FFCP PHASE1:Hg19::chr1:111965660..111965680,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:111965660..111965680,-
|short_description=p1@OVGP1
|description=CAGE_peak_1_at_OVGP1_5end
|association_with_transcript=0bp_to_ENST00000481495_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5016 | |EntrezGene=5016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8524 | |HGNC=8524 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000481495_5end | |||
|cluster_id=chr1:111965660..111965680,- | |||
|description=CAGE_peak_1_at_OVGP1_5end | |||
|id=chr1:111965660..111965680,- | |||
|ontology_enrichment_celltype=CL:0000066!1.16e-14!254;CL:0000181!1.98e-10!12;CL:0000417!1.98e-10!12;CL:0000668!1.98e-10!12;CL:0000414!1.98e-10!12;CL:0000412!1.98e-10!12;CL:0000182!1.98e-10!12;CL:0000223!3.50e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.83e-28;12!CL:0000039;5.62e-10;7!CL:0000586;5.62e-10;7!CL:0000167;1.53e-08;1!CL:0000164;1.53e-08;1!CL:0000502;1.53e-08;1!CL:0000172;1.53e-08;1!CL:0000173;1.53e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.56e-28,12;CL:0000039,4.90e-10,7;CL:0000586,4.90e-10,7;CL:0000167,1.59e-08,1;CL:0000164,1.59e-08,1;CL:0000502,1.59e-08,1;CL:0000172,1.59e-08,1;CL:0000173,1.59e-08,1;CL:0002351,1.59e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0009497;5.17e-34;13!UBERON:0004161;6.69e-23;11!UBERON:0001041;4.05e-22;30!UBERON:0003104;4.68e-17;31!UBERON:0003124;8.78e-09;1!CL:0002351;1.53e-08;1 | |||
|ontology_enrichment_disease=DOID:305!1.85e-28!106;DOID:0050687!8.84e-25!143;DOID:162!1.70e-12!235;DOID:14566!6.34e-12!239 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.53e-08;1!DOID:10165;1.53e-08;1!DOID:1798;1.53e-08;1!DOID:4430;1.53e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.59e-08,1;DOID:1799,1.71e-08,1;DOID:10165,1.71e-08,1;DOID:1798,1.71e-08,1;DOID:0050687,2.45e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.58e-24!169;UBERON:0000925!9.58e-24!169;UBERON:0006595!9.58e-24!169;UBERON:0000077!7.41e-23!130;UBERON:0004921!9.43e-22!129;UBERON:0004185!9.43e-22!129;UBERON:0001007!1.05e-21!155;UBERON:0001555!1.05e-21!155;UBERON:0007026!1.05e-21!155;UBERON:0009497!2.11e-17!25;UBERON:0000015!2.11e-17!25;UBERON:0002423!2.11e-17!25;UBERON:0006235!2.11e-17!25;UBERON:0004161!2.11e-17!25;UBERON:0005911!1.44e-16!82;UBERON:0001041!4.16e-15!98;UBERON:0003929!1.33e-13!54;UBERON:0008835!1.39e-13!22;UBERON:0003894!1.39e-13!22;UBERON:0009854!7.83e-13!23;UBERON:0005172!8.83e-12!55;UBERON:0005173!8.83e-12!55;UBERON:0007499!1.62e-11!25;UBERON:0005177!1.79e-11!107;UBERON:0001737!3.39e-11!9;UBERON:0009856!6.17e-11!26;UBERON:0003104!9.87e-11!238;UBERON:0009142!9.87e-11!238;UBERON:0000466!1.59e-10!126;UBERON:0009569!2.42e-10!113;UBERON:0002417!5.03e-10!61;UBERON:0000916!5.03e-10!61;UBERON:0001004!1.29e-09!72;UBERON:0002107!1.44e-09!19;UBERON:0006925!1.44e-09!19;UBERON:0008836!1.44e-09!19;UBERON:0002294!2.28e-09!7;UBERON:0001173!2.28e-09!7;UBERON:0004912!2.28e-09!7;UBERON:0008947!2.71e-09!38;UBERON:0003258!2.71e-09!38;UBERON:0000065!3.10e-09!53;UBERON:0001557!6.49e-09!19;UBERON:0000072!4.91e-08!46;UBERON:0005057!1.71e-07!26;UBERON:0000161!4.64e-07!35;UBERON:0002365!4.82e-07!31;UBERON:0002330!4.82e-07!31;UBERON:0001008!5.01e-07!45;UBERON:0001048!5.76e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.13e-32;25!UBERON:0002107;3.93e-29;19!UBERON:0006925;3.93e-29;19!UBERON:0002365;1.43e-17;31!UBERON:0002330;1.43e-17;31!UBERON:0002368;1.90e-14;33!UBERON:0005172;1.46e-12;52!UBERON:0005173;1.46e-12;52!UBERON:0000949;2.31e-11;43!UBERON:0002417;9.51e-09;58!UBERON:0000916;9.51e-09;58!UBERON:0002394;4.08e-08;4!UBERON:0003928;4.08e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,2.46e-37,22;UBERON:0003894,2.46e-37,22;UBERON:0009854,1.24e-35,23;UBERON:0007499,1.24e-32,25;UBERON:0009497,1.24e-32,25;UBERON:0000015,1.24e-32,25;UBERON:0002423,1.24e-32,25;UBERON:0006235,1.24e-32,25;UBERON:0004161,1.24e-32,25;UBERON:0009856,2.63e-31,26;UBERON:0002107,5.15e-29,19;UBERON:0006925,5.15e-29,19;UBERON:0008836,5.15e-29,19;UBERON:0002365,2.90e-17,31;UBERON:0002330,2.90e-17,31;UBERON:0005172,8.57e-17,54;UBERON:0005173,8.57e-17,54;UBERON:0002368,3.91e-15,35;UBERON:0002417,6.73e-15,60;UBERON:0000916,6.73e-15,60;UBERON:0000949,3.44e-14,45;UBERON:0003929,4.33e-14,54;UBERON:0005177,5.52e-13,101;UBERON:0005911,2.67e-12,82;UBERON:0001041,1.87e-11,87;UBERON:0004921,1.46e-10,118;UBERON:0009569,8.23e-10,112;UBERON:0002530,2.03e-08,59;UBERON:0004119,2.95e-08,160;UBERON:0000925,2.95e-08,160;UBERON:0006595,2.95e-08,160;UBERON:0001007,4.34e-08,145;UBERON:0001555,4.34e-08,145;UBERON:0007026,4.34e-08,145;UBERON:0003104,3.79e-07,160;UBERON:0009142,3.79e-07,160;UBERON:0002100,4.28e-07,199 | |||
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| ||
|short_description=p1@OVGP1 | |||
}} | }} |
Latest revision as of 03:18, 16 September 2015
Short description: | p1@OVGP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OVGP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000481495_5end |
EntrezGene: | OVGP1 |
HGNC: | 8524 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.56e-28 | 12 |
germ line cell | 4.90e-10 | 7 |
germ cell | 4.90e-10 | 7 |
peptide hormone secreting cell | 1.59e-08 | 1 |
enteroendocrine cell | 1.59e-08 | 1 |
type D enteroendocrine cell | 1.59e-08 | 1 |
somatostatin secreting cell | 1.59e-08 | 1 |
pancreatic D cell | 1.59e-08 | 1 |
progenitor cell of endocrine pancreas | 1.59e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.59e-08 | 1 |
islet cell tumor | 1.71e-08 | 1 |
endocrine pancreas cancer | 1.71e-08 | 1 |
pancreatic endocrine carcinoma | 1.71e-08 | 1 |
cell type cancer | 2.45e-08 | 143 |