FFCP PHASE1:Hg19::chrX:63005250..63005279,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:63005250..63005279,-
|short_description=p6@ARHGEF9
|description=CAGE_peak_6_at_ARHGEF9_5end
|association_with_transcript=133bp_to_ENST00000374878_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23229 | |EntrezGene=23229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14561 | |HGNC=14561 | ||
|TSSclassifier=strong | |||
|UniProt=B1AMR4 | |UniProt=B1AMR4 | ||
|association_with_transcript=133bp_to_ENST00000374878_5end | |||
|cluster_id=chrX:63005250..63005279,- | |||
|description=CAGE_peak_6_at_ARHGEF9_5end | |||
|id=chrX:63005250..63005279,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.58e-13;5!CL:0002322;8.30e-09;5!CL:0000163;3.23e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.15e-13,5;CL:0002028,2.15e-13,5;CL:0002322,1.11e-08,5;CL:0000163,2.94e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.79e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!9.25e-47!86;UBERON:0000073!2.15e-45!94;UBERON:0001016!2.15e-45!94;UBERON:0001017!2.45e-45!82;UBERON:0007023!5.27e-42!115;UBERON:0001049!8.90e-42!57;UBERON:0005068!8.90e-42!57;UBERON:0006241!8.90e-42!57;UBERON:0007135!8.90e-42!57;UBERON:0000955!3.62e-38!69;UBERON:0006238!3.62e-38!69;UBERON:0002616!1.01e-37!59;UBERON:0002780!8.56e-37!41;UBERON:0001890!8.56e-37!41;UBERON:0006240!8.56e-37!41;UBERON:0003075!6.74e-36!86;UBERON:0007284!6.74e-36!86;UBERON:0003080!1.53e-35!42;UBERON:0002346!3.06e-33!90;UBERON:0003056!3.14e-30!61;UBERON:0001893!3.84e-30!34;UBERON:0002020!5.80e-30!34;UBERON:0003528!5.80e-30!34;UBERON:0002791!4.78e-29!33;UBERON:0001869!1.62e-28!32;UBERON:0004121!3.89e-28!169;UBERON:0000924!8.77e-27!173;UBERON:0006601!8.77e-27!173;UBERON:0000153!9.72e-26!129;UBERON:0007811!9.72e-26!129;UBERON:0000033!6.21e-25!123;UBERON:0002619!3.07e-24!22;UBERON:0001950!2.84e-22!20;UBERON:0000956!8.12e-22!25;UBERON:0000203!8.12e-22!25;UBERON:0002420!7.14e-10!9;UBERON:0007245!7.14e-10!9;UBERON:0010009!7.14e-10!9;UBERON:0010011!7.14e-10!9;UBERON:0000454!7.14e-10!9;UBERON:0002308!1.45e-09!9;UBERON:0000125!1.45e-09!9;UBERON:0001871!1.45e-09!7;UBERON:0000062!1.39e-08!511;UBERON:0000064!2.10e-08!219;UBERON:0000922!2.66e-08!612;UBERON:0001894!5.28e-08!7;UBERON:0006222!5.28e-08!7;UBERON:0009663!6.33e-08!7;UBERON:0000200!7.16e-08!6;UBERON:0003076!8.42e-08!15;UBERON:0003057!8.42e-08!15;UBERON:0000475!9.67e-08!365;UBERON:0000025!2.24e-07!194;UBERON:0000119!2.62e-07!312;UBERON:0000483!2.92e-07!309;UBERON:0000481!3.66e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.26e-46;22!UBERON:0001869;1.08e-43;32!UBERON:0002791;1.75e-43;32!UBERON:0001893;2.17e-42;34!UBERON:0003528;1.30e-41;34!UBERON:0002020;1.30e-41;34!UBERON:0001950;2.23e-41;20!UBERON:0002780;5.05e-40;41!UBERON:0001890;5.05e-40;41!UBERON:0000956;5.46e-40;25!UBERON:0000203;5.46e-40;25!UBERON:0000073;1.06e-28;53!UBERON:0002616;1.06e-28;53!UBERON:0001017;5.76e-21;75!UBERON:0000955;2.55e-20;68!UBERON:0001871;1.12e-17;6!UBERON:0000200;5.02e-16;6!UBERON:0001016;6.65e-16;83!UBERON:0002420;2.28e-13;9!UBERON:0007245;2.28e-13;9!UBERON:0010009;2.28e-13;9!UBERON:0010011;2.28e-13;9!UBERON:0000454;2.28e-13;9!UBERON:0000349;6.13e-13;5!UBERON:0000369;3.20e-11;4!UBERON:0002435;3.20e-11;4!UBERON:0000204;3.20e-11;4!UBERON:0002784;3.42e-11;4!UBERON:0000125;5.07e-10;9!UBERON:0002308;5.07e-10;9!UBERON:0001894;1.21e-09;7!UBERON:0001872;2.04e-09;5!UBERON:0009663;2.14e-09;7!UBERON:0007023;4.89e-09;114!UBERON:0005383;9.73e-09;3!UBERON:0005382;9.73e-09;3!UBERON:0001870;1.35e-08;3!UBERON:0011216;2.07e-08;132!UBERON:0002021;2.24e-08;5!UBERON:0001905;5.29e-07;2!UBERON:0002757;5.29e-07;2!UBERON:0010134;5.29e-07;2!UBERON:0005408;5.29e-07;2!UBERON:0001899;5.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,8.93e-58,41;UBERON:0001890,8.93e-58,41;UBERON:0003080,8.93e-58,41;UBERON:0006240,8.93e-58,41;UBERON:0000073,2.79e-55,53;UBERON:0002616,2.79e-55,53;UBERON:0001049,8.13e-52,56;UBERON:0005068,8.13e-52,56;UBERON:0006241,8.13e-52,56;UBERON:0007135,8.13e-52,56;UBERON:0001893,3.10e-49,34;UBERON:0001017,4.86e-49,81;UBERON:0001869,5.36e-49,32;UBERON:0003528,6.38e-49,34;UBERON:0002020,6.38e-49,34;UBERON:0000955,1.10e-48,68;UBERON:0006238,1.10e-48,68;UBERON:0002791,1.80e-48,32;UBERON:0002619,1.39e-46,22;UBERON:0001016,2.79e-45,89;UBERON:0001950,5.45e-42,20;UBERON:0003056,4.99e-41,61;UBERON:0000956,1.69e-40,25;UBERON:0000203,1.69e-40,25;UBERON:0003075,1.69e-38,82;UBERON:0007284,1.69e-38,82;UBERON:0002346,3.20e-36,86;UBERON:0010371,7.67e-32,104;UBERON:0007023,3.37e-30,114;UBERON:0004121,1.85e-25,171;UBERON:0000924,1.85e-25,171;UBERON:0006601,1.85e-25,171;UBERON:0010314,6.77e-24,132;UBERON:0001871,4.63e-18,6;UBERON:0011216,1.86e-16,223;UBERON:0000200,2.71e-16,6;UBERON:0002420,1.09e-13,9;UBERON:0007245,1.09e-13,9;UBERON:0010009,1.09e-13,9;UBERON:0010011,1.09e-13,9;UBERON:0000454,1.09e-13,9;UBERON:0000349,2.59e-13,5;UBERON:0000369,1.56e-11,4;UBERON:0002435,1.56e-11,4;UBERON:0000204,1.56e-11,4;UBERON:0010082,1.56e-11,4;UBERON:0000025,1.72e-11,192;UBERON:0002784,3.11e-11,4;UBERON:0000125,4.45e-10,9;UBERON:0002308,4.45e-10,9;UBERON:0001894,9.58e-10,7;UBERON:0006222,9.58e-10,7;UBERON:0009663,1.92e-09,7;UBERON:0001872,2.12e-09,5;UBERON:0005383,5.47e-09,3;UBERON:0005382,5.47e-09,3;UBERON:0001870,7.34e-09,3;UBERON:0002021,2.03e-08,5;UBERON:0004111,7.22e-08,240;UBERON:0001905,5.64e-07,2;UBERON:0002757,5.64e-07,2;UBERON:0010134,5.64e-07,2;UBERON:0005408,5.64e-07,2;UBERON:0001899,5.64e-07,2;UBERON:0000922,9.27e-07,592 | |||
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| ||
|short_description=p6@ARHGEF9 | |||
}} | }} |
Latest revision as of 03:44, 16 September 2015
Short description: | p6@ARHGEF9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARHGEF9_5end |
Coexpression cluster: | NA |
Association with transcript: | 133bp_to_ENST00000374878_5end |
EntrezGene: | ARHGEF9 |
HGNC: | 14561 |
UniProt: | B1AMR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.15e-13 | 5 |
basophil mast progenitor cell | 2.15e-13 | 5 |
embryonic stem cell | 1.11e-08 | 5 |
endocrine cell | 2.94e-07 | 9 |