FFCP PHASE1:Hg19::chrX:51636712..51636759,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9500 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6813 | |||
|TSSclassifier=strong | |||
|UniProt=B4DQ04 | |||
|association_with_transcript=0bp_to_ENST00000375695,ENST00000430189,ENST00000470461,ENST00000485420,ENST00000486579,ENST00000494718_5end | |||
|cluster_id=chrX:51636712..51636759,+ | |||
|coexpression_cluster_id=C750 | |||
|description=CAGE_peak_1_at_MAGED1_5end | |||
|id=chrX:51636712..51636759,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.43e-42!180;CL:0000183!4.14e-22!59;CL:0000222!4.45e-22!119;CL:0000680!5.02e-21!57;CL:0000056!5.02e-21!57;CL:0000355!5.02e-21!57;CL:0000057!2.10e-20!75;CL:0000187!3.98e-20!54;CL:0000393!5.08e-18!60;CL:0000211!5.08e-18!60;CL:0000192!1.07e-17!42;CL:0000514!1.07e-17!42;CL:0002321!2.47e-16!248;CL:0000220!2.72e-16!246;CL:0000359!1.30e-13!32;CL:0002620!6.99e-08!23;CL:0000144!1.51e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.25e-13;32!CL:0000192;1.09e-12;43!CL:0000187;2.06e-11;55!CL:0000393;2.37e-09;61!CL:0000211;2.37e-09;61!CL:0000134;1.70e-08;55!CL:0000057;1.78e-08;73!CL:0000723;5.93e-08;61!CL:0002620;6.89e-08;23!CL:0000048;8.32e-08;58!CL:0002320;2.46e-07;188!CL:0000349;3.36e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.79e-22,121;CL:0000680,6.59e-21,58;CL:0000056,6.59e-21,58;CL:0000355,6.59e-21,58;CL:0000057,8.84e-21,76;CL:0000187,5.27e-20,55;CL:0000393,6.06e-18,61;CL:0000211,6.06e-18,61;CL:0000192,1.53e-17,43;CL:0000514,1.53e-17,43;CL:0002321,1.53e-16,250;CL:0000359,1.27e-13,32;CL:0002620,6.91e-08,23;CL:0000349,3.36e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;1.09e-12;43!CL:0000355;3.26e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.22e-23!365;UBERON:0000914!4.12e-23!83;UBERON:0002329!4.12e-23!83;UBERON:0003077!4.12e-23!83;UBERON:0003059!4.12e-23!83;UBERON:0007282!4.12e-23!83;UBERON:0009618!4.12e-23!83;UBERON:0007285!4.12e-23!83;UBERON:0005256!4.86e-22!143;UBERON:0004290!4.10e-21!70;UBERON:0000119!8.92e-21!312;UBERON:0000483!6.54e-20!309;UBERON:0001134!1.18e-19!61;UBERON:0002036!1.18e-19!61;UBERON:0003082!1.18e-19!61;UBERON:0000486!1.13e-18!82;UBERON:0002385!2.28e-18!63;UBERON:0001015!2.28e-18!63;UBERON:0000383!2.28e-18!63;UBERON:0000490!1.60e-17!138;UBERON:0002049!3.62e-17!79;UBERON:0007798!3.62e-17!79;UBERON:0002100!1.30e-16!216;UBERON:0004872!6.99e-15!84;UBERON:0003914!1.48e-14!118;UBERON:0001637!1.77e-13!42;UBERON:0003509!1.77e-13!42;UBERON:0004572!1.77e-13!42;UBERON:0000481!2.85e-13!347;UBERON:0001981!9.21e-13!60;UBERON:0007500!9.21e-13!60;UBERON:0004537!9.21e-13!60;UBERON:0006965!9.21e-13!60;UBERON:0000055!1.15e-12!69;UBERON:0004573!3.76e-11!33;UBERON:0004571!3.76e-11!33;UBERON:0004535!4.64e-11!110;UBERON:0000025!8.02e-11!194;UBERON:0000468!1.17e-10!659;UBERON:0004111!1.29e-10!241;UBERON:0001009!2.27e-10!113;UBERON:0000477!2.75e-10!286;UBERON:0003104!1.48e-08!238;UBERON:0009142!1.48e-08!238;UBERON:0002199!6.74e-07!45;UBERON:0002416!6.74e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.37e-10;33!UBERON:0004571;4.37e-10;33!UBERON:0001637;8.87e-10;42!UBERON:0003509;8.87e-10;42!UBERON:0004572;8.87e-10;42!UBERON:0007500;5.94e-08;56!UBERON:0001981;5.94e-08;56!UBERON:0004537;5.94e-08;56!UBERON:0002049;1.49e-07;75!UBERON:0007798;1.49e-07;75!UBERON:0002384;7.15e-07;198!UBERON:0000055;7.89e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.18e-22,78;UBERON:0007524,2.26e-21,73;UBERON:0000119,3.82e-21,309;UBERON:0003104,4.81e-21,160;UBERON:0009142,4.81e-21,160;UBERON:0002329,4.85e-21,71;UBERON:0003059,4.85e-21,71;UBERON:0007282,4.85e-21,71;UBERON:0004290,4.85e-21,71;UBERON:0009618,4.85e-21,71;UBERON:0003077,7.25e-21,72;UBERON:0007285,7.25e-21,72;UBERON:0005256,9.04e-21,122;UBERON:0000483,2.85e-20,306;UBERON:0001134,1.44e-19,62;UBERON:0002036,1.44e-19,62;UBERON:0003082,1.44e-19,62;UBERON:0000490,2.68e-19,148;UBERON:0000486,1.21e-18,83;UBERON:0002385,2.68e-18,64;UBERON:0001015,2.68e-18,64;UBERON:0000383,2.68e-18,64;UBERON:0002049,7.78e-17,78;UBERON:0007798,7.78e-17,78;UBERON:0004872,1.45e-14,83;UBERON:0003914,1.49e-14,117;UBERON:0002100,3.91e-14,199;UBERON:0001637,1.73e-13,42;UBERON:0003509,1.73e-13,42;UBERON:0004572,1.73e-13,42;UBERON:0007500,1.93e-12,59;UBERON:0001981,1.93e-12,59;UBERON:0004537,1.93e-12,59;UBERON:0006965,1.93e-12,59;UBERON:0000055,2.49e-12,68;UBERON:0004573,3.69e-11,33;UBERON:0004571,3.69e-11,33;UBERON:0004111,4.22e-11,240;UBERON:0000025,4.67e-11,192;UBERON:0004535,8.93e-11,109;UBERON:0001009,4.28e-10,112;UBERON:0002199,3.01e-07,46;UBERON:0002416,3.01e-07,46;UBERON:0002097,6.50e-07,41 | |||
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| |||
|short_description=p1@MAGED1 | |||
}} |
Latest revision as of 23:02, 15 September 2015
Short description: | p1@MAGED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAGED1_5end |
Coexpression cluster: | C750_Smooth_Mesenchymal_Fibroblast_Hepatic_Chondrocyte_Lens_tenocyte |
Association with transcript: | 0bp_to_ENST00000375695, ENST00000430189, ENST00000470461, ENST00000485420, ENST00000486579, ENST00000494718_5end |
EntrezGene: | MAGED1 |
HGNC: | 6813 |
UniProt: | B4DQ04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.79e-22 | 121 |
muscle precursor cell | 6.59e-21 | 58 |
myoblast | 6.59e-21 | 58 |
multi-potent skeletal muscle stem cell | 6.59e-21 | 58 |
fibroblast | 8.84e-21 | 76 |
muscle cell | 5.27e-20 | 55 |
electrically responsive cell | 6.06e-18 | 61 |
electrically active cell | 6.06e-18 | 61 |
smooth muscle cell | 1.53e-17 | 43 |
smooth muscle myoblast | 1.53e-17 | 43 |
embryonic cell | 1.53e-16 | 250 |
vascular associated smooth muscle cell | 1.27e-13 | 32 |
skin fibroblast | 6.91e-08 | 23 |
extraembryonic cell | 3.36e-07 | 19 |