FFCP PHASE1:Hg19::chr1:227505905..227505906,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8476 | |EntrezGene=8476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1737 | |HGNC=1737 | ||
|TSSclassifier=strong | |||
|UniProt=E9PEF7,Q5VT25 | |UniProt=E9PEF7,Q5VT25 | ||
|association_with_transcript=-79bp_to_ENST00000334218,ENST00000366762,ENST00000366764,ENST00000366766,NM_003607,NM_014826,uc001hqr.2,uc001hqs.2,uc009xes.2,uc010pvs.1_5end | |association_with_transcript=-79bp_to_ENST00000334218,ENST00000366762,ENST00000366764,ENST00000366766,NM_003607,NM_014826,uc001hqr.2,uc001hqs.2,uc009xes.2,uc010pvs.1_5end | ||
|cluster_id=chr1:227505905..227505906,- | |||
|description=CAGE_peak_43_at_CDC42BPA_5end | |description=CAGE_peak_43_at_CDC42BPA_5end | ||
|id=chr1:227505905..227505906,- | |id=chr1:227505905..227505906,- | ||
|ontology_enrichment_celltype=CL:0000039!7.92e-07!7;CL:0000586!7.92e-07!7 | |ontology_enrichment_celltype=CL:0000039!7.92e-07!7;CL:0000586!7.92e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.55e-98;1!CL:0002625;1.55e-98;1!CL:0000216;1.55e-98;1!CL:0000154;8.34e-18;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,9.37e-99,1;CL:0002625,9.37e-99,1;CL:0000216,9.37e-99,1;CL:0000154,7.67e-18,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!2.53e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.76e-15!115;UBERON:0003135!1.12e-09!11;UBERON:0000473!1.57e-09!8;UBERON:0003101!1.83e-09!22;UBERON:0000079!1.83e-09!22;UBERON:0000991!4.18e-08!21;UBERON:0009196!4.18e-08!21;UBERON:0009117!4.18e-08!21;UBERON:0005564!4.18e-08!21;UBERON:0004176!1.13e-07!22;UBERON:0005156!9.18e-07!59;UBERON:0000990!9.18e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.55e-98;1!UBERON:0001343;1.55e-98;1!UBERON:0004910;1.55e-98;1!UBERON:0004813;1.55e-98;1!UBERON:0004909;3.52e-50;2!UBERON:0005904;6.30e-26;4!UBERON:0000473;1.00e-13;8!UBERON:0001155;2.31e-12;9!UBERON:0000058;2.87e-11;10!UBERON:0003135;2.27e-10;11!UBERON:0000059;2.27e-10;11!UBERON:0000160;7.39e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,9.37e-99,1;UBERON:0001343,9.37e-99,1;UBERON:0004910,9.37e-99,1;UBERON:0005154,9.37e-99,1;UBERON:0005295,9.37e-99,1;UBERON:0004813,9.37e-99,1;UBERON:0005297,9.37e-99,1;UBERON:0005294,9.37e-99,1;UBERON:0010141,9.37e-99,1;UBERON:0005891,9.37e-99,1;UBERON:0004909,2.74e-50,2;UBERON:0005904,5.56e-26,4;UBERON:0000473,9.39e-14,8;UBERON:0004871,9.39e-14,8;UBERON:0001155,2.45e-12,9;UBERON:0003135,2.16e-10,11;UBERON:0004876,2.16e-10,11;UBERON:0000059,2.37e-10,11;UBERON:0004122,5.55e-08,15;UBERON:0000160,7.60e-07,17 | |||
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| ||
|short_description=p43@CDC42BPA | |short_description=p43@CDC42BPA | ||
}} | }} |
Latest revision as of 02:35, 16 September 2015
Short description: | p43@CDC42BPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_43_at_CDC42BPA_5end |
Coexpression cluster: | NA |
Association with transcript: | -79bp_to_ENST00000334218, ENST00000366762, ENST00000366764, ENST00000366766, NM_003607, NM_014826, uc001hqr.2, uc001hqs.2, uc009xes.2, uc010pvs.1_5end |
EntrezGene: | CDC42BPA |
HGNC: | 1737 |
UniProt: | E9PEF7Q5VT25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 9.37e-99 | 1 |
seminiferous tubule epithelial cell | 9.37e-99 | 1 |
Sertoli cell | 9.37e-99 | 1 |
protein secreting cell | 7.67e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 9.37e-99 | 1 |
seminiferous tubule of testis | 9.37e-99 | 1 |
epithelium of male gonad | 9.37e-99 | 1 |
epithelial cord | 9.37e-99 | 1 |
sex cord | 9.37e-99 | 1 |
seminiferous tubule epithelium | 9.37e-99 | 1 |
testis sex cord | 9.37e-99 | 1 |
genital ridge | 9.37e-99 | 1 |
primitive sex cord of indifferent gonad | 9.37e-99 | 1 |
coelomic epithelium | 9.37e-99 | 1 |
epithelium of gonad | 2.74e-50 | 2 |
duct of male reproductive system | 5.56e-26 | 4 |
testis | 9.39e-14 | 8 |
somatic layer of lateral plate mesoderm | 9.39e-14 | 8 |
colon | 2.45e-12 | 9 |
male reproductive organ | 2.16e-10 | 11 |
urogenital ridge | 2.16e-10 | 11 |
large intestine | 2.37e-10 | 11 |
genitourinary system | 5.55e-08 | 15 |
intestine | 7.60e-07 | 17 |