FFCP PHASE1:Hg19::chr3:150920950..150920962,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29909 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30057 | |||
|TSSclassifier=strong | |||
|UniProt=O14626 | |||
|association_with_transcript=16bp_to_ENST00000309180_5end | |||
|cluster_id=chr3:150920950..150920962,- | |||
|coexpression_cluster_id=C239 | |||
|description=CAGE_peak_2_at_GPR171_5end | |||
|id=chr3:150920950..150920962,- | |||
|ontology_enrichment_celltype=CL:0000738!1.23e-29!140;CL:0000084!4.07e-25!25;CL:0000827!4.07e-25!25;CL:0000037!5.37e-25!172;CL:0000566!5.37e-25!172;CL:0002087!8.60e-24!119;CL:0000791!1.65e-23!18;CL:0000789!1.65e-23!18;CL:0002420!1.65e-23!18;CL:0002419!1.65e-23!18;CL:0000790!1.65e-23!18;CL:0002032!4.81e-23!165;CL:0000837!4.81e-23!165;CL:0000988!5.07e-23!182;CL:0002031!6.19e-23!124;CL:0000838!2.63e-17!52;CL:0000542!8.82e-17!53;CL:0000051!8.82e-17!53;CL:0000625!1.92e-15!11;CL:0000763!9.10e-09!112;CL:0000049!9.10e-09!112;CL:0000990!1.39e-08!8;CL:0000624!2.01e-08!6;CL:0000451!2.41e-08!10;CL:0000766!3.95e-08!76;CL:0002009!4.52e-08!65;CL:0002057!4.75e-08!42;CL:0000557!5.04e-08!71;CL:0000453!6.86e-08!5;CL:0000860!3.91e-07!45;CL:0002194!7.95e-07!63;CL:0000576!7.95e-07!63;CL:0000040!7.95e-07!63;CL:0000559!7.95e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.49e-37;18!CL:0000789;7.49e-37;18!CL:0002419;7.49e-37;18!CL:0000084;2.74e-32;25!CL:0000625;1.93e-26;11!CL:0000453;7.26e-13;5!CL:0000624;4.10e-10;6!CL:0000542;3.26e-09;53!CL:0000226;1.73e-07;3!CL:0000842;1.73e-07;3!CL:0000623;2.65e-07;3!CL:0000990;6.24e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.95e-37,18;CL:0000789,8.95e-37,18;CL:0002420,8.95e-37,18;CL:0002419,8.95e-37,18;CL:0000790,8.95e-37,18;CL:0000084,3.15e-32,25;CL:0000827,3.15e-32,25;CL:0000625,2.29e-26,11;CL:0000838,2.22e-17,52;CL:0000542,6.18e-17,53;CL:0000051,6.18e-17,53;CL:0000738,4.84e-15,136;CL:0000453,7.28e-13,5;CL:0000037,5.34e-12,168;CL:0002087,1.94e-11,115;CL:0000988,6.96e-11,177;CL:0002032,2.05e-10,161;CL:0000837,2.05e-10,161;CL:0000624,4.15e-10,6;CL:0002031,6.87e-10,120;CL:0000226,1.38e-07,3;CL:0000842,1.38e-07,3;CL:0000623,2.45e-07,3;CL:0000825,2.45e-07,3;CL:0000990,6.24e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;7.49e-37;18!CL:0000051;3.26e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.74e-18!102;UBERON:0003061!8.74e-18!102;UBERON:0002193!1.04e-16!112;UBERON:0000178!8.81e-13!15;UBERON:0000179!8.81e-13!15;UBERON:0000463!8.81e-13!15;UBERON:0007023!9.65e-12!115;UBERON:0004177!4.01e-09!7;UBERON:0002405!2.65e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.57e-19;15!UBERON:0000179;1.57e-19;15!UBERON:0000463;1.57e-19;15!UBERON:0002390;3.63e-13;32!UBERON:0002193;4.10e-08;42!UBERON:0004177;1.56e-07;5!UBERON:0005057;1.56e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.02e-19,15;UBERON:0000179,1.02e-19,15;UBERON:0000463,1.02e-19,15;UBERON:0004177,1.01e-11,7;UBERON:0005057,1.01e-11,7;UBERON:0002370,3.37e-10,4;UBERON:0005058,3.37e-10,4;UBERON:0009113,3.37e-10,4;UBERON:0003295,3.37e-10,4;UBERON:0005562,3.37e-10,4;UBERON:0002390,9.00e-09,98;UBERON:0003061,9.00e-09,98;UBERON:0002193,2.96e-08,108;UBERON:0003351,8.94e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.314843125254717,0.393364276848904,1.53531759238885,0.464448369948228,0,0,0,0,0,0,0,0.401088894940283,0,0,1.94336199611388,1.03030227053675,0,0.377875943688809,0.485168122375632,0.464858073811369,0.411167888021826,0,0.28769239232215,0.768482119587302,0.236482229888585,1.03423704220986,0,0,0,0.272906150057846,0,0.612167784741805,1.92557416245656,0,0.329851300186716,0.398927315243264,0,0.290209238628584,1.13477044938228,0.622822248995575,0.75374599577023,0.521482918420201,0.217188844705117,0.605399502633369,2.20966581592539,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0.263384084775077,5.11445402295966,3.14408610199332,3.90642848099067,11.8702411727381,0.977766799900771,3.31413464014313,1.94826728407911,64.3952440796303,9.72199494666963,9.96902525626295,10.2905468230706,17.6766021221432,21.5898516949398,28.1188816872286,25.7005516540839,31.2987332593857,6.82118190545478,5.35081656179426,10.4535523804977,31.3866879272258,5.74830740402882,7.90343124610049,17.4583587493457,15.2911398875566,9.11516835398986,9.50452044448374,6.17357988218868,6.39933055772092,16.240994451805,17.7582939033013,17.243687935342,5.24177532384304,6.68600489458768,3.62061009706997,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0.522389211897802,0.26591592103773,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.414656231081544,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.6305560875016,2.56139988262505,1.72502059887614,3.33691894327346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.6165768359324,2.5885704098234,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,2.53723804616085,5.35246044999663,1.70894156152249,4.52640373369799,4.11362273086194,1.94541993357815,3.7802200606668,4.75875105776562,0,0,0,0,0,0,0.478278818186467,0.399158742865633,1.1490322207942,0,0,0.280797178113459,0,0,0,0.338583555603207,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0.597743964753209,3.03912307084262,0,0,0.369254416383208,0,0,0,0,1.08507746200627,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,1.06606955203727,0,16.7968874342676,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.14994833854341,0.611030144933625,0,0.123563938946503,0,0,0,0,0,0,0,0,3.62972148145992,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1340871765797,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,19.5727285649805,6.96421759102155,0,0,0.788057072991982,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,2.34932307648928,1.72924735609633,2.07119527673598,7.93865634899121,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,3.50748555910899,11.8249707878893,7.85113892428052,0,0,0,30.1980967740944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,1.79024599904647,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.345701962667338,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45178432815584,0,0,2.46957305945423,0.437119121007915,0,0,0,0.392616934229891,0.297046400327086,0,0,3.38342104727473,1.03132620757723,0.399764623699716,0,0,0,0,0,0,0,0,0,4.7612415646386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0661699095049,0.476128862927481,3.93992349999637,3.97278171493491,0,0.0636471582781649,0.404234377916439,0.870866991587845,0,0.740872583160463,1.72133292942423,0.332660356546013,0,0,0,0,0,0,0,0,1.20764276154616,0 | |||
|short_description=p2@GPR171 | |||
}} |
Latest revision as of 00:37, 16 September 2015
Short description: | p2@GPR171 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPR171_5end |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | 16bp_to_ENST00000309180_5end |
EntrezGene: | GPR171 |
HGNC: | 30057 |
UniProt: | O14626 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.95e-37 | 18 |
alpha-beta T cell | 8.95e-37 | 18 |
immature T cell | 8.95e-37 | 18 |
mature T cell | 8.95e-37 | 18 |
immature alpha-beta T cell | 8.95e-37 | 18 |
T cell | 3.15e-32 | 25 |
pro-T cell | 3.15e-32 | 25 |
CD8-positive, alpha-beta T cell | 2.29e-26 | 11 |
lymphoid lineage restricted progenitor cell | 2.22e-17 | 52 |
lymphocyte | 6.18e-17 | 53 |
common lymphoid progenitor | 6.18e-17 | 53 |
leukocyte | 4.84e-15 | 136 |
Langerhans cell | 7.28e-13 | 5 |
hematopoietic stem cell | 5.34e-12 | 168 |
nongranular leukocyte | 1.94e-11 | 115 |
hematopoietic cell | 6.96e-11 | 177 |
hematopoietic oligopotent progenitor cell | 2.05e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-10 | 161 |
CD4-positive, alpha-beta T cell | 4.15e-10 | 6 |
hematopoietic lineage restricted progenitor cell | 6.87e-10 | 120 |
single nucleate cell | 1.38e-07 | 3 |
mononuclear cell | 1.38e-07 | 3 |
natural killer cell | 2.45e-07 | 3 |
pro-NK cell | 2.45e-07 | 3 |
conventional dendritic cell | 6.24e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 1.02e-19 | 15 |
haemolymphatic fluid | 1.02e-19 | 15 |
organism substance | 1.02e-19 | 15 |
hemopoietic organ | 1.01e-11 | 7 |
immune organ | 1.01e-11 | 7 |
thymus | 3.37e-10 | 4 |
hemolymphoid system gland | 3.37e-10 | 4 |
thymic region | 3.37e-10 | 4 |
pharyngeal gland | 3.37e-10 | 4 |
thymus primordium | 3.37e-10 | 4 |
hematopoietic system | 9.00e-09 | 98 |
blood island | 9.00e-09 | 98 |
hemolymphoid system | 2.96e-08 | 108 |
pharyngeal epithelium | 8.94e-07 | 6 |