FFCP PHASE1:Hg19::chr17:48610042..48610069,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55040 | |EntrezGene=55040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18235 | |HGNC=18235 | ||
|TSSclassifier=strong | |||
|UniProt=D6REL6,Q9H201 | |UniProt=D6REL6,Q9H201 | ||
|association_with_transcript=0bp_to_ENST00000503246,NM_017957,uc002ira.3,uc010wms.1_5end | |association_with_transcript=0bp_to_ENST00000503246,NM_017957,uc002ira.3,uc010wms.1_5end | ||
|cluster_id=chr17:48610042..48610069,+ | |||
|coexpression_cluster_id=C1217 | |coexpression_cluster_id=C1217 | ||
|description=CAGE_peak_4_at_EPN3_5end | |description=CAGE_peak_4_at_EPN3_5end | ||
|id=chr17:48610042..48610069,+ | |id=chr17:48610042..48610069,+ | ||
|ontology_enrichment_celltype=CL:0002076!5.42e-14!43;CL:0000066!3.39e-10!254;CL:0000223!2.08e-09!59;CL:0002368!2.64e-08!13;CL:0002251!1.32e-07!21;CL:0002159!2.89e-07!13;CL:0002202!6.19e-07!9;CL:0002632!6.19e-07!9 | |ontology_enrichment_celltype=CL:0002076!5.42e-14!43;CL:0000066!3.39e-10!254;CL:0000223!2.08e-09!59;CL:0002368!2.64e-08!13;CL:0002251!1.32e-07!21;CL:0002159!2.89e-07!13;CL:0002202!6.19e-07!9;CL:0002632!6.19e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002327;1.23e-11;4!CL:0002202;8.96e-11;9!CL:0002632;8.96e-11;9!CL:0002166;8.80e-10;3!CL:0002368;9.50e-10;13!CL:0002621;1.25e-09;3!CL:0002159;2.04e-09;14!CL:0000307;2.11e-09;3!CL:0002328;7.34e-09;3!CL:0000240;1.16e-07;6!CL:0000311;1.16e-07;6!CL:0000079;1.16e-07;6!CL:0000237;1.16e-07;6!CL:0002076;9.32e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.42e-11,4;CL:0002202,7.49e-11,9;CL:0002632,7.49e-11,9;CL:0002368,8.08e-10,13;CL:0002166,8.83e-10,3;CL:0002621,1.14e-09,3;CL:0000068,1.89e-09,3;CL:0000069,1.89e-09,3;CL:0000307,1.89e-09,3;CL:0000377,1.89e-09,3;CL:0002159,2.08e-09,14;CL:0002328,6.17e-09,3;CL:0002076,4.35e-08,42;CL:0000240,1.43e-07,6;CL:0000311,1.43e-07,6;CL:0000079,1.43e-07,6;CL:0000237,1.43e-07,6;CL:0000036,1.43e-07,6;CL:0000357,1.43e-07,6;CL:0000114,1.43e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000377;2.11e-09;3!CL:0000357;1.16e-07;6!CL:0000114;1.16e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!2.81e-08!14 | |ontology_enrichment_disease=DOID:1749!2.81e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.23e-32!115;UBERON:0001049!3.22e-18!57;UBERON:0005068!3.22e-18!57;UBERON:0006241!3.22e-18!57;UBERON:0007135!3.22e-18!57;UBERON:0004121!3.67e-16!169;UBERON:0000924!2.59e-15!173;UBERON:0006601!2.59e-15!173;UBERON:0002616!6.89e-15!59;UBERON:0001017!9.42e-15!82;UBERON:0000153!1.40e-14!129;UBERON:0007811!1.40e-14!129;UBERON:0005743!3.17e-14!86;UBERON:0000033!7.37e-14!123;UBERON:0001950!1.09e-13!20;UBERON:0002780!1.34e-13!41;UBERON:0001890!1.34e-13!41;UBERON:0006240!1.34e-13!41;UBERON:0002619!2.73e-13!22;UBERON:0000062!3.71e-13!511;UBERON:0003080!4.40e-13!42;UBERON:0003075!5.67e-13!86;UBERON:0007284!5.67e-13!86;UBERON:0000955!6.55e-13!69;UBERON:0006238!6.55e-13!69;UBERON:0000064!1.04e-12!219;UBERON:0001893!3.05e-12!34;UBERON:0002020!3.55e-12!34;UBERON:0003528!3.55e-12!34;UBERON:0001869!5.14e-12!32;UBERON:0002346!7.62e-12!90;UBERON:0000073!1.13e-11!94;UBERON:0001016!1.13e-11!94;UBERON:0004111!1.14e-11!241;UBERON:0002791!2.21e-11!33;UBERON:0000481!3.83e-11!347;UBERON:0000956!4.29e-11!25;UBERON:0000203!4.29e-11!25;UBERON:0000475!1.07e-10!365;UBERON:0000468!8.03e-10!659;UBERON:0000922!1.10e-09!612;UBERON:0000467!1.72e-09!625;UBERON:0000480!2.07e-09!626;UBERON:0000483!2.47e-09!309;UBERON:0000119!5.07e-09!312;UBERON:0000923!9.26e-09!604;UBERON:0005291!9.26e-09!604;UBERON:0006598!9.26e-09!604;UBERON:0002532!9.26e-09!604;UBERON:0002050!1.11e-08!605;UBERON:0005423!1.11e-08!605;UBERON:0000477!1.81e-08!286;UBERON:0004119!2.09e-08!169;UBERON:0000925!2.09e-08!169;UBERON:0006595!2.09e-08!169;UBERON:0001004!5.79e-08!72;UBERON:0003056!5.96e-08!61;UBERON:0000025!1.13e-07!194;UBERON:0000200!1.17e-07!6;UBERON:0001007!5.21e-07!155;UBERON:0001555!5.21e-07!155;UBERON:0007026!5.21e-07!155 | |ontology_enrichment_uberon=UBERON:0007023!1.23e-32!115;UBERON:0001049!3.22e-18!57;UBERON:0005068!3.22e-18!57;UBERON:0006241!3.22e-18!57;UBERON:0007135!3.22e-18!57;UBERON:0004121!3.67e-16!169;UBERON:0000924!2.59e-15!173;UBERON:0006601!2.59e-15!173;UBERON:0002616!6.89e-15!59;UBERON:0001017!9.42e-15!82;UBERON:0000153!1.40e-14!129;UBERON:0007811!1.40e-14!129;UBERON:0005743!3.17e-14!86;UBERON:0000033!7.37e-14!123;UBERON:0001950!1.09e-13!20;UBERON:0002780!1.34e-13!41;UBERON:0001890!1.34e-13!41;UBERON:0006240!1.34e-13!41;UBERON:0002619!2.73e-13!22;UBERON:0000062!3.71e-13!511;UBERON:0003080!4.40e-13!42;UBERON:0003075!5.67e-13!86;UBERON:0007284!5.67e-13!86;UBERON:0000955!6.55e-13!69;UBERON:0006238!6.55e-13!69;UBERON:0000064!1.04e-12!219;UBERON:0001893!3.05e-12!34;UBERON:0002020!3.55e-12!34;UBERON:0003528!3.55e-12!34;UBERON:0001869!5.14e-12!32;UBERON:0002346!7.62e-12!90;UBERON:0000073!1.13e-11!94;UBERON:0001016!1.13e-11!94;UBERON:0004111!1.14e-11!241;UBERON:0002791!2.21e-11!33;UBERON:0000481!3.83e-11!347;UBERON:0000956!4.29e-11!25;UBERON:0000203!4.29e-11!25;UBERON:0000475!1.07e-10!365;UBERON:0000468!8.03e-10!659;UBERON:0000922!1.10e-09!612;UBERON:0000467!1.72e-09!625;UBERON:0000480!2.07e-09!626;UBERON:0000483!2.47e-09!309;UBERON:0000119!5.07e-09!312;UBERON:0000923!9.26e-09!604;UBERON:0005291!9.26e-09!604;UBERON:0006598!9.26e-09!604;UBERON:0002532!9.26e-09!604;UBERON:0002050!1.11e-08!605;UBERON:0005423!1.11e-08!605;UBERON:0000477!1.81e-08!286;UBERON:0004119!2.09e-08!169;UBERON:0000925!2.09e-08!169;UBERON:0006595!2.09e-08!169;UBERON:0001004!5.79e-08!72;UBERON:0003056!5.96e-08!61;UBERON:0000025!1.13e-07!194;UBERON:0000200!1.17e-07!6;UBERON:0001007!5.21e-07!155;UBERON:0001555!5.21e-07!155;UBERON:0007026!5.21e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.34e-13;20!UBERON:0002619;1.17e-11;22!UBERON:0001911;1.23e-11;4!UBERON:0000956;4.90e-10;25!UBERON:0000203;4.90e-10;25!UBERON:0001949;1.25e-09;3!UBERON:0001893;3.21e-09;34!UBERON:0001872;5.68e-09;5!UBERON:0004815;7.34e-09;3!UBERON:0002031;7.34e-09;3!UBERON:0003528;3.49e-08;34!UBERON:0002020;3.49e-08;34!UBERON:0001869;3.70e-08;32!UBERON:0002780;9.44e-08;41!UBERON:0001890;9.44e-08;41!UBERON:0002298;1.28e-07;6!UBERON:0001708;2.08e-07;4!UBERON:0008895;2.08e-07;4!UBERON:0000200;2.69e-07;6!UBERON:0000073;6.58e-07;53!UBERON:0002616;6.58e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.33e-19,104;UBERON:0007023,3.86e-19,114;UBERON:0001049,1.56e-13,56;UBERON:0005068,1.56e-13,56;UBERON:0006241,1.56e-13,56;UBERON:0007135,1.56e-13,56;UBERON:0000073,5.66e-13,53;UBERON:0002616,5.66e-13,53;UBERON:0001950,5.83e-13,20;UBERON:0004121,1.87e-12,171;UBERON:0000924,1.87e-12,171;UBERON:0006601,1.87e-12,171;UBERON:0002619,1.27e-11,22;UBERON:0001911,1.42e-11,4;UBERON:0005333,1.42e-11,4;UBERON:0008425,1.42e-11,4;UBERON:0005311,1.42e-11,4;UBERON:0000955,2.55e-11,68;UBERON:0006238,2.55e-11,68;UBERON:0001017,7.27e-11,81;UBERON:0002780,1.38e-10,41;UBERON:0001890,1.38e-10,41;UBERON:0003080,1.38e-10,41;UBERON:0006240,1.38e-10,41;UBERON:0000956,5.24e-10,25;UBERON:0000203,5.24e-10,25;UBERON:0003075,6.54e-10,82;UBERON:0007284,6.54e-10,82;UBERON:0001893,1.07e-09,34;UBERON:0001949,1.14e-09,3;UBERON:0001016,2.97e-09,89;UBERON:0002346,3.29e-09,86;UBERON:0004815,6.17e-09,3;UBERON:0002031,6.17e-09,3;UBERON:0001869,6.66e-09,32;UBERON:0001872,7.71e-09,5;UBERON:0010314,1.32e-08,132;UBERON:0011216,1.32e-08,223;UBERON:0003528,2.61e-08,34;UBERON:0002020,2.61e-08,34;UBERON:0000483,1.11e-07,306;UBERON:0002298,1.29e-07,6;UBERON:0000119,1.68e-07,309;UBERON:0001708,2.09e-07,4;UBERON:0008895,2.09e-07,4;UBERON:0002791,2.13e-07,32;UBERON:0000025,3.13e-07,192;UBERON:0000200,3.15e-07,6 | |||
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| ||
|short_description=p4@EPN3 | |short_description=p4@EPN3 | ||
}} | }} |
Latest revision as of 03:01, 16 September 2015
Short description: | p4@EPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EPN3_5end |
Coexpression cluster: | C1217_Mammary_Keratinocyte_Mallassezderived_Bronchial_Tracheal_Gingival_Sebocyte |
Association with transcript: | 0bp_to_ENST00000503246, NM_017957, uc002ira.3, uc010wms.1_5end |
EntrezGene: | EPN3 |
HGNC: | 18235 |
UniProt: | D6REL6Q9H201 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.42e-11 | 4 |
epithelial cell of tracheobronchial tree | 7.49e-11 | 9 |
epithelial cell of lower respiratory tract | 7.49e-11 | 9 |
respiratory epithelial cell | 8.08e-10 | 13 |
epithelial cell of Malassez | 8.83e-10 | 3 |
gingival epithelial cell | 1.14e-09 | 3 |
duct epithelial cell | 1.89e-09 | 3 |
branched duct epithelial cell | 1.89e-09 | 3 |
tracheal epithelial cell | 1.89e-09 | 3 |
tracheoblast | 1.89e-09 | 3 |
general ecto-epithelial cell | 2.08e-09 | 14 |
bronchial epithelial cell | 6.17e-09 | 3 |
endo-epithelial cell | 4.35e-08 | 42 |
stratified squamous epithelial cell | 1.43e-07 | 6 |
keratin accumulating cell | 1.43e-07 | 6 |
stratified epithelial cell | 1.43e-07 | 6 |
keratinizing barrier epithelial cell | 1.43e-07 | 6 |
epithelial fate stem cell | 1.43e-07 | 6 |
stratified epithelial stem cell | 1.43e-07 | 6 |
surface ectodermal cell | 1.43e-07 | 6 |