FFCP PHASE1:Hg19::chr2:238499280..238499287,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64284 | |EntrezGene=64284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16523 | |HGNC=16523 | ||
|TSSclassifier=strong | |||
|UniProt=B8ZZM5 | |UniProt=B8ZZM5 | ||
|association_with_transcript=15bp_to_ENST00000409576_5end | |association_with_transcript=15bp_to_ENST00000409576_5end | ||
|cluster_id=chr2:238499280..238499287,- | |||
|coexpression_cluster_id=C211 | |coexpression_cluster_id=C211 | ||
|description=CAGE_peak_7_at_RAB17_5end | |description=CAGE_peak_7_at_RAB17_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!7.36e-16!12;CL:0000417!7.36e-16!12;CL:0000668!7.36e-16!12;CL:0000414!7.36e-16!12;CL:0000412!7.36e-16!12;CL:0000182!7.36e-16!12 | |ontology_enrichment_celltype=CL:0000181!7.36e-16!12;CL:0000417!7.36e-16!12;CL:0000668!7.36e-16!12;CL:0000414!7.36e-16!12;CL:0000412!7.36e-16!12;CL:0000182!7.36e-16!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.91e-21;12 | |ontology_enrichment_celltype_v019=CL:0000182;7.91e-21;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.33e-21,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.11e-13;11!UBERON:0009497;3.44e-11;13!UBERON:0003104;2.03e-08;31 | |ontology_enrichment_development_v019=UBERON:0004161;4.11e-13;11!UBERON:0009497;3.44e-11;13!UBERON:0003104;2.03e-08;31 | ||
|ontology_enrichment_disease=DOID:1909!2.81e-11!2 | |ontology_enrichment_disease=DOID:1909!2.81e-11!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;7.96e-29;19!UBERON:0006925;7.96e-29;19!UBERON:0002423;6.91e-22;25!UBERON:0002365;1.12e-17;31!UBERON:0002330;1.12e-17;31!UBERON:0002368;1.09e-14;33!UBERON:0000160;6.18e-14;17!UBERON:0002108;2.03e-13;4!UBERON:0000949;3.48e-11;43!UBERON:0005409;5.66e-11;22!UBERON:0005172;7.39e-10;52!UBERON:0005173;7.39e-10;52!UBERON:0001007;1.53e-09;81!UBERON:0001155;1.16e-07;9!UBERON:0004921;1.78e-07;33!UBERON:0002417;2.31e-07;58!UBERON:0000916;2.31e-07;58 | |ontology_enrichment_uberon_v019=UBERON:0002107;7.96e-29;19!UBERON:0006925;7.96e-29;19!UBERON:0002423;6.91e-22;25!UBERON:0002365;1.12e-17;31!UBERON:0002330;1.12e-17;31!UBERON:0002368;1.09e-14;33!UBERON:0000160;6.18e-14;17!UBERON:0002108;2.03e-13;4!UBERON:0000949;3.48e-11;43!UBERON:0005409;5.66e-11;22!UBERON:0005172;7.39e-10;52!UBERON:0005173;7.39e-10;52!UBERON:0001007;1.53e-09;81!UBERON:0001155;1.16e-07;9!UBERON:0004921;1.78e-07;33!UBERON:0002417;2.31e-07;58!UBERON:0000916;2.31e-07;58 | ||
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|short_description=p7@RAB17 | |short_description=p7@RAB17 | ||
}} | }} |
Latest revision as of 04:09, 16 September 2015
Short description: | p7@RAB17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RAB17_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 15bp_to_ENST00000409576_5end |
EntrezGene: | RAB17 |
HGNC: | 16523 |
UniProt: | B8ZZM5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.33e-21 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 8.16e-29 | 19 |
digestive gland | 8.16e-29 | 19 |
liver bud | 8.16e-29 | 19 |
hepatic diverticulum | 7.09e-25 | 22 |
liver primordium | 7.09e-25 | 22 |
digestive tract diverticulum | 8.63e-24 | 23 |
epithelial sac | 7.04e-22 | 25 |
epithelium of foregut-midgut junction | 7.04e-22 | 25 |
anatomical boundary | 7.04e-22 | 25 |
hepatobiliary system | 7.04e-22 | 25 |
foregut-midgut junction | 7.04e-22 | 25 |
septum transversum | 7.04e-22 | 25 |
sac | 4.94e-21 | 26 |
exocrine gland | 1.28e-17 | 31 |
exocrine system | 1.28e-17 | 31 |
endocrine gland | 1.38e-15 | 35 |
intestine | 6.95e-14 | 17 |
abdomen element | 1.70e-13 | 54 |
abdominal segment element | 1.70e-13 | 54 |
small intestine | 1.97e-13 | 4 |
abdominal segment of trunk | 4.21e-12 | 60 |
abdomen | 4.21e-12 | 60 |
endocrine system | 4.46e-12 | 45 |
subdivision of digestive tract | 5.93e-12 | 118 |
gut epithelium | 5.04e-10 | 54 |
gastrointestinal system | 1.05e-09 | 25 |
digestive system | 1.46e-09 | 145 |
digestive tract | 1.46e-09 | 145 |
primitive gut | 1.46e-09 | 145 |
gland | 3.75e-09 | 59 |
endoderm-derived structure | 1.42e-08 | 160 |
endoderm | 1.42e-08 | 160 |
presumptive endoderm | 1.42e-08 | 160 |
colon | 1.33e-07 | 9 |
trunk region element | 5.50e-07 | 101 |