FFCP PHASE1:Hg19::chr20:36694510..36694517,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58490 | |EntrezGene=58490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=16209 | |HGNC=16209 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_uc002xhp.3_5end | |association_with_transcript=39bp_to_uc002xhp.3_5end | ||
|cluster_id=chr20:36694510..36694517,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_29_at_RPRD1B_5end | |description=CAGE_peak_29_at_RPRD1B_5end | ||
|id=chr20:36694510..36694517,+ | |id=chr20:36694510..36694517,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.17e-09!12;CL:0000417!2.17e-09!12;CL:0000668!2.17e-09!12;CL:0000414!2.17e-09!12;CL:0000412!2.17e-09!12;CL:0000182!2.17e-09!12;CL:0000864!3.11e-08!1;CL:0000091!3.11e-08!1;CL:0000819!4.40e-08!1 | |ontology_enrichment_celltype=CL:0000181!2.17e-09!12;CL:0000417!2.17e-09!12;CL:0000668!2.17e-09!12;CL:0000414!2.17e-09!12;CL:0000412!2.17e-09!12;CL:0000182!2.17e-09!12;CL:0000864!3.11e-08!1;CL:0000091!3.11e-08!1;CL:0000819!4.40e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.71e-30;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.71e-30,12;CL:0000223,6.27e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.48e-40;1!CL:0000223;6.82e-07;58 | |||
|ontology_enrichment_disease=DOID:3571!3.11e-08!1;DOID:0060073!4.40e-08!1;DOID:8675!4.40e-08!1 | |ontology_enrichment_disease=DOID:3571!3.11e-08!1;DOID:0060073!4.40e-08!1;DOID:8675!4.40e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!5.71e-14!23;UBERON:0002107!1.26e-12!19;UBERON:0006925!1.26e-12!19;UBERON:0008836!1.26e-12!19;UBERON:0009856!2.94e-12!26;UBERON:0008835!7.87e-11!22;UBERON:0003894!7.87e-11!22;UBERON:0002365!5.28e-10!31;UBERON:0002330!5.28e-10!31;UBERON:0007499!1.83e-09!25;UBERON:0009497!1.83e-09!25;UBERON:0000015!1.83e-09!25;UBERON:0002423!1.83e-09!25;UBERON:0006235!1.83e-09!25;UBERON:0004161!1.83e-09!25;UBERON:0005057!4.46e-09!26;UBERON:0001154!1.91e-08!1;UBERON:0001153!1.91e-08!1;UBERON:0002372!2.35e-08!1;UBERON:0001961!2.35e-08!1;UBERON:0001744!2.35e-08!1;UBERON:0001735!2.35e-08!1;UBERON:0000989!2.90e-08!1;UBERON:0008811!2.90e-08!1;UBERON:0006258!2.90e-08!1;UBERON:0005876!2.90e-08!1;UBERON:0004874!2.90e-08!1;UBERON:0002022!1.21e-07!1;UBERON:0005172!7.87e-07!55;UBERON:0005173!7.87e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.48e-40;1!UBERON:0001153;1.48e-40;1!UBERON:0009854;1.48e-40;1!UBERON:0002107;8.34e-34;19!UBERON:0006925;8.34e-34;19!UBERON:0002423;6.54e-26;25!UBERON:0002365;9.79e-22;31!UBERON:0002330;9.79e-22;31!UBERON:0002368;1.79e-17;33!UBERON:0000949;1.21e-14;43!UBERON:0001007;1.76e-12;81!UBERON:0009856;3.10e-11;4!UBERON:0005172;9.31e-11;52!UBERON:0005173;9.31e-11;52!UBERON:0004907;2.97e-09;5!UBERON:0002530;4.48e-08;57!UBERON:0002417;2.11e-07;58!UBERON:0000916;2.11e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.60e-43,23;UBERON:0001154,1.48e-40,1;UBERON:0001153,1.48e-40,1;UBERON:0001045,1.48e-40,1;UBERON:0009856,2.01e-38,26;UBERON:0002107,8.35e-34,19;UBERON:0006925,8.35e-34,19;UBERON:0008836,8.35e-34,19;UBERON:0008835,2.54e-29,22;UBERON:0003894,2.54e-29,22;UBERON:0007499,6.54e-26,25;UBERON:0009497,6.54e-26,25;UBERON:0000015,6.54e-26,25;UBERON:0002423,6.54e-26,25;UBERON:0006235,6.54e-26,25;UBERON:0004161,6.54e-26,25;UBERON:0002365,4.62e-21,31;UBERON:0002330,4.62e-21,31;UBERON:0002368,9.52e-19,35;UBERON:0000949,9.38e-15,45;UBERON:0003929,2.04e-12,54;UBERON:0005172,2.04e-12,54;UBERON:0005173,2.04e-12,54;UBERON:0002530,2.01e-11,59;UBERON:0002417,3.04e-11,60;UBERON:0000916,3.04e-11,60;UBERON:0004907,2.97e-09,5;UBERON:0004921,6.01e-09,118;UBERON:0005911,2.13e-08,82;UBERON:0001041,5.98e-08,87;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0005177,6.30e-07,101;UBERON:0003104,8.66e-07,160;UBERON:0009142,8.66e-07,160;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p29@RPRD1B | |short_description=p29@RPRD1B | ||
}} | }} |
Latest revision as of 02:40, 16 September 2015
Short description: | p29@RPRD1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_RPRD1B_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 39bp_to_uc002xhp.3_5end |
EntrezGene: | RPRD1B |
HGNC: | 16209 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.71e-30 | 12 |
endodermal cell | 6.27e-07 | 58 |