | 6.51e-07 | 48 |
brainstem | 8.48e-07 | 6 |