FFCP PHASE1:Hg19::chr2:102615532..102615543,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7850 | |EntrezGene=7850 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5994 | |HGNC=5994 | ||
|TSSclassifier=strong | |||
|UniProt=P27930 | |UniProt=P27930 | ||
|association_with_transcript=73bp_to_NM_173343,uc002tbn.2_5end | |association_with_transcript=73bp_to_NM_173343,uc002tbn.2_5end | ||
|cluster_id=chr2:102615532..102615543,+ | |||
|coexpression_cluster_id=C74 | |coexpression_cluster_id=C74 | ||
|description=CAGE_peak_4_at_IL1R2_5end | |description=CAGE_peak_4_at_IL1R2_5end | ||
|id=chr2:102615532..102615543,+ | |id=chr2:102615532..102615543,+ | ||
|ontology_enrichment_celltype=CL:0002541!1.16e-13!3;CL:0000838!1.02e-11!52;CL:0000542!1.94e-11!53;CL:0000051!1.94e-11!53;CL:0000451!4.84e-09!10;CL:0000815!8.03e-09!2;CL:0000792!8.03e-09!2;CL:0002677!8.03e-09!2;CL:0000453!4.76e-08!5;CL:0000990!2.09e-07!8;CL:0000945!4.30e-07!24;CL:0000826!4.30e-07!24;CL:0000084!6.43e-07!25;CL:0000827!6.43e-07!25 | |ontology_enrichment_celltype=CL:0002541!1.16e-13!3;CL:0000838!1.02e-11!52;CL:0000542!1.94e-11!53;CL:0000051!1.94e-11!53;CL:0000451!4.84e-09!10;CL:0000815!8.03e-09!2;CL:0000792!8.03e-09!2;CL:0002677!8.03e-09!2;CL:0000453!4.76e-08!5;CL:0000990!2.09e-07!8;CL:0000945!4.30e-07!24;CL:0000826!4.30e-07!24;CL:0000084!6.43e-07!25;CL:0000827!6.43e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.46e-47;3!CL:0000349;2.34e-13;19!CL:0000453;4.66e-13;5!CL:0000990;1.16e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.47e-47,3;CL:0000349,2.30e-13,19;CL:0000453,6.32e-13,5;CL:0000990,1.38e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.93e-16;1!UBERON:0004872;9.11e-10;7 | |||
|ontology_enrichment_disease=DOID:0060058!5.31e-07!10 | |ontology_enrichment_disease=DOID:0060058!5.31e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;7.93e-25;10!DOID:0060060;1.93e-16;1!DOID:0060061;1.93e-16;1!DOID:8691;1.93e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.40e-25,10;DOID:0060060,1.65e-16,1;DOID:0060061,1.65e-16,1;DOID:8691,1.65e-16,1;DOID:2531,1.50e-07,51;DOID:0060083,1.50e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.16e-13!3;UBERON:0000920!1.16e-13!3;UBERON:0003124!5.22e-10!7;UBERON:0000478!6.62e-10!24;UBERON:0005631!2.04e-07!14;UBERON:0000158!2.04e-07!14 | |ontology_enrichment_uberon=UBERON:0000476!1.16e-13!3;UBERON:0000920!1.16e-13!3;UBERON:0003124!5.22e-10!7;UBERON:0000478!6.62e-10!24;UBERON:0005631!2.04e-07!14;UBERON:0000158!2.04e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.46e-47;3!UBERON:0000920;6.46e-47;3!UBERON:0005631;4.84e-25;10!UBERON:0000158;4.84e-25;10!UBERON:0000478;4.46e-16;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.47e-47,3;UBERON:0003124,2.35e-35,7;UBERON:0005631,1.86e-27,14;UBERON:0000158,1.86e-27,14;UBERON:0000478,4.54e-16,24;UBERON:0004923,3.42e-08,66 | |||
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| ||
|short_description=p4@IL1R2 | |short_description=p4@IL1R2 | ||
}} | }} |
Latest revision as of 01:03, 16 September 2015
Short description: | p4@IL1R2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IL1R2_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 73bp_to_NM_173343, uc002tbn.2_5end |
EntrezGene: | IL1R2 |
HGNC: | 5994 |
UniProt: | P27930 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.47e-47 | 3 |
extraembryonic cell | 2.30e-13 | 19 |
Langerhans cell | 6.32e-13 | 5 |
conventional dendritic cell | 1.38e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.47e-47 | 3 |
chorion | 2.35e-35 | 7 |
extraembryonic membrane | 1.86e-27 | 14 |
membranous layer | 1.86e-27 | 14 |
extraembryonic structure | 4.54e-16 | 24 |
organ component layer | 3.42e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.40e-25 | 10 |
non-Hodgkin lymphoma | 1.65e-16 | 1 |
cutaneous T cell lymphoma | 1.65e-16 | 1 |
mycosis fungoides | 1.65e-16 | 1 |
hematologic cancer | 1.50e-07 | 51 |
immune system cancer | 1.50e-07 | 51 |