FFCP PHASE1:Hg19::chrX:55246771..55246793,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:55246771..55246793,+
|short_description=p1@PAGE5
|description=CAGE_peak_1_at_PAGE5_5end
|association_with_transcript=0bp_to_ENST00000289619,ENST00000374955...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90737 | |EntrezGene=90737 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29992 | |HGNC=29992 | ||
|TSSclassifier=strong | |||
|UniProt=Q96GU1,Q5JUL0 | |UniProt=Q96GU1,Q5JUL0 | ||
|association_with_transcript=0bp_to_ENST00000289619,ENST00000374955,NM_001013435,NM_130467,uc004duj.2,uc004duk.2_5end | |||
|cluster_id=chrX:55246771..55246793,+ | |||
|coexpression_cluster_id=C4876 | |||
|description=CAGE_peak_1_at_PAGE5_5end | |||
|id=chrX:55246771..55246793,+ | |||
|ontology_enrichment_celltype=CL:0000084!3.44e-15!25;CL:0000827!3.44e-15!25;CL:0000791!1.24e-14!18;CL:0000789!1.24e-14!18;CL:0002420!1.24e-14!18;CL:0002419!1.24e-14!18;CL:0000790!1.24e-14!18;CL:0000838!1.91e-11!52;CL:0000542!4.05e-11!53;CL:0000051!4.05e-11!53;CL:0000625!2.45e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000054;7.52e-10;2!CL:0000137;7.52e-10;2!CL:0000092;7.52e-10;2!CL:0002178;9.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,7.69e-10,2;CL:0000137,7.69e-10,2;CL:0000092,7.69e-10,2;CL:0002178,9.63e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.05e-07!51;DOID:0060083!5.05e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.86e-13;8!DOID:200;7.52e-10;2!DOID:4305;7.52e-10;2!DOID:2531;1.28e-08;51!DOID:0060083;1.28e-08;51!DOID:1240;1.67e-07;39!DOID:201;3.76e-07;6!DOID:0060100;3.76e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.86e-13,8;DOID:2531,3.80e-11,51;DOID:0060083,3.80e-11,51;DOID:162,6.70e-10,235;DOID:200,7.69e-10,2;DOID:4305,7.69e-10,2;DOID:14566,1.50e-09,239;DOID:1240,6.82e-09,39;DOID:0050686,1.82e-08,137;DOID:201,3.80e-07,6;DOID:0060100,3.80e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@PAGE5 | |||
}} | }} |
Latest revision as of 01:48, 16 September 2015
Short description: | p1@PAGE5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAGE5_5end |
Coexpression cluster: | C4876_lymphangiectasia_NK_bronchioalveolar_fibrosarcoma_thyroid_fibrous_cholangiocellular |
Association with transcript: | 0bp_to_ENST00000289619, ENST00000374955, NM_001013435, NM_130467, uc004duj.2, uc004duk.2_5end |
EntrezGene: | PAGE5 |
HGNC: | 29992 |
UniProt: | Q96GU1Q5JUL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 7.69e-10 | 2 |
osteocyte | 7.69e-10 | 2 |
osteoclast | 7.69e-10 | 2 |
epithelial cell of stomach | 9.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.86e-13 | 8 |
hematologic cancer | 3.80e-11 | 51 |
immune system cancer | 3.80e-11 | 51 |
cancer | 6.70e-10 | 235 |
giant cell tumor | 7.69e-10 | 2 |
bone giant cell tumor | 7.69e-10 | 2 |
disease of cellular proliferation | 1.50e-09 | 239 |
leukemia | 6.82e-09 | 39 |
organ system cancer | 1.82e-08 | 137 |
connective tissue cancer | 3.80e-07 | 6 |
musculoskeletal system cancer | 3.80e-07 | 6 |