FFCP PHASE1:Hg19::chr11:118550346..118550364,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11181 | |EntrezGene=11181 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12266 | |HGNC=12266 | ||
|TSSclassifier=strong | |||
|UniProt=E7ENH4,E9PPK1 | |UniProt=E7ENH4,E9PPK1 | ||
|association_with_transcript=0bp_to_ENST00000450700,ENST00000530256,ENST00000531295_5end | |association_with_transcript=0bp_to_ENST00000450700,ENST00000530256,ENST00000531295_5end | ||
|cluster_id=chr11:118550346..118550364,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_TREH_5end | |description=CAGE_peak_1_at_TREH_5end | ||
|id=chr11:118550346..118550364,- | |id=chr11:118550346..118550364,- | ||
|ontology_enrichment_celltype=CL:0000181!3.42e-17!12;CL:0000417!3.42e-17!12;CL:0000668!3.42e-17!12;CL:0000414!3.42e-17!12;CL:0000412!3.42e-17!12;CL:0000182!3.42e-17!12;CL:0000223!3.84e-08!59 | |ontology_enrichment_celltype=CL:0000181!3.42e-17!12;CL:0000417!3.42e-17!12;CL:0000668!3.42e-17!12;CL:0000414!3.42e-17!12;CL:0000412!3.42e-17!12;CL:0000182!3.42e-17!12;CL:0000223!3.84e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.02e-15;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.59e-16,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.76e-13;1!UBERON:0007297;3.28e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!2.75e-17!23;UBERON:0009497!7.25e-16!25;UBERON:0000015!7.25e-16!25;UBERON:0002423!7.25e-16!25;UBERON:0006235!7.25e-16!25;UBERON:0004161!7.25e-16!25;UBERON:0004921!2.01e-15!129;UBERON:0004185!2.01e-15!129;UBERON:0009856!4.53e-15!26;UBERON:0008835!1.11e-14!22;UBERON:0003894!1.11e-14!22;UBERON:0001007!2.08e-14!155;UBERON:0001555!2.08e-14!155;UBERON:0007026!2.08e-14!155;UBERON:0002107!1.07e-13!19;UBERON:0006925!1.07e-13!19;UBERON:0008836!1.07e-13!19;UBERON:0007499!1.00e-12!25;UBERON:0004119!1.03e-12!169;UBERON:0000925!1.03e-12!169;UBERON:0006595!1.03e-12!169;UBERON:0005409!7.01e-11!35;UBERON:0002365!5.19e-10!31;UBERON:0002330!5.19e-10!31;UBERON:0005057!1.15e-09!26;UBERON:0000160!2.40e-09!27;UBERON:0005172!2.99e-09!55;UBERON:0005173!2.99e-09!55;UBERON:0003929!3.20e-09!54;UBERON:0002368!1.21e-08!35;UBERON:0001155!2.32e-08!9;UBERON:0007023!3.28e-08!115;UBERON:0002417!4.21e-08!61;UBERON:0000916!4.21e-08!61;UBERON:0000481!6.91e-08!347;UBERON:0001041!8.38e-08!98;UBERON:0000077!9.41e-08!130;UBERON:0000059!7.68e-07!11;UBERON:0002530!7.98e-07!59 | |ontology_enrichment_uberon=UBERON:0009854!2.75e-17!23;UBERON:0009497!7.25e-16!25;UBERON:0000015!7.25e-16!25;UBERON:0002423!7.25e-16!25;UBERON:0006235!7.25e-16!25;UBERON:0004161!7.25e-16!25;UBERON:0004921!2.01e-15!129;UBERON:0004185!2.01e-15!129;UBERON:0009856!4.53e-15!26;UBERON:0008835!1.11e-14!22;UBERON:0003894!1.11e-14!22;UBERON:0001007!2.08e-14!155;UBERON:0001555!2.08e-14!155;UBERON:0007026!2.08e-14!155;UBERON:0002107!1.07e-13!19;UBERON:0006925!1.07e-13!19;UBERON:0008836!1.07e-13!19;UBERON:0007499!1.00e-12!25;UBERON:0004119!1.03e-12!169;UBERON:0000925!1.03e-12!169;UBERON:0006595!1.03e-12!169;UBERON:0005409!7.01e-11!35;UBERON:0002365!5.19e-10!31;UBERON:0002330!5.19e-10!31;UBERON:0005057!1.15e-09!26;UBERON:0000160!2.40e-09!27;UBERON:0005172!2.99e-09!55;UBERON:0005173!2.99e-09!55;UBERON:0003929!3.20e-09!54;UBERON:0002368!1.21e-08!35;UBERON:0001155!2.32e-08!9;UBERON:0007023!3.28e-08!115;UBERON:0002417!4.21e-08!61;UBERON:0000916!4.21e-08!61;UBERON:0000481!6.91e-08!347;UBERON:0001041!8.38e-08!98;UBERON:0000077!9.41e-08!130;UBERON:0000059!7.68e-07!11;UBERON:0002530!7.98e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.69e-24;22!UBERON:0000160;2.63e-23;17!UBERON:0002108;2.68e-22;4!UBERON:0004921;7.31e-15;33!UBERON:0001301;3.76e-13;1!UBERON:0001155;3.04e-12;9!UBERON:0002423;1.39e-11;25!UBERON:0000059;4.03e-10;11!UBERON:0002107;5.03e-10;19!UBERON:0006925;5.03e-10;19!UBERON:0001007;3.27e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.63e-23,17;UBERON:0002108,2.68e-22,4;UBERON:0005409,1.32e-21,25;UBERON:0001301,3.33e-13,1;UBERON:0001155,3.04e-12,9;UBERON:0009497,1.35e-11,25;UBERON:0000015,1.35e-11,25;UBERON:0002423,1.35e-11,25;UBERON:0006235,1.35e-11,25;UBERON:0004161,1.35e-11,25;UBERON:0004921,1.81e-10,118;UBERON:0000059,4.03e-10,11;UBERON:0002107,4.85e-10,19;UBERON:0006925,4.85e-10,19;UBERON:0008836,4.85e-10,19;UBERON:0005172,5.48e-10,54;UBERON:0005173,5.48e-10,54;UBERON:0001007,5.88e-10,145;UBERON:0001555,5.88e-10,145;UBERON:0007026,5.88e-10,145;UBERON:0002417,6.32e-09,60;UBERON:0000916,6.32e-09,60;UBERON:0004119,7.13e-09,160;UBERON:0000925,7.13e-09,160;UBERON:0006595,7.13e-09,160;UBERON:0008835,1.06e-08,22;UBERON:0003894,1.06e-08,22;UBERON:0009854,2.49e-08,23;UBERON:0007499,1.12e-07,25;UBERON:0009856,2.17e-07,26 | |||
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| ||
|short_description=p1@TREH | |short_description=p1@TREH | ||
}} | }} |
Latest revision as of 01:02, 16 September 2015
Short description: | p1@TREH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TREH_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000450700, ENST00000530256, ENST00000531295_5end |
EntrezGene: | TREH |
HGNC: | 12266 |
UniProt: | E7ENH4E9PPK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.59e-16 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.63e-23 | 17 |
small intestine | 2.68e-22 | 4 |
gastrointestinal system | 1.32e-21 | 25 |
epididymis | 3.33e-13 | 1 |
colon | 3.04e-12 | 9 |
epithelium of foregut-midgut junction | 1.35e-11 | 25 |
anatomical boundary | 1.35e-11 | 25 |
hepatobiliary system | 1.35e-11 | 25 |
foregut-midgut junction | 1.35e-11 | 25 |
septum transversum | 1.35e-11 | 25 |
subdivision of digestive tract | 1.81e-10 | 118 |
large intestine | 4.03e-10 | 11 |
liver | 4.85e-10 | 19 |
digestive gland | 4.85e-10 | 19 |
liver bud | 4.85e-10 | 19 |
abdomen element | 5.48e-10 | 54 |
abdominal segment element | 5.48e-10 | 54 |
digestive system | 5.88e-10 | 145 |
digestive tract | 5.88e-10 | 145 |
primitive gut | 5.88e-10 | 145 |
abdominal segment of trunk | 6.32e-09 | 60 |
abdomen | 6.32e-09 | 60 |
endoderm-derived structure | 7.13e-09 | 160 |
endoderm | 7.13e-09 | 160 |
presumptive endoderm | 7.13e-09 | 160 |
hepatic diverticulum | 1.06e-08 | 22 |
liver primordium | 1.06e-08 | 22 |
digestive tract diverticulum | 2.49e-08 | 23 |
epithelial sac | 1.12e-07 | 25 |
sac | 2.17e-07 | 26 |