FFCP PHASE1:Hg19::chr7:12443477..12443496,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:12443477..12443496,- to FFCP PHASE1:Hg19::chr7:12443477..12443496,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221806 | |EntrezGene=221806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21897 | |HGNC=21897 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N2E2 | |UniProt=Q8N2E2 | ||
|association_with_transcript=34bp_to_ENST00000275358,ENST00000541006_5end | |||
|cluster_id=chr7:12443477..12443496,- | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_2_at_VWDE_5end | |||
|id=chr7:12443477..12443496,- | |||
|ontology_enrichment_celltype=CL:0000066!8.42e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.14e-15;5!CL:0000123;3.65e-07;2!CL:0000242;3.65e-07;2!CL:0000039;6.28e-07;7!CL:0000586;6.28e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.99e-15,5;CL:0000242,3.29e-07,2;CL:0000039,5.63e-07,7;CL:0000586,5.63e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!8.33e-17!239;DOID:305!1.70e-16!106;DOID:162!2.21e-16!235;DOID:0050687!1.51e-13!143;DOID:0050686!1.56e-07!137;DOID:1036!6.21e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.94e-19;8!DOID:8692;5.05e-13;31!DOID:1240;8.98e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.51e-19,8;DOID:8692,1.68e-13,31;DOID:162,2.77e-12,235;DOID:1240,7.71e-12,39;DOID:14566,8.17e-12,239;DOID:0050686,2.43e-11,137;DOID:2531,1.07e-09,51;DOID:0060083,1.07e-09,51;DOID:305,7.94e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001950!6.41e-09!20;UBERON:0001869!4.54e-08!32;UBERON:0001893!9.09e-08!34;UBERON:0000956!9.15e-08!25;UBERON:0000203!9.15e-08!25;UBERON:0002619!1.23e-07!22;UBERON:0002780!1.33e-07!41;UBERON:0001890!1.33e-07!41;UBERON:0006240!1.33e-07!41;UBERON:0002791!2.81e-07!33;UBERON:0003080!3.09e-07!42;UBERON:0002020!6.40e-07!34;UBERON:0003528!6.40e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.34e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.43e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,2.93600439334847,0,0,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,1.58030450865046,0.590129310341499,0,0.616804496998528,0,0,0.473447805734733,0,0,0,0.221533894583621,0,0.25618263945135,0,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.472674085820339,0,0.263504357079378,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22065901260936,4.37348235460901,2.90484857173796,2.69518743039963,3.02785021050754,4.74470566798579,0,0,0,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.110293972732394,0.653638332277218,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0.100528972411631,0.370353780634118,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.40101294060657,0.828728900423067,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.438519753291869,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0.366277859273374,0.41254749960294,0,0,0,0,0.308097234229289,0.15350367472613,0,0.107420244868274,0,0,0.0890320356467374,0.661139661443912,0.192190067365106,1.91419068741876,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,3.43056302373444,0,0,0,0.797131363644112,0,0,0,0.649243880549111,1.12318871245384,0,0,0,0,0,0,1.27753871307098,0,0.307240764308458,0.671028323677248,0.500547425135725,0,0,1.23087398947712,10.8182271390393,0,1.4098700508785,0,0,0,2.34031106982705,0,0,0,0,0.994147647766298,0.281338832821026,0,3.79048910721547,0,0,0,1.76352923497993,0,0,0,0.359473404589307,0.537063524026827,0,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0.1137934482855,0.762760950878299,1.18193840883968,6.20538071834636,0.874813840149763,7.46587478213157,0,0.723578631752448,0,0.442317039724898,0,0.438770794307945,3.15921544205071,0.83654246567162,0.307801034015188,0,2.07507513949254,1.88491053260521,0.217294743844016,0,0,0,0,3.1396051279005,1.99454018280188,25.2667139891242,25.8802545299416,17.6212666324635,17.0778359451767,2.2251121057253,0,0.163232808159148,0.141353071433941,1.29833183845255,0,0.353830258013357,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0.586993856796269,0,0,1.20990716048664,0.30607276163049,0,0.901940516486955,0.72581733978073,0,0,0.313932918407225,0,0.569219092059585,0,0,0.0979923974143777,0.957651272384428,0.52418000472609,0,0.774050650312681,0.146178634172371,0.328461828212837,0.0969890164884194,0,0,0.274083849293502,0,0.569797163602908,1.17330829640882,2.00397050628834,0,0.599428828746391,0.144090417154106,0,1.88754497648161,0,0.99402028452346,0.235694034616795,0,0,0.101998217636322,0,0,0,6.38732940334862,0.859530882839914,0,1.95497680890578,0.229160424011684,0,0.199679000498991,0,0,1.34366944973453,0,0,0,0,0,0.196854963029498,0,0,0,4.1795818600905,4.95141971750042,7.89336642255452,1.5748172408605,0,0.425246896606173,0,0.157611414598396,0.419636705079985,0.422401346077626,0,0.575745591958336,0.714695326373367,0,1.27134268827375,0,0.864221491201268,0,0,13.2989883613929,0,0,0.293104467356165,0,0,0.13223260174269,0.171086837884329,2.11444506695002,0.213574825135389,0,0,0,0.592834895693833,0,1.27668251554036,0,0,0,0,0,0.886068179966986,0.610131324509816,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,2.81000943484129,5.07223600137888,0,0,0,0,0,0,0,0,0,0,0,0,0.465788870628778,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0.906823702049089,0.694567422971502,0.244736704506468,0.179088841081487,0,0.657852148736121,0,0,0,0,0,0.303859956177382,0.553033744606923,0,0,0,0,0,0.633936370075881,0,0.640150378164845,0,0,0.368211900503681,0,1.24415452006595,0,0,0,0.436838552768056,0,0.425149840203366,0,0,0,0,3.20228299314188,0,0,0.385375350578757,1.41696576325585,0.478901577171454,0.41023272848151,0,0.829887029570615,0.161475645631851,0,0,3.53909170043221,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,1.04762677792569,0.163771917510097,0,0.742913430802341,0.781078098613847,0.2066867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| ||
|short_description=p2@VWDE | |||
}} | }} |
Latest revision as of 01:10, 16 September 2015
Short description: | p2@VWDE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VWDE_5end |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | 34bp_to_ENST00000275358, ENST00000541006_5end |
EntrezGene: | VWDE |
HGNC: | 21897 |
UniProt: | Q8N2E2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.99e-15 | 5 |
Merkel cell | 3.29e-07 | 2 |
germ line cell | 5.63e-07 | 7 |
germ cell | 5.63e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.43e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.51e-19 | 8 |
myeloid leukemia | 1.68e-13 | 31 |
cancer | 2.77e-12 | 235 |
leukemia | 7.71e-12 | 39 |
disease of cellular proliferation | 8.17e-12 | 239 |
organ system cancer | 2.43e-11 | 137 |
hematologic cancer | 1.07e-09 | 51 |
immune system cancer | 1.07e-09 | 51 |
carcinoma | 7.94e-07 | 106 |