FFCP PHASE1:Hg19::chr1:111174054..111174067,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:111174054..111174067,-
|short_description=p12@KCNA2
|description=CAGE_peak_12_at_KCNA2_5end
|association_with_transcript=28bp_to_ENST00000369770,NM_0012042...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3737 | |EntrezGene=3737 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6220 | |HGNC=6220 | ||
|TSSclassifier=strong | |||
|UniProt=Q86XG6,A8K1Z6 | |UniProt=Q86XG6,A8K1Z6 | ||
|association_with_transcript=28bp_to_ENST00000369770,NM_001204269,uc009wfv.1_5end | |||
|cluster_id=chr1:111174054..111174067,- | |||
|description=CAGE_peak_12_at_KCNA2_5end | |||
|id=chr1:111174054..111174067,- | |||
|ontology_enrichment_celltype=CL:0000838!2.37e-33!52;CL:0000542!1.33e-32!53;CL:0000051!1.33e-32!53;CL:0000791!1.14e-30!18;CL:0000789!1.14e-30!18;CL:0002420!1.14e-30!18;CL:0002419!1.14e-30!18;CL:0000790!1.14e-30!18;CL:0000084!9.15e-25!25;CL:0000827!9.15e-25!25;CL:0000624!3.35e-21!6;CL:0000625!5.61e-15!11;CL:0002087!1.07e-14!119;CL:0002031!1.40e-12!124;CL:0000738!1.57e-11!140;CL:0000898!2.05e-11!3;CL:0000236!1.02e-08!14;CL:0000945!2.50e-08!24;CL:0000826!2.50e-08!24;CL:0000037!3.12e-08!172;CL:0000566!3.12e-08!172;CL:0000815!5.10e-08!2;CL:0000792!5.10e-08!2;CL:0002677!5.10e-08!2;CL:0002032!5.72e-08!165;CL:0000837!5.72e-08!165;CL:0000785!1.03e-07!2;CL:0000955!1.03e-07!2;CL:0000818!1.03e-07!2;CL:0000954!1.03e-07!2;CL:0000816!1.03e-07!2;CL:0000988!1.89e-07!182 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.30e-09!4;UBERON:0005058!2.30e-09!4;UBERON:0009113!2.30e-09!4;UBERON:0003295!2.30e-09!4;UBERON:0005562!2.30e-09!4;UBERON:0004177!9.43e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.88e-50;2!UBERON:0005058;1.88e-50;2!UBERON:0009113;1.88e-50;2!UBERON:0004177;6.64e-21;5!UBERON:0005057;6.64e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.23e-26,4;UBERON:0005058,5.23e-26,4;UBERON:0009113,5.23e-26,4;UBERON:0003295,5.23e-26,4;UBERON:0005562,5.23e-26,4;UBERON:0003351,1.03e-17,6;UBERON:0004177,2.47e-15,7;UBERON:0005057,2.47e-15,7;UBERON:0000974,4.89e-11,10;UBERON:0003408,4.89e-11,10;UBERON:0001042,4.89e-11,10;UBERON:0009145,4.89e-11,10;UBERON:0006562,4.03e-10,11;UBERON:0009722,4.03e-10,11;UBERON:0007690,4.03e-10,11 | |||
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| ||
|short_description=p12@KCNA2 | |||
}} | }} |
Latest revision as of 01:23, 16 September 2015
Short description: | p12@KCNA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KCNA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000369770, NM_001204269, uc009wfv.1_5end |
EntrezGene: | KCNA2 |
HGNC: | 6220 |
UniProt: | Q86XG6A8K1Z6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.23e-26 | 4 |
hemolymphoid system gland | 5.23e-26 | 4 |
thymic region | 5.23e-26 | 4 |
pharyngeal gland | 5.23e-26 | 4 |
thymus primordium | 5.23e-26 | 4 |
pharyngeal epithelium | 1.03e-17 | 6 |
hemopoietic organ | 2.47e-15 | 7 |
immune organ | 2.47e-15 | 7 |
neck | 4.89e-11 | 10 |
gland of gut | 4.89e-11 | 10 |
chordate pharynx | 4.89e-11 | 10 |
pharyngeal region of foregut | 4.89e-11 | 10 |
pharynx | 4.03e-10 | 11 |
entire pharyngeal arch endoderm | 4.03e-10 | 11 |
early pharyngeal endoderm | 4.03e-10 | 11 |