FFCP PHASE1:Hg19::chr2:105470562..105470582,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:105470562..105470582,+ to FFCP PHASE1:Hg19::chr2:105470562..105470582,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
| | |EntrezGene=5455 | ||
| | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:105470562..105470582,+ | |||
|coexpression_cluster_id=C919 | |||
|description=CAGE_peak_5_at_POU3F3_5end | |||
|id=chr2:105470562..105470582,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000507;7.02e-10;10!CL:1000494;7.02e-10;10!CL:0000128;4.04e-08;7!CL:0000126;4.04e-08;7!CL:0000127;4.04e-08;7!CL:1000497;9.22e-08;17!CL:0002518;9.22e-08;17!CL:0002319;1.99e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,6.86e-10,10;CL:1000494,6.86e-10,10;CL:0000128,4.04e-08,7;CL:0000126,4.04e-08,7;CL:0000127,4.04e-08,7;CL:0002453,4.04e-08,7;CL:1000497,9.08e-08,17;CL:0002518,9.08e-08,17;CL:0002319,2.01e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.65e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.91e-46!57;UBERON:0005068!2.91e-46!57;UBERON:0006241!2.91e-46!57;UBERON:0007135!2.91e-46!57;UBERON:0001017!3.08e-46!82;UBERON:0005743!4.14e-44!86;UBERON:0000073!9.83e-43!94;UBERON:0001016!9.83e-43!94;UBERON:0002616!1.46e-42!59;UBERON:0000955!1.02e-37!69;UBERON:0006238!1.02e-37!69;UBERON:0002780!1.06e-33!41;UBERON:0001890!1.06e-33!41;UBERON:0006240!1.06e-33!41;UBERON:0003075!2.77e-33!86;UBERON:0007284!2.77e-33!86;UBERON:0002346!5.30e-33!90;UBERON:0003080!1.61e-32!42;UBERON:0001893!8.06e-32!34;UBERON:0002020!8.93e-32!34;UBERON:0003528!8.93e-32!34;UBERON:0002791!6.65e-31!33;UBERON:0001869!1.02e-29!32;UBERON:0007023!1.99e-29!115;UBERON:0000924!1.46e-27!173;UBERON:0006601!1.46e-27!173;UBERON:0000153!2.30e-27!129;UBERON:0007811!2.30e-27!129;UBERON:0004121!2.40e-27!169;UBERON:0000033!3.17e-26!123;UBERON:0003056!5.67e-24!61;UBERON:0000956!1.73e-23!25;UBERON:0000203!1.73e-23!25;UBERON:0002619!2.39e-20!22;UBERON:0001950!1.50e-18!20;UBERON:0003076!1.43e-14!15;UBERON:0003057!1.43e-14!15;UBERON:0004732!1.03e-12!13;UBERON:0004733!1.10e-11!12;UBERON:0002028!1.10e-11!12;UBERON:0007277!1.10e-11!12;UBERON:0000489!1.55e-10!32;UBERON:0000064!1.66e-10!219;UBERON:0002308!1.13e-09!9;UBERON:0000125!1.13e-09!9;UBERON:0002420!1.88e-09!9;UBERON:0007245!1.88e-09!9;UBERON:0010009!1.88e-09!9;UBERON:0010011!1.88e-09!9;UBERON:0000454!1.88e-09!9;UBERON:0002680!4.32e-09!9;UBERON:0001895!4.32e-09!9;UBERON:0010092!4.32e-09!9;UBERON:0000025!1.23e-08!194;UBERON:0000475!1.30e-08!365;UBERON:0002113!2.80e-08!27;UBERON:0003918!2.80e-08!27;UBERON:0005095!2.80e-08!27;UBERON:0007687!2.80e-08!27;UBERON:0009663!8.26e-08!7;UBERON:0000477!3.80e-07!286;UBERON:0000200!6.69e-07!6;UBERON:0001871!9.55e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.01e-38;34!UBERON:0003528;4.75e-38;34!UBERON:0002020;4.75e-38;34!UBERON:0002791;9.62e-38;32!UBERON:0001869;1.28e-37;32!UBERON:0000073;4.23e-35;53!UBERON:0002616;4.23e-35;53!UBERON:0002780;5.91e-34;41!UBERON:0001890;5.91e-34;41!UBERON:0000956;8.47e-33;25!UBERON:0000203;8.47e-33;25!UBERON:0002619;2.39e-28;22!UBERON:0001950;8.47e-26;20!UBERON:0001017;3.95e-25;75!UBERON:0000955;5.74e-25;68!UBERON:0001016;1.65e-21;83!UBERON:0004732;2.71e-17;13!UBERON:0004733;7.71e-16;12!UBERON:0002028;7.71e-16;12!UBERON:0000125;5.21e-13;9!UBERON:0002308;5.21e-13;9!UBERON:0000489;6.02e-13;29!UBERON:0002420;1.10e-12;9!UBERON:0007245;1.10e-12;9!UBERON:0010009;1.10e-12;9!UBERON:0010011;1.10e-12;9!UBERON:0000454;1.10e-12;9!UBERON:0002680;3.53e-12;9!UBERON:0001895;3.53e-12;9!UBERON:0009663;2.24e-10;7!UBERON:0007023;2.77e-10;114!UBERON:0004211;7.02e-10;10!UBERON:0009773;7.02e-10;10!UBERON:0001231;7.02e-10;10!UBERON:0004810;7.02e-10;10!UBERON:0002113;1.22e-09;24!UBERON:0011143;1.22e-09;24!UBERON:0000200;4.20e-09;6!UBERON:0002298;4.58e-09;6!UBERON:0011216;5.70e-09;132!UBERON:0002037;2.00e-08;6!UBERON:0001872;2.45e-08;5!UBERON:0002021;2.89e-08;5!UBERON:0006554;6.11e-08;30!UBERON:0001008;6.11e-08;30!UBERON:0001871;8.48e-08;6!UBERON:0000349;1.20e-07;5!UBERON:0010314;5.98e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.52e-67,56;UBERON:0005068,2.52e-67,56;UBERON:0006241,2.52e-67,56;UBERON:0007135,2.52e-67,56;UBERON:0001017,5.88e-66,81;UBERON:0000073,6.05e-63,53;UBERON:0002616,6.05e-63,53;UBERON:0001016,1.52e-59,89;UBERON:0000955,4.28e-55,68;UBERON:0006238,4.28e-55,68;UBERON:0003075,6.06e-50,82;UBERON:0007284,6.06e-50,82;UBERON:0002346,1.69e-48,86;UBERON:0002780,9.38e-48,41;UBERON:0001890,9.38e-48,41;UBERON:0003080,9.38e-48,41;UBERON:0006240,9.38e-48,41;UBERON:0001893,1.38e-44,34;UBERON:0003528,1.59e-44,34;UBERON:0002020,1.59e-44,34;UBERON:0002791,8.56e-42,32;UBERON:0001869,1.31e-41,32;UBERON:0010371,1.09e-39,104;UBERON:0003056,3.21e-37,61;UBERON:0004121,1.31e-36,171;UBERON:0000924,1.31e-36,171;UBERON:0006601,1.31e-36,171;UBERON:0000956,8.68e-33,25;UBERON:0000203,8.68e-33,25;UBERON:0007023,1.22e-32,114;UBERON:0010314,2.25e-32,132;UBERON:0002619,2.45e-28,22;UBERON:0001950,8.55e-26,20;UBERON:0011216,1.68e-22,223;UBERON:0003076,6.57e-20,15;UBERON:0003057,6.57e-20,15;UBERON:0004732,2.74e-17,13;UBERON:0004733,7.78e-16,12;UBERON:0002028,7.78e-16,12;UBERON:0007277,7.78e-16,12;UBERON:0000025,2.27e-15,192;UBERON:0000489,3.04e-15,31;UBERON:0004111,2.71e-13,240;UBERON:0000125,5.33e-13,9;UBERON:0002308,5.33e-13,9;UBERON:0002420,1.09e-12,9;UBERON:0007245,1.09e-12,9;UBERON:0010009,1.09e-12,9;UBERON:0010011,1.09e-12,9;UBERON:0000454,1.09e-12,9;UBERON:0002680,3.53e-12,9;UBERON:0001895,3.53e-12,9;UBERON:0010092,3.53e-12,9;UBERON:0002113,7.77e-12,26;UBERON:0003918,7.77e-12,26;UBERON:0011143,7.77e-12,26;UBERON:0005095,7.77e-12,26;UBERON:0007687,7.77e-12,26;UBERON:0009663,2.24e-10,7;UBERON:0004810,6.86e-10,10;UBERON:0000483,1.91e-09,306;UBERON:0000119,3.65e-09,309;UBERON:0000200,4.23e-09,6;UBERON:0002298,4.68e-09,6;UBERON:0000922,1.52e-08,592;UBERON:0002037,1.97e-08,6;UBERON:0006215,1.97e-08,6;UBERON:0001872,2.43e-08,5;UBERON:0002021,2.96e-08,5;UBERON:0001871,8.38e-08,6;UBERON:0005423,1.19e-07,581;UBERON:0000349,1.22e-07,5;UBERON:0006555,5.79e-07,16;UBERON:0004819,5.79e-07,16 | |||
|phase1_expression=0.181678379270557,0,0,0,0,1.74467704820074,0,0,0.783556884599516,0,0,0,0,0.990130823680373,0.662794751455832,0,0,0,0,41.2455544557239,24.6840836405546,46.391298778757,100.468831483001,81.9877806186576,97.6721736047566,0,0,0,0,0,1.08371286321253,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,23.9691708160814,0,0,0.324547393654683,0.174129737299267,0.132957960518865,1.43094374583205,1.14398982156026,1.11437250398869,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48122083583342,1.72852777344,0,2.49728061464256,1.1409436430889,3.28787097213962,0,0.161872944368132,0,6.53293348015658,10.072414019565,19.2185952986924,0,0,0,0,3.70339450698946,4.62938523526267,2.21651292387346,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,2.5562667431294,3.21349270547648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95394953340702,57.8316660233192,0,0,0,0,0,0,10.4258657699304,28.0782392025486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871901815541886,2.30029607499127,0.985326475791887,0,0,0.144119953416961,0,0,0,0,3.4214489204541,0,0,0,0.336393253036082,0.87192013766656,0.22001485746285,0,7.15312891703765,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,1.73737568001095,0,0,0,0,0,0.128343036279748,135.940623959018,232.950338405143,257.505174654973,275.731772740338,203.502461777359,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,6.2083842775503,0,0,0,0.195801157462741,1.37257369524342,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,15.340786838852,19.2538342761037,25.0991926136594,37.9961984098478,26.5990104810047,0,0,0.431831832204279,0,0,4.51520796469368,19.880349297513,27.4255082946479,22.3874754722178,0,0,0,0,0,3.09123034943167,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.8399612061943,63.3381843643419,0,0,0,2.7301702225266,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0,1.00988449083511,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0.879049075631364,0,0,0,0,0.296964680832639,0,25.8478388419237,40.6534613426382,0,0,0,0.796991953004279,1.10513566212459,11.0850409055881,0,0,0,0,0,0,2.36744173528641,0,2.22273980289274,58.1599647657131,37.9421521481972,113.779864860681,0,0,0,0,0,0,9.30807107751954,0,12.6746246301303,31.0009485034844,34.7317743241175,16.7839909948792,27.9765527625998,16.8462142803522,34.8822781474816,0,0,1.15425387755696,0.683652335082007,0.23056390438806,0.718061155278177,0,0,0,0,0,0,0,0,0,0,0,0,2.53197677433632,0,0,4.11138415509973,0,0.265372693510018,2.4441205797345,0,0.123563938946503,0.313265848516366,79.7355403161409,0,52.0067069510253,0,0,0,136.920787788739,0,211.802351048299,2.14834370736859,2.40517471063188,2.17745201934219,0,0,0,0,65.1755860408225,0,0,0,0,57.834527188112,0,0,0,0,0,0,3.61569185248852,0,0,34.6310053878656,0.586654148204409,0,0,0.39961921916426,0,0,98.1523387770437,0,0.124252535565433,0,0,0,0,0,43.8306810758146,59.280029060233,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,31.0139579025628,57.0692271607502,0,0,0.415440338029185,0.2249738915515,0,36.935730448079,0,63.9902343269489,107.689269441151,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.1617870682816,47.339271423883,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0.306345576763462,0,0.942324577501406,27.4681135789766,38.6823259739223,52.7053818274364,26.3768230017433,44.1497625116672,44.8336029236789,0,0,0,0,0,28.5684292542198,37.0997833243712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,3.78554694685953,0,0.428883182749851,0,0,0,0,0,0,0.219284049578707,0,0,0,0.512483037175893,0,0,48.1139357808023,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,2.48830904013189,0,0,0.943595651135378,0,0,8.07784696386395,0.123935764259002,0.558644917973244,0.636008701306837,5.59918389508899,0,0.352675943690684,0,36.6106583049819,41.0920071344196,74.2297444615753,38.9721092057435,136.118715959728,37.6215453405345,39.4000575341717,85.6616521554926,0,0,0,0,0,0.690359926060101,0,0.0752103283492573,0,0,0,0,0,40.9953138633656,50.7700764099001,50.4315783462889,43.6934932236018,143.307399962774,0,1.48863353516788,0,0,5.35701835878287,4.03540466662589,0,0,0,0,0,28.6152575832462,40.516028514715,0,0,4.78807866388135,31.5802335731164,0,10.0447459256045,7.77339328387037,50.1639272281403,0.428859265059938,0,0,0,0,0,0,0,0,0,0,149.455628717398,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0.994753875806841,0.118920090777569,1.80713731262336,0,0,0,0,0,0,0,52.8069776539203,67.4295328742485,44.378851396257,0,0,0.128915775947154,0,0,0,0,2.92134555298607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| ||
|short_description=p5@POU3F3 | |||
}} | }} |
Latest revision as of 04:03, 16 September 2015
Short description: | p5@POU3F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_POU3F3_5end |
Coexpression cluster: | C919_Neurons_Neural_parietal_Astrocyte_duodenum_occipital_temporal |
Association with transcript: | NA |
EntrezGene: | POU3F3 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 6.86e-10 | 10 |
nephron tubule epithelial cell | 6.86e-10 | 10 |
oligodendrocyte | 4.04e-08 | 7 |
macroglial cell | 4.04e-08 | 7 |
astrocyte | 4.04e-08 | 7 |
oligodendrocyte precursor cell | 4.04e-08 | 7 |
kidney cell | 9.08e-08 | 17 |
kidney epithelial cell | 9.08e-08 | 17 |
neural cell | 2.01e-07 | 25 |