FFCP PHASE1:Hg19::chr10:105314806..105314834,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:105314806..105314834,+ to FFCP PHASE1:Hg19::chr10:105314806..105314834,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9148 | |EntrezGene=9148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7761 | |HGNC=7761 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-154bp_to_ENST00000437579_5end | |||
|cluster_id=chr10:105314806..105314834,+ | |||
|description=CAGE_peak_12_at_NEURL_5end | |||
|id=chr10:105314806..105314834,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.52e-33!42;CL:0000860!2.38e-30!45;CL:0000557!7.10e-20!71;CL:0000839!3.91e-19!70;CL:0000766!5.74e-19!76;CL:0002009!1.28e-18!65;CL:0002194!2.30e-18!63;CL:0000576!2.30e-18!63;CL:0000040!2.30e-18!63;CL:0000559!2.30e-18!63;CL:0002393!3.20e-12!9;CL:0002397!3.20e-12!9;CL:0000763!2.28e-10!112;CL:0000049!2.28e-10!112;CL:0000738!1.53e-07!140;CL:0002087!4.19e-07!119;CL:0002031!4.80e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0002393;4.81e-14;6!CL:0002397;4.81e-14;6!CL:0000875;1.43e-11;3!CL:0002396;1.43e-11;3!CL:0000576;1.88e-11;48!CL:0000860;1.79e-08;33!CL:0002057;1.79e-08;33!CL:0000766;1.91e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.24e-23,9;CL:0002397,1.24e-23,9;CL:0000860,9.62e-23,42;CL:0002057,9.62e-23,42;CL:0000473,2.71e-19,48;CL:0000234,2.71e-19,48;CL:0002194,1.75e-14,59;CL:0000576,1.75e-14,59;CL:0000040,1.75e-14,59;CL:0000559,1.75e-14,59;CL:0000766,5.73e-14,72;CL:0002009,7.26e-14,61;CL:0000839,1.74e-12,66;CL:0000557,3.10e-12,67;CL:0000875,1.32e-11,3;CL:0002396,1.32e-11,3;CL:0000763,1.01e-07,108;CL:0000049,1.01e-07,108;CL:0002087,6.36e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.40e-16;42!UBERON:0006215;1.12e-11;3!UBERON:0006601;2.03e-08;82!UBERON:0010122;2.73e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.86e-31!115;UBERON:0001049!3.25e-29!57;UBERON:0005068!3.25e-29!57;UBERON:0006241!3.25e-29!57;UBERON:0007135!3.25e-29!57;UBERON:0002780!5.56e-27!41;UBERON:0001890!5.56e-27!41;UBERON:0006240!5.56e-27!41;UBERON:0001869!9.47e-27!32;UBERON:0001893!3.85e-26!34;UBERON:0003080!4.70e-26!42;UBERON:0001017!2.48e-25!82;UBERON:0002791!4.48e-25!33;UBERON:0000955!5.43e-25!69;UBERON:0006238!5.43e-25!69;UBERON:0002616!8.87e-25!59;UBERON:0002020!1.65e-24!34;UBERON:0003528!1.65e-24!34;UBERON:0005743!1.89e-24!86;UBERON:0000073!1.78e-23!94;UBERON:0001016!1.78e-23!94;UBERON:0002619!1.60e-22!22;UBERON:0001950!3.91e-20!20;UBERON:0003075!4.67e-20!86;UBERON:0007284!4.67e-20!86;UBERON:0000956!5.51e-19!25;UBERON:0000203!5.51e-19!25;UBERON:0002390!9.40e-19!102;UBERON:0003061!9.40e-19!102;UBERON:0002346!1.86e-18!90;UBERON:0002193!2.02e-16!112;UBERON:0003056!2.09e-16!61;UBERON:0002371!4.59e-16!80;UBERON:0001474!5.28e-14!86;UBERON:0000153!5.01e-12!129;UBERON:0007811!5.01e-12!129;UBERON:0004765!1.53e-11!101;UBERON:0001434!1.53e-11!101;UBERON:0000033!6.50e-11!123;UBERON:0002405!1.31e-10!115;UBERON:0000922!9.47e-10!612;UBERON:0002420!2.12e-09!9;UBERON:0007245!2.12e-09!9;UBERON:0010009!2.12e-09!9;UBERON:0010011!2.12e-09!9;UBERON:0000454!2.12e-09!9;UBERON:0000062!2.25e-09!511;UBERON:0004121!2.80e-09!169;UBERON:0000924!1.05e-08!173;UBERON:0006601!1.05e-08!173;UBERON:0002050!6.55e-08!605;UBERON:0005423!6.55e-08!605;UBERON:0001871!7.65e-08!7;UBERON:0000200!8.94e-08!6;UBERON:0002021!1.15e-07!5;UBERON:0000349!1.33e-07!5;UBERON:0000923!1.35e-07!604;UBERON:0005291!1.35e-07!604;UBERON:0006598!1.35e-07!604;UBERON:0002532!1.35e-07!604;UBERON:0000468!2.98e-07!659;UBERON:0000467!3.94e-07!625;UBERON:0009663!4.40e-07!7;UBERON:0000480!4.66e-07!626;UBERON:0002308!5.72e-07!9;UBERON:0000125!5.72e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.65e-47;32!UBERON:0002791;9.16e-45;32!UBERON:0002619;1.79e-42;22!UBERON:0003528;2.02e-42;34!UBERON:0002020;2.02e-42;34!UBERON:0001893;2.40e-42;34!UBERON:0000956;5.15e-37;25!UBERON:0000203;5.15e-37;25!UBERON:0001950;1.44e-36;20!UBERON:0002780;2.15e-34;41!UBERON:0001890;2.15e-34;41!UBERON:0000073;1.47e-24;53!UBERON:0002616;1.47e-24;53!UBERON:0000955;3.81e-21;68!UBERON:0001017;8.99e-20;75!UBERON:0002420;3.43e-18;9!UBERON:0007245;3.43e-18;9!UBERON:0010009;3.43e-18;9!UBERON:0010011;3.43e-18;9!UBERON:0000454;3.43e-18;9!UBERON:0000349;4.44e-17;5!UBERON:0002021;5.32e-17;5!UBERON:0001016;2.12e-15;83!UBERON:0000369;1.36e-14;4!UBERON:0002435;1.36e-14;4!UBERON:0000204;1.36e-14;4!UBERON:0000125;2.64e-13;9!UBERON:0002308;2.64e-13;9!UBERON:0009663;1.75e-12;7!UBERON:0001871;9.00e-12;6!UBERON:0005383;1.50e-11;3!UBERON:0005382;1.50e-11;3!UBERON:0001872;7.25e-11;5!UBERON:0007023;1.05e-09;114!UBERON:0001873;2.73e-08;2!UBERON:0001954;6.32e-08;2!UBERON:0003022;6.32e-08;2!UBERON:0002421;6.32e-08;2!UBERON:0002600;6.32e-08;2!UBERON:0001876;8.55e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.48e-53,32;UBERON:0001893,2.12e-49,34;UBERON:0003528,3.17e-49,34;UBERON:0002020,3.17e-49,34;UBERON:0002791,2.03e-48,32;UBERON:0000073,3.36e-48,53;UBERON:0002616,3.36e-48,53;UBERON:0002780,4.58e-47,41;UBERON:0001890,4.58e-47,41;UBERON:0003080,4.58e-47,41;UBERON:0006240,4.58e-47,41;UBERON:0001049,3.13e-45,56;UBERON:0005068,3.13e-45,56;UBERON:0006241,3.13e-45,56;UBERON:0007135,3.13e-45,56;UBERON:0000955,1.23e-43,68;UBERON:0006238,1.23e-43,68;UBERON:0002619,8.72e-43,22;UBERON:0001017,5.79e-38,81;UBERON:0000956,2.74e-37,25;UBERON:0000203,2.74e-37,25;UBERON:0001950,6.64e-37,20;UBERON:0001016,2.30e-33,89;UBERON:0003056,1.37e-29,61;UBERON:0003075,1.61e-28,82;UBERON:0007284,1.61e-28,82;UBERON:0002346,7.70e-27,86;UBERON:0007023,2.81e-23,114;UBERON:0010371,7.04e-21,104;UBERON:0002420,3.56e-18,9;UBERON:0007245,3.56e-18,9;UBERON:0010009,3.56e-18,9;UBERON:0010011,3.56e-18,9;UBERON:0000454,3.56e-18,9;UBERON:0002021,3.33e-17,5;UBERON:0000349,4.79e-17,5;UBERON:0010314,4.21e-16,132;UBERON:0000369,1.42e-14,4;UBERON:0002435,1.42e-14,4;UBERON:0000204,1.42e-14,4;UBERON:0010082,1.42e-14,4;UBERON:0004121,1.61e-13,171;UBERON:0000924,1.61e-13,171;UBERON:0006601,1.61e-13,171;UBERON:0000125,3.71e-13,9;UBERON:0002308,3.71e-13,9;UBERON:0009663,1.81e-12,7;UBERON:0001871,8.96e-12,6;UBERON:0005383,1.62e-11,3;UBERON:0005382,1.62e-11,3;UBERON:0001872,6.67e-11,5;UBERON:0002371,2.82e-10,76;UBERON:0011216,5.47e-10,223;UBERON:0002390,5.47e-10,98;UBERON:0003061,5.47e-10,98;UBERON:0001474,3.25e-09,82;UBERON:0000025,1.01e-08,192;UBERON:0002193,1.32e-08,108;UBERON:0000923,2.78e-08,560;UBERON:0010316,2.78e-08,560;UBERON:0005291,2.78e-08,560;UBERON:0006598,2.78e-08,560;UBERON:0010317,2.78e-08,560;UBERON:0002532,2.78e-08,560;UBERON:0001873,2.79e-08,2;UBERON:0010122,2.79e-08,2;UBERON:0002050,3.94e-08,564;UBERON:0004765,5.02e-08,90;UBERON:0001954,7.02e-08,2;UBERON:0003022,7.02e-08,2;UBERON:0002421,7.02e-08,2;UBERON:0002600,7.02e-08,2;UBERON:0001876,8.59e-08,2;UBERON:0001434,9.97e-08,100;UBERON:0002405,1.23e-07,93;UBERON:0005423,1.65e-07,581;UBERON:0000922,3.98e-07,592 | |||
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| ||
|short_description=p12@NEURL | |||
}} | }} |
Latest revision as of 03:51, 16 September 2015
Short description: | p12@NEURL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NEURL_5end |
Coexpression cluster: | NA |
Association with transcript: | -154bp_to_ENST00000437579_5end |
EntrezGene: | NEURL |
HGNC: | 7761 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.24e-23 | 9 |
CD14-positive, CD16-positive monocyte | 1.24e-23 | 9 |
classical monocyte | 9.62e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.62e-23 | 42 |
defensive cell | 2.71e-19 | 48 |
phagocyte | 2.71e-19 | 48 |
monopoietic cell | 1.75e-14 | 59 |
monocyte | 1.75e-14 | 59 |
monoblast | 1.75e-14 | 59 |
promonocyte | 1.75e-14 | 59 |
myeloid leukocyte | 5.73e-14 | 72 |
macrophage dendritic cell progenitor | 7.26e-14 | 61 |
myeloid lineage restricted progenitor cell | 1.74e-12 | 66 |
granulocyte monocyte progenitor cell | 3.10e-12 | 67 |
non-classical monocyte | 1.32e-11 | 3 |
CD14-low, CD16-positive monocyte | 1.32e-11 | 3 |
myeloid cell | 1.01e-07 | 108 |
common myeloid progenitor | 1.01e-07 | 108 |
nongranular leukocyte | 6.36e-07 | 115 |