FFCP PHASE1:Hg19::chr11:118047376..118047387,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6327 | |EntrezGene=6327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10589 | |HGNC=10589 | ||
|TSSclassifier=strong | |||
|UniProt=O60939 | |UniProt=O60939 | ||
|association_with_transcript=0bp_to_ENST00000278947_5end | |association_with_transcript=0bp_to_ENST00000278947_5end | ||
|cluster_id=chr11:118047376..118047387,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_SCN2B_5end | |description=CAGE_peak_2_at_SCN2B_5end | ||
|id=chr11:118047376..118047387,- | |id=chr11:118047376..118047387,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.14e-19;82!UBERON:0006215;4.94e-15;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.53e-95!57;UBERON:0005068!3.53e-95!57;UBERON:0006241!3.53e-95!57;UBERON:0007135!3.53e-95!57;UBERON:0001017!8.17e-90!82;UBERON:0005743!4.09e-88!86;UBERON:0000073!2.72e-84!94;UBERON:0001016!2.72e-84!94;UBERON:0002616!9.38e-80!59;UBERON:0000955!1.08e-75!69;UBERON:0006238!1.08e-75!69;UBERON:0002780!2.52e-74!41;UBERON:0001890!2.52e-74!41;UBERON:0006240!2.52e-74!41;UBERON:0003080!2.41e-72!42;UBERON:0002020!3.39e-67!34;UBERON:0003528!3.39e-67!34;UBERON:0003075!3.72e-67!86;UBERON:0007284!3.72e-67!86;UBERON:0001893!5.94e-67!34;UBERON:0007023!4.40e-66!115;UBERON:0002791!1.59e-64!33;UBERON:0002346!1.40e-63!90;UBERON:0001869!8.86e-63!32;UBERON:0002619!3.36e-53!22;UBERON:0003056!1.55e-49!61;UBERON:0001950!2.78e-48!20;UBERON:0000956!2.80e-46!25;UBERON:0000203!2.80e-46!25;UBERON:0004121!8.07e-46!169;UBERON:0000153!8.95e-46!129;UBERON:0007811!8.95e-46!129;UBERON:0000033!8.71e-45!123;UBERON:0000924!2.05e-44!173;UBERON:0006601!2.05e-44!173;UBERON:0000025!2.26e-23!194;UBERON:0003076!1.20e-22!15;UBERON:0003057!1.20e-22!15;UBERON:0002420!2.49e-22!9;UBERON:0007245!2.49e-22!9;UBERON:0010009!2.49e-22!9;UBERON:0010011!2.49e-22!9;UBERON:0000454!2.49e-22!9;UBERON:0002308!3.74e-22!9;UBERON:0000125!3.74e-22!9;UBERON:0004111!5.96e-19!241;UBERON:0009663!1.69e-17!7;UBERON:0000200!4.28e-17!6;UBERON:0001871!1.68e-16!7;UBERON:0004733!2.38e-16!12;UBERON:0002028!2.38e-16!12;UBERON:0007277!2.38e-16!12;UBERON:0002298!4.81e-15!8;UBERON:0004732!6.04e-15!13;UBERON:0000477!1.07e-14!286;UBERON:0001872!7.87e-14!5;UBERON:0000349!8.30e-14!5;UBERON:0002021!9.97e-14!5;UBERON:0000483!1.55e-12!309;UBERON:0000475!2.22e-12!365;UBERON:0000119!2.77e-12!312;UBERON:0000064!8.35e-12!219;UBERON:0000369!3.53e-11!4;UBERON:0002435!3.53e-11!4;UBERON:0000204!3.53e-11!4;UBERON:0010082!3.53e-11!4;UBERON:0002680!3.34e-10!9;UBERON:0001895!3.34e-10!9;UBERON:0010092!3.34e-10!9;UBERON:0002771!1.31e-09!3;UBERON:0001894!4.69e-09!7;UBERON:0006222!4.69e-09!7;UBERON:0005383!1.01e-08!3;UBERON:0005382!1.01e-08!3;UBERON:0000988!1.12e-08!3;UBERON:0000062!1.36e-08!511;UBERON:0001896!1.97e-08!3;UBERON:0005290!1.97e-08!3;UBERON:0010096!1.97e-08!3;UBERON:0002240!2.68e-08!3;UBERON:0006331!2.75e-08!3;UBERON:0000922!5.97e-08!612;UBERON:0000468!9.17e-08!659;UBERON:0000481!3.02e-07!347;UBERON:0002050!3.94e-07!605;UBERON:0005423!3.94e-07!605;UBERON:0000467!7.11e-07!625;UBERON:0000480!7.78e-07!626;UBERON:0001870!9.26e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.68e-68;22!UBERON:0001869;7.69e-67;32!UBERON:0003528;4.33e-66;34!UBERON:0002020;4.33e-66;34!UBERON:0002791;9.50e-62;32!UBERON:0001893;5.02e-61;34!UBERON:0000956;1.93e-59;25!UBERON:0000203;1.93e-59;25!UBERON:0001950;6.17e-59;20!UBERON:0002780;3.00e-51;41!UBERON:0001890;3.00e-51;41!UBERON:0000073;1.63e-50;53!UBERON:0002616;1.63e-50;53!UBERON:0000955;4.60e-41;68!UBERON:0001017;5.52e-37;75!UBERON:0000200;1.36e-30;6!UBERON:0001016;1.83e-25;83!UBERON:0004733;3.95e-24;12!UBERON:0002028;3.95e-24;12!UBERON:0004732;3.48e-22;13!UBERON:0002298;1.48e-19;6!UBERON:0000125;4.30e-19;9!UBERON:0002308;4.30e-19;9!UBERON:0002680;1.07e-18;9!UBERON:0001895;1.07e-18;9!UBERON:0002021;1.29e-16;5!UBERON:0001872;1.95e-16;5!UBERON:0000349;2.96e-16;5!UBERON:0007023;3.31e-16;114!UBERON:0001870;4.23e-16;3!UBERON:0000988;4.94e-15;3!UBERON:0002420;9.69e-14;9!UBERON:0007245;9.69e-14;9!UBERON:0010009;9.69e-14;9!UBERON:0010011;9.69e-14;9!UBERON:0000454;9.69e-14;9!UBERON:0001871;2.55e-12;6!UBERON:0011216;5.87e-12;132!UBERON:0000369;1.07e-11;4!UBERON:0002435;1.07e-11;4!UBERON:0000204;1.07e-11;4!UBERON:0002771;1.23e-11;2!UBERON:0009663;1.61e-11;7!UBERON:0002702;1.81e-11;2!UBERON:0001954;8.64e-11;2!UBERON:0003022;8.64e-11;2!UBERON:0002421;8.64e-11;2!UBERON:0002600;8.64e-11;2!UBERON:0002148;1.31e-10;2!UBERON:0006331;1.31e-10;2!UBERON:0009662;1.31e-10;2!UBERON:0002037;9.30e-08;6!UBERON:0010314;1.15e-07;132!UBERON:0005383;1.81e-07;3!UBERON:0005382;1.81e-07;3!UBERON:0001896;4.31e-07;3!UBERON:0005290;4.31e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.89e-99,56;UBERON:0005068,2.89e-99,56;UBERON:0006241,2.89e-99,56;UBERON:0007135,2.89e-99,56;UBERON:0000073,5.90e-99,53;UBERON:0002616,5.90e-99,53;UBERON:0000955,1.64e-89,68;UBERON:0006238,1.64e-89,68;UBERON:0001017,2.06e-83,81;UBERON:0003528,1.04e-77,34;UBERON:0002020,1.04e-77,34;UBERON:0001869,5.03e-76,32;UBERON:0002780,6.23e-75,41;UBERON:0001890,6.23e-75,41;UBERON:0003080,6.23e-75,41;UBERON:0006240,6.23e-75,41;UBERON:0001016,1.49e-74,89;UBERON:0001893,2.23e-71,34;UBERON:0002791,1.62e-69,32;UBERON:0002619,5.83e-68,22;UBERON:0003075,5.29e-66,82;UBERON:0007284,5.29e-66,82;UBERON:0002346,1.20e-62,86;UBERON:0000956,1.23e-59,25;UBERON:0000203,1.23e-59,25;UBERON:0001950,3.62e-59,20;UBERON:0007023,1.37e-55,114;UBERON:0010371,1.04e-50,104;UBERON:0003056,7.16e-49,61;UBERON:0010314,3.13e-41,132;UBERON:0004121,5.26e-36,171;UBERON:0000924,5.26e-36,171;UBERON:0006601,5.26e-36,171;UBERON:0000200,1.43e-30,6;UBERON:0011216,1.18e-27,223;UBERON:0000025,2.36e-24,192;UBERON:0003076,4.59e-24,15;UBERON:0003057,4.59e-24,15;UBERON:0004733,5.60e-24,12;UBERON:0002028,5.60e-24,12;UBERON:0007277,5.60e-24,12;UBERON:0004732,4.80e-22,13;UBERON:0002298,1.84e-19,6;UBERON:0000125,4.98e-19,9;UBERON:0002308,4.98e-19,9;UBERON:0002680,1.73e-18,9;UBERON:0001895,1.73e-18,9;UBERON:0010092,1.73e-18,9;UBERON:0004111,4.50e-18,240;UBERON:0002021,1.26e-16,5;UBERON:0001872,1.67e-16,5;UBERON:0000349,2.91e-16,5;UBERON:0001870,3.46e-16,3;UBERON:0000988,7.85e-15,3;UBERON:0002420,8.37e-14,9;UBERON:0007245,8.37e-14,9;UBERON:0010009,8.37e-14,9;UBERON:0010011,8.37e-14,9;UBERON:0000454,8.37e-14,9;UBERON:0000483,1.24e-12,306;UBERON:0000119,1.93e-12,309;UBERON:0001871,2.24e-12,6;UBERON:0000369,9.91e-12,4;UBERON:0002435,9.91e-12,4;UBERON:0000204,9.91e-12,4;UBERON:0010082,9.91e-12,4;UBERON:0002771,1.20e-11,2;UBERON:0009663,1.52e-11,7;UBERON:0002702,1.63e-11,2;UBERON:0001954,9.09e-11,2;UBERON:0003022,9.09e-11,2;UBERON:0002421,9.09e-11,2;UBERON:0002600,9.09e-11,2;UBERON:0002148,1.81e-10,2;UBERON:0006331,1.81e-10,2;UBERON:0009662,1.81e-10,2;UBERON:0002037,1.06e-07,6;UBERON:0006215,1.06e-07,6;UBERON:0005383,1.59e-07,3;UBERON:0005382,1.59e-07,3;UBERON:0001896,3.80e-07,3;UBERON:0005290,3.80e-07,3;UBERON:0010096,3.80e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,4.92342957436795,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,2.90799823828566,4.17456441728331,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,2.53252521113357,1.52581736317083,3.53853631779919,2.06883333267483,3.94893714877151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,2.34264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,3.67202616544096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,0.273810757783986,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,3.18091875923721,2.72406812223151,0,0,0,0,0,3.64497339948148,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,3.10279095267721,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,13.4228891392159,4.75725536684699,1.72022758707021,0.887432412294818,1.92498849118289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56252839300712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.327628914576042,0,0,0,0,0,0,0,0,0,3.40414893011235,2.8339315265117,4.31011419454308,4.30744364905586,0.252071696221718,4.6335359151026,5.97459888837849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36381546164381,2.34323429584154,4.96048311602842,3.80494861163441,0.546974809018219,0,0,0,0,0,1.00885116665647,0.606965604236632,0,0,0,0,2.24300118823545,4.20945750802234,0,0,0,3.77077415798405,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.437119121007915,0,0,0,3.14093547383912,0.891139200981258,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0.286679166302903,0,5.98325113680049,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,1.65833887891756,0.930896962757057,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0.488965776731466,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,4.92342957436795,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,2.90799823828566,4.17456441728331,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,2.53252521113357,1.52581736317083,3.53853631779919,2.06883333267483,3.94893714877151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,2.34264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,3.67202616544096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,0.273810757783986,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,3.18091875923721,2.72406812223151,0,0,0,0,0,3.64497339948148,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,3.10279095267721,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,13.4228891392159,4.75725536684699,1.72022758707021,0.887432412294818,1.92498849118289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56252839300712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.327628914576042,0,0,0,0,0,0,0,0,0,3.40414893011235,2.8339315265117,4.31011419454308,4.30744364905586,0.252071696221718,4.6335359151026,5.97459888837849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36381546164381,2.34323429584154,4.96048311602842,3.80494861163441,0.546974809018219,0,0,0,0,0,1.00885116665647,0.606965604236632,0,0,0,0,2.24300118823545,4.20945750802234,0,0,0,3.77077415798405,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.437119121007915,0,0,0,3.14093547383912,0.891139200981258,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0.286679166302903,0,5.98325113680049,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,1.65833887891756,0.930896962757057,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0.488965776731466,0.406896178315738,0,0,0 | ||
|short_description=p2@SCN2B | |short_description=p2@SCN2B | ||
}} | }} |
Latest revision as of 23:18, 15 September 2015
Short description: | p2@SCN2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCN2B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000278947_5end |
EntrezGene: | SCN2B |
HGNC: | 10589 |
UniProt: | O60939 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data