FFCP PHASE1:Hg19::chr17:48610112..48610134,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55040 | |EntrezGene=55040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18235 | |HGNC=18235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000504857,ENST00000510045_5end | |association_with_transcript=0bp_to_ENST00000504857,ENST00000510045_5end | ||
|cluster_id=chr17:48610112..48610134,+ | |||
|description=CAGE_peak_3_at_EPN3_5end | |description=CAGE_peak_3_at_EPN3_5end | ||
|id=chr17:48610112..48610134,+ | |id=chr17:48610112..48610134,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.06e-22!43;CL:0000066!3.69e-16!254;CL:0000223!1.84e-15!59;CL:0002368!8.49e-12!13;CL:0002251!1.37e-10!21;CL:0002202!9.02e-09!9;CL:0002632!9.02e-09!9;CL:0002159!1.37e-08!13 | |ontology_enrichment_celltype=CL:0002076!1.06e-22!43;CL:0000066!3.69e-16!254;CL:0000223!1.84e-15!59;CL:0002368!8.49e-12!13;CL:0002251!1.37e-10!21;CL:0002202!9.02e-09!9;CL:0002632!9.02e-09!9;CL:0002159!1.37e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.80e-21;42!CL:0002368;8.81e-15;13!CL:0002202;1.18e-12;9!CL:0002632;1.18e-12;9!CL:0002251;4.98e-12;20!CL:0002159;1.08e-11;14!CL:0002327;9.91e-08;4!CL:0000082;4.77e-07;19!CL:0000307;5.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.21e-27,42;CL:0000066,3.66e-19,253;CL:0000223,1.02e-18,58;CL:0002368,7.63e-15,13;CL:0002202,1.19e-12,9;CL:0002632,1.19e-12,9;CL:0002251,4.27e-12,20;CL:0002159,1.08e-11,14;CL:0002327,9.10e-08,4;CL:0000082,4.32e-07,19;CL:0000068,6.06e-07,3;CL:0000069,6.06e-07,3;CL:0000307,6.06e-07,3;CL:0000377,6.06e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;7.78e-10;58!CL:0000377;5.88e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!8.29e-12!14;DOID:305!1.45e-08!106;DOID:299!8.13e-07!25 | |ontology_enrichment_disease=DOID:1749!8.29e-12!14;DOID:305!1.45e-08!106;DOID:299!8.13e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;5.55e-13;14!DOID:5093;1.48e-08;4!DOID:1612;1.48e-08;4!DOID:299;2.24e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.91e-13,14;DOID:305,6.50e-11,106;DOID:5093,1.39e-08,4;DOID:1612,1.39e-08,4;DOID:299,2.07e-07,25;DOID:0050687,2.25e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.96e-19!169;UBERON:0000925!3.96e-19!169;UBERON:0006595!3.96e-19!169;UBERON:0007023!1.72e-15!115;UBERON:0001007!3.46e-14!155;UBERON:0001555!3.46e-14!155;UBERON:0007026!3.46e-14!155;UBERON:0001004!4.15e-14!72;UBERON:0004921!7.34e-12!129;UBERON:0004185!7.34e-12!129;UBERON:0000161!1.48e-11!35;UBERON:0000077!1.70e-11!130;UBERON:0000166!1.04e-09!21;UBERON:0005153!3.10e-09!37;UBERON:0000062!3.37e-09!511;UBERON:0000065!4.28e-09!53;UBERON:0005178!6.91e-09!34;UBERON:0002224!6.91e-09!34;UBERON:0000064!8.19e-09!219;UBERON:0000468!8.49e-09!659;UBERON:0005157!1.45e-08!51;UBERON:0000922!1.57e-08!612;UBERON:0005181!1.86e-08!35;UBERON:0000464!2.61e-08!104;UBERON:0005911!7.98e-08!82;UBERON:0004121!1.24e-07!169;UBERON:0000915!1.27e-07!52;UBERON:0007196!1.69e-07!14;UBERON:0001558!1.69e-07!14;UBERON:0000165!3.55e-07!28;UBERON:0000930!3.55e-07!28;UBERON:0000924!4.05e-07!173;UBERON:0006601!4.05e-07!173;UBERON:0001041!4.45e-07!98;UBERON:0000344!5.00e-07!12 | |ontology_enrichment_uberon=UBERON:0004119!3.96e-19!169;UBERON:0000925!3.96e-19!169;UBERON:0006595!3.96e-19!169;UBERON:0007023!1.72e-15!115;UBERON:0001007!3.46e-14!155;UBERON:0001555!3.46e-14!155;UBERON:0007026!3.46e-14!155;UBERON:0001004!4.15e-14!72;UBERON:0004921!7.34e-12!129;UBERON:0004185!7.34e-12!129;UBERON:0000161!1.48e-11!35;UBERON:0000077!1.70e-11!130;UBERON:0000166!1.04e-09!21;UBERON:0005153!3.10e-09!37;UBERON:0000062!3.37e-09!511;UBERON:0000065!4.28e-09!53;UBERON:0005178!6.91e-09!34;UBERON:0002224!6.91e-09!34;UBERON:0000064!8.19e-09!219;UBERON:0000468!8.49e-09!659;UBERON:0005157!1.45e-08!51;UBERON:0000922!1.57e-08!612;UBERON:0005181!1.86e-08!35;UBERON:0000464!2.61e-08!104;UBERON:0005911!7.98e-08!82;UBERON:0004121!1.24e-07!169;UBERON:0000915!1.27e-07!52;UBERON:0007196!1.69e-07!14;UBERON:0001558!1.69e-07!14;UBERON:0000165!3.55e-07!28;UBERON:0000930!3.55e-07!28;UBERON:0000924!4.05e-07!173;UBERON:0006601!4.05e-07!173;UBERON:0001041!4.45e-07!98;UBERON:0000344!5.00e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004807;2.03e-10;22!UBERON:0007196;2.15e-10;15!UBERON:0001558;2.15e-10;15!UBERON:0005178;3.95e-10;34!UBERON:0002224;3.95e-10;34!UBERON:0000344;4.16e-10;20!UBERON:0005911;9.18e-10;36!UBERON:0000165;2.47e-09;28!UBERON:0000161;2.48e-09;19!UBERON:0000166;2.48e-09;19!UBERON:0005181;2.55e-09;35!UBERON:0001555;1.04e-08;54!UBERON:0001911;9.91e-08;4!UBERON:0004921;9.98e-08;33!UBERON:0003350;1.33e-07;8!UBERON:0003729;2.05e-07;13!UBERON:0000974;2.75e-07;6!UBERON:0003343;3.18e-07;4!UBERON:0004785;3.18e-07;4!UBERON:0004802;4.77e-07;19!UBERON:0000115;4.77e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.31e-20,160;UBERON:0000925,1.31e-20,160;UBERON:0006595,1.31e-20,160;UBERON:0001007,2.97e-16,145;UBERON:0001555,2.97e-16,145;UBERON:0007026,2.97e-16,145;UBERON:0001004,3.52e-15,74;UBERON:0000161,1.27e-12,36;UBERON:0004921,1.32e-12,118;UBERON:0000166,3.82e-11,22;UBERON:0005178,7.58e-11,34;UBERON:0002224,7.58e-11,34;UBERON:0005181,2.10e-10,35;UBERON:0005153,2.16e-10,37;UBERON:0007196,2.27e-10,15;UBERON:0001558,2.27e-10,15;UBERON:0000344,3.55e-10,20;UBERON:0000915,8.73e-10,52;UBERON:0000065,1.35e-09,54;UBERON:0005157,2.04e-09,47;UBERON:0003102,2.31e-09,99;UBERON:0000165,6.40e-09,29;UBERON:0000930,6.40e-09,29;UBERON:0004175,7.15e-09,25;UBERON:0000072,1.49e-08,47;UBERON:0001041,4.35e-08,87;UBERON:0001911,9.10e-08,4;UBERON:0005333,9.10e-08,4;UBERON:0008425,9.10e-08,4;UBERON:0005311,9.10e-08,4;UBERON:0005911,1.28e-07,82;UBERON:0003350,1.33e-07,8;UBERON:0004807,1.66e-07,28;UBERON:0000033,1.89e-07,56;UBERON:0003729,1.89e-07,13;UBERON:0003343,2.48e-07,4;UBERON:0004785,2.48e-07,4;UBERON:0000153,4.05e-07,62;UBERON:0007811,4.05e-07,62;UBERON:0004802,4.32e-07,19;UBERON:0000115,4.32e-07,19 | |||
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| ||
|short_description=p3@EPN3 | |short_description=p3@EPN3 | ||
}} | }} |
Latest revision as of 03:02, 16 September 2015
Short description: | p3@EPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EPN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000504857, ENST00000510045_5end |
EntrezGene: | EPN3 |
HGNC: | 18235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.21e-27 | 42 |
epithelial cell | 3.66e-19 | 253 |
endodermal cell | 1.02e-18 | 58 |
respiratory epithelial cell | 7.63e-15 | 13 |
epithelial cell of tracheobronchial tree | 1.19e-12 | 9 |
epithelial cell of lower respiratory tract | 1.19e-12 | 9 |
epithelial cell of alimentary canal | 4.27e-12 | 20 |
general ecto-epithelial cell | 1.08e-11 | 14 |
mammary gland epithelial cell | 9.10e-08 | 4 |
epithelial cell of lung | 4.32e-07 | 19 |
duct epithelial cell | 6.06e-07 | 3 |
branched duct epithelial cell | 6.06e-07 | 3 |
tracheal epithelial cell | 6.06e-07 | 3 |
tracheoblast | 6.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.91e-13 | 14 |
carcinoma | 6.50e-11 | 106 |
thoracic cancer | 1.39e-08 | 4 |
breast cancer | 1.39e-08 | 4 |
adenocarcinoma | 2.07e-07 | 25 |
cell type cancer | 2.25e-07 | 143 |