FFCP PHASE1:Hg19::chr1:110546475..110546482,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10768 | |EntrezGene=10768 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=344 | |HGNC=344 | ||
|TSSclassifier=strong | |||
|UniProt=B4E168,O43865 | |UniProt=B4E168,O43865 | ||
|association_with_transcript=-87bp_to_NM_001242675,NM_001242676_5end | |association_with_transcript=-87bp_to_NM_001242675,NM_001242676_5end | ||
|cluster_id=chr1:110546475..110546482,+ | |||
|coexpression_cluster_id=C1461 | |||
|description=CAGE_peak_27_at_AHCYL1_5end | |description=CAGE_peak_27_at_AHCYL1_5end | ||
|id=chr1:110546475..110546482,+ | |id=chr1:110546475..110546482,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.65e-08!7;CL:0000586!1.65e-08!7 | |ontology_enrichment_celltype=CL:0000039!1.65e-08!7;CL:0000586!1.65e-08!7 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!9.97e-07!22;DOID:2994!9.97e-07!22 | |ontology_enrichment_disease=DOID:3095!9.97e-07!22;DOID:2994!9.97e-07!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p27@AHCYL1 | |short_description=p27@AHCYL1 | ||
}} | }} |
Latest revision as of 23:35, 15 September 2015
Short description: | p27@AHCYL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_AHCYL1_5end |
Coexpression cluster: | C1461_medulla_locus_globus_spinal_mesothelioma_kidney_testicular |
Association with transcript: | -87bp_to_NM_001242675, NM_001242676_5end |
EntrezGene: | AHCYL1 |
HGNC: | 344 |
UniProt: | B4E168O43865 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
globus pallidus | 4.52e-50 | 2 |
pallidum | 4.52e-50 | 2 |
medulla oblongata | 4.27e-34 | 3 |
myelencephalon | 4.27e-34 | 3 |
future myelencephalon | 4.27e-34 | 3 |
brainstem | 7.67e-18 | 6 |
telencephalic nucleus | 1.91e-15 | 7 |
basal ganglion | 2.45e-12 | 9 |
neural nucleus | 2.45e-12 | 9 |
nuclear complex of neuraxis | 2.45e-12 | 9 |
nucleus of brain | 2.45e-12 | 9 |
aggregate regional part of brain | 2.45e-12 | 9 |
collection of basal ganglia | 2.45e-12 | 9 |
cerebral subcortex | 2.45e-12 | 9 |
segmental subdivision of hindbrain | 1.22e-09 | 12 |
hindbrain | 1.22e-09 | 12 |
presumptive hindbrain | 1.22e-09 | 12 |
segmental subdivision of nervous system | 5.28e-09 | 13 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
posterior neural tube | 5.55e-08 | 15 |
chordal neural plate | 5.55e-08 | 15 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |