FFCP PHASE1:Hg19::chr8:121825088..121825094,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6641 | |EntrezGene=6641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11168 | |HGNC=11168 | ||
|TSSclassifier=strong | |||
|UniProt=E5RIX7 | |UniProt=E5RIX7 | ||
|association_with_transcript=0bp_to_ENST00000520717_5end | |association_with_transcript=0bp_to_ENST00000520717_5end | ||
|cluster_id=chr8:121825088..121825094,- | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_18_at_SNTB1_5end | |description=CAGE_peak_18_at_SNTB1_5end | ||
|id=chr8:121825088..121825094,- | |id=chr8:121825088..121825094,- | ||
|ontology_enrichment_celltype=CL:0000181!8.50e-16!12;CL:0000417!8.50e-16!12;CL:0000668!8.50e-16!12;CL:0000414!8.50e-16!12;CL:0000412!8.50e-16!12;CL:0000182!8.50e-16!12;CL:0000223!4.87e-11!59;CL:0000167!7.75e-09!1;CL:0000164!7.75e-09!1;CL:0000502!7.75e-09!1;CL:0000172!7.75e-09!1;CL:0000173!7.75e-09!1;CL:0002351!7.75e-09!1;CL:0002563!1.48e-08!4 | |ontology_enrichment_celltype=CL:0000181!8.50e-16!12;CL:0000417!8.50e-16!12;CL:0000668!8.50e-16!12;CL:0000414!8.50e-16!12;CL:0000412!8.50e-16!12;CL:0000182!8.50e-16!12;CL:0000223!4.87e-11!59;CL:0000167!7.75e-09!1;CL:0000164!7.75e-09!1;CL:0000502!7.75e-09!1;CL:0000172!7.75e-09!1;CL:0000173!7.75e-09!1;CL:0002351!7.75e-09!1;CL:0002563!1.48e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.35e-44;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.17e-44,12;CL:0000223,1.11e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.88e-48;11!UBERON:0009497;7.21e-41;13!UBERON:0001041;6.82e-28;30!UBERON:0003104;2.15e-17;31 | |||
|ontology_enrichment_disease=DOID:305!3.34e-11!106;DOID:0050619!5.70e-09!1;DOID:1357!5.70e-09!1;DOID:0050687!6.24e-09!143;DOID:4430!7.75e-09!1;DOID:178!9.02e-09!1;DOID:326!9.02e-09!1;DOID:3978!9.02e-09!1;DOID:3394!9.02e-09!1;DOID:5844!9.02e-09!1;DOID:7!1.10e-08!39;DOID:3119!1.12e-08!14;DOID:12603!1.22e-08!1;DOID:299!3.61e-07!25;DOID:162!7.46e-07!235 | |ontology_enrichment_disease=DOID:305!3.34e-11!106;DOID:0050619!5.70e-09!1;DOID:1357!5.70e-09!1;DOID:0050687!6.24e-09!143;DOID:4430!7.75e-09!1;DOID:178!9.02e-09!1;DOID:326!9.02e-09!1;DOID:3978!9.02e-09!1;DOID:3394!9.02e-09!1;DOID:5844!9.02e-09!1;DOID:7!1.10e-08!39;DOID:3119!1.12e-08!14;DOID:12603!1.22e-08!1;DOID:299!3.61e-07!25;DOID:162!7.46e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:7;4.06e-13;39!DOID:5409;1.12e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:7,4.09e-14,39;DOID:305,1.24e-11,106;DOID:5409,1.12e-09,4;DOID:0050687,1.02e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0008835!5.89e-16!22;UBERON:0003894!5.89e-16!22;UBERON:0009854!3.15e-15!23;UBERON:0007499!6.02e-14!25;UBERON:0009497!6.02e-14!25;UBERON:0000015!6.02e-14!25;UBERON:0002423!6.02e-14!25;UBERON:0006235!6.02e-14!25;UBERON:0004161!6.02e-14!25;UBERON:0002107!7.25e-14!19;UBERON:0006925!7.25e-14!19;UBERON:0008836!7.25e-14!19;UBERON:0009856!2.22e-13!26;UBERON:0003929!2.83e-12!54;UBERON:0005911!4.55e-11!82;UBERON:0004921!4.28e-10!129;UBERON:0004185!4.28e-10!129;UBERON:0005057!5.37e-10!26;UBERON:0001764!5.70e-09!1;UBERON:0001825!5.70e-09!1;UBERON:0001242!1.48e-08!4;UBERON:0001262!1.48e-08!4;UBERON:0004786!1.48e-08!4;UBERON:0004808!1.48e-08!4;UBERON:0001277!1.48e-08!4;UBERON:0002365!2.68e-08!31;UBERON:0002330!2.68e-08!31;UBERON:0001007!6.03e-08!155;UBERON:0001555!6.03e-08!155;UBERON:0007026!6.03e-08!155;UBERON:0000949!2.36e-07!45;UBERON:0000077!2.65e-07!130;UBERON:0001041!2.72e-07!98;UBERON:0002368!2.74e-07!35;UBERON:0004119!4.60e-07!169;UBERON:0000925!4.60e-07!169;UBERON:0006595!4.60e-07!169;UBERON:0003350!5.24e-07!5 | |ontology_enrichment_uberon=UBERON:0008835!5.89e-16!22;UBERON:0003894!5.89e-16!22;UBERON:0009854!3.15e-15!23;UBERON:0007499!6.02e-14!25;UBERON:0009497!6.02e-14!25;UBERON:0000015!6.02e-14!25;UBERON:0002423!6.02e-14!25;UBERON:0006235!6.02e-14!25;UBERON:0004161!6.02e-14!25;UBERON:0002107!7.25e-14!19;UBERON:0006925!7.25e-14!19;UBERON:0008836!7.25e-14!19;UBERON:0009856!2.22e-13!26;UBERON:0003929!2.83e-12!54;UBERON:0005911!4.55e-11!82;UBERON:0004921!4.28e-10!129;UBERON:0004185!4.28e-10!129;UBERON:0005057!5.37e-10!26;UBERON:0001764!5.70e-09!1;UBERON:0001825!5.70e-09!1;UBERON:0001242!1.48e-08!4;UBERON:0001262!1.48e-08!4;UBERON:0004786!1.48e-08!4;UBERON:0004808!1.48e-08!4;UBERON:0001277!1.48e-08!4;UBERON:0002365!2.68e-08!31;UBERON:0002330!2.68e-08!31;UBERON:0001007!6.03e-08!155;UBERON:0001555!6.03e-08!155;UBERON:0007026!6.03e-08!155;UBERON:0000949!2.36e-07!45;UBERON:0000077!2.65e-07!130;UBERON:0001041!2.72e-07!98;UBERON:0002368!2.74e-07!35;UBERON:0004119!4.60e-07!169;UBERON:0000925!4.60e-07!169;UBERON:0006595!4.60e-07!169;UBERON:0003350!5.24e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.18e-28;19!UBERON:0006925;3.18e-28;19!UBERON:0002423;1.24e-21;25!UBERON:0002365;1.19e-16;31!UBERON:0002330;1.19e-16;31!UBERON:0002368;3.80e-15;33!UBERON:0000949;1.58e-11;43!UBERON:0002417;1.12e-07;58!UBERON:0000916;1.12e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.07e-28,19;UBERON:0006925,3.07e-28,19;UBERON:0008836,3.07e-28,19;UBERON:0008835,1.71e-24,22;UBERON:0003894,1.71e-24,22;UBERON:0009854,1.84e-23,23;UBERON:0007499,1.21e-21,25;UBERON:0009497,1.21e-21,25;UBERON:0000015,1.21e-21,25;UBERON:0002423,1.21e-21,25;UBERON:0006235,1.21e-21,25;UBERON:0004161,1.21e-21,25;UBERON:0009856,7.73e-21,26;UBERON:0002365,1.37e-17,31;UBERON:0002330,1.37e-17,31;UBERON:0002368,1.18e-15,35;UBERON:0000949,2.58e-12,45;UBERON:0005911,1.51e-10,82;UBERON:0003929,2.34e-10,54;UBERON:0005172,2.34e-10,54;UBERON:0005173,2.34e-10,54;UBERON:0001041,5.77e-10,87;UBERON:0002530,1.59e-09,59;UBERON:0002417,2.25e-09,60;UBERON:0000916,2.25e-09,60;UBERON:0005177,1.22e-08,101;UBERON:0009569,7.95e-08,112;UBERON:0004921,2.19e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0.424059214301822,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54435498075768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,2.32991899054908,2.28471228690949,1.64831716762333,2.96575592958414,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,3.50132854320776,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0.424059214301822,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54435498075768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,2.32991899054908,2.28471228690949,1.64831716762333,2.96575592958414,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,3.50132854320776,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p18@SNTB1 | |short_description=p18@SNTB1 | ||
}} | }} |
Latest revision as of 22:53, 15 September 2015
Short description: | p18@SNTB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SNTB1_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | 0bp_to_ENST00000520717_5end |
EntrezGene: | SNTB1 |
HGNC: | 11168 |
UniProt: | E5RIX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.17e-44 | 12 |
endodermal cell | 1.11e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.07e-28 | 19 |
digestive gland | 3.07e-28 | 19 |
liver bud | 3.07e-28 | 19 |
hepatic diverticulum | 1.71e-24 | 22 |
liver primordium | 1.71e-24 | 22 |
digestive tract diverticulum | 1.84e-23 | 23 |
epithelial sac | 1.21e-21 | 25 |
epithelium of foregut-midgut junction | 1.21e-21 | 25 |
anatomical boundary | 1.21e-21 | 25 |
hepatobiliary system | 1.21e-21 | 25 |
foregut-midgut junction | 1.21e-21 | 25 |
septum transversum | 1.21e-21 | 25 |
sac | 7.73e-21 | 26 |
exocrine gland | 1.37e-17 | 31 |
exocrine system | 1.37e-17 | 31 |
endocrine gland | 1.18e-15 | 35 |
endocrine system | 2.58e-12 | 45 |
endo-epithelium | 1.51e-10 | 82 |
gut epithelium | 2.34e-10 | 54 |
abdomen element | 2.34e-10 | 54 |
abdominal segment element | 2.34e-10 | 54 |
foregut | 5.77e-10 | 87 |
gland | 1.59e-09 | 59 |
abdominal segment of trunk | 2.25e-09 | 60 |
abdomen | 2.25e-09 | 60 |
trunk region element | 1.22e-08 | 101 |
subdivision of trunk | 7.95e-08 | 112 |
subdivision of digestive tract | 2.19e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 4.09e-14 | 39 |
carcinoma | 1.24e-11 | 106 |
lung small cell carcinoma | 1.12e-09 | 4 |
cell type cancer | 1.02e-08 | 143 |