FFCP PHASE1:Hg19::chr10:102505147..102505162,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5076 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8616 | |||
|TSSclassifier=strong | |||
|UniProt=Q02962 | |||
|association_with_transcript=-305bp_to_ENST00000355243,ENST00000361791,ENST00000370294,ENST00000370296,ENST00000428433,NM_000278,NM_003987,NM_003988,NM_003989,NM_003990,uc001krk.3,uc001krl.3,uc001krm.3,uc001krn.3,uc001kro.3,uc010qps.1_5end | |||
|cluster_id=chr10:102505147..102505162,+ | |||
|coexpression_cluster_id=C1556 | |||
|description=CAGE_peak_9_at_PAX2_5end | |||
|id=chr10:102505147..102505162,+ | |||
|ontology_enrichment_celltype=CL:1000507!3.69e-14!12;CL:1000494!3.69e-14!12;CL:1000497!3.84e-13!18;CL:0002518!3.84e-13!18;CL:1000449!1.44e-10!16;CL:0000650!3.04e-10!3;CL:1000618!3.04e-10!3;CL:1001318!3.04e-10!3;CL:0002173!3.04e-10!3;CL:1000500!3.04e-10!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.55e-98;2!UBERON:0005754;6.58e-50;1!UBERON:0003918;9.93e-21;10!UBERON:0007687;9.93e-21;10!UBERON:0003104;1.23e-07;31 | |||
|ontology_enrichment_disease=DOID:3347!2.90e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!7.30e-29!27;UBERON:0003918!7.30e-29!27;UBERON:0005095!7.30e-29!27;UBERON:0007687!7.30e-29!27;UBERON:0000489!4.83e-24!32;UBERON:0006947!6.46e-22!3;UBERON:0004054!6.46e-22!3;UBERON:0006554!3.38e-20!44;UBERON:0000058!4.30e-20!26;UBERON:0001008!1.07e-19!45;UBERON:0000080!4.96e-18!18;UBERON:0002120!4.96e-18!18;UBERON:0004875!4.96e-18!18;UBERON:0005721!4.96e-18!18;UBERON:0005754!4.96e-18!18;UBERON:0007297!4.96e-18!18;UBERON:0005904!1.40e-16!4;UBERON:0004876!3.83e-16!20;UBERON:0005172!1.18e-15!55;UBERON:0005173!1.18e-15!55;UBERON:0003887!2.47e-15!21;UBERON:0009773!3.69e-14!12;UBERON:0001231!3.69e-14!12;UBERON:0004810!3.69e-14!12;UBERON:0006555!3.89e-14!17;UBERON:0005103!3.89e-14!17;UBERON:0000083!3.89e-14!17;UBERON:0009201!3.89e-14!17;UBERON:0004819!3.89e-14!17;UBERON:0006553!3.89e-14!17;UBERON:0003074!3.89e-14!17;UBERON:0003060!3.89e-14!17;UBERON:0002417!6.80e-14!61;UBERON:0000916!6.80e-14!61;UBERON:0003064!1.64e-13!37;UBERON:0004211!1.44e-10!16;UBERON:0001285!1.44e-10!16;UBERON:0007684!1.44e-10!16;UBERON:0003220!1.44e-10!16;UBERON:0004208!1.44e-10!16;UBERON:0003135!2.17e-10!11;UBERON:0003567!3.04e-10!3;UBERON:0003838!3.04e-10!3;UBERON:0005169!3.04e-10!3;UBERON:0002321!3.04e-10!3;UBERON:0005215!3.04e-10!3;UBERON:0002303!3.04e-10!3;UBERON:0002319!3.04e-10!3;UBERON:0003103!4.47e-10!69;UBERON:0005177!9.65e-10!107;UBERON:0001301!1.65e-08!1;UBERON:0001000!1.91e-08!1;UBERON:0005352!1.91e-08!1;UBERON:0000998!2.04e-08!1;UBERON:0006868!2.04e-08!1;UBERON:0009569!1.02e-07!113;UBERON:0003101!1.08e-07!22;UBERON:0000079!1.08e-07!22;UBERON:0003886!2.15e-07!63;UBERON:0001851!6.65e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.95e-147;3!UBERON:0004054;6.95e-147;3!UBERON:0005904;1.57e-110;4!UBERON:0001301;1.46e-50;1!UBERON:0001000;3.10e-50;1!UBERON:0005352;3.10e-50;1!UBERON:0000998;6.58e-50;1!UBERON:0006868;6.58e-50;1!UBERON:0000058;5.23e-45;10!UBERON:0003135;5.00e-41;11!UBERON:0004175;4.93e-22;21!UBERON:0003101;4.42e-21;22!UBERON:0000079;4.42e-21;22!UBERON:0000473;1.80e-07;8!UBERON:0003133;5.19e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.93e-147,3;UBERON:0004054,8.93e-147,3;UBERON:0005904,1.89e-110,4;UBERON:0001301,1.46e-50,1;UBERON:0001000,3.99e-50,1;UBERON:0005352,3.99e-50,1;UBERON:0000998,6.58e-50,1;UBERON:0006868,6.58e-50,1;UBERON:0003135,5.35e-41,11;UBERON:0000058,3.20e-24,19;UBERON:0000080,5.74e-23,9;UBERON:0002120,5.74e-23,9;UBERON:0004875,5.74e-23,9;UBERON:0005721,5.74e-23,9;UBERON:0005754,5.74e-23,9;UBERON:0007297,5.74e-23,9;UBERON:0003101,4.58e-21,22;UBERON:0000079,4.58e-21,22;UBERON:0004876,5.14e-19,11;UBERON:0004175,1.15e-18,25;UBERON:0002113,5.19e-18,26;UBERON:0003918,5.19e-18,26;UBERON:0011143,5.19e-18,26;UBERON:0005095,5.19e-18,26;UBERON:0007687,5.19e-18,26;UBERON:0003887,1.57e-17,12;UBERON:0000489,2.87e-15,31;UBERON:0006554,2.17e-10,47;UBERON:0001008,3.42e-10,48;UBERON:0003133,3.53e-10,48;UBERON:0005172,3.71e-09,54;UBERON:0005173,3.71e-09,54;UBERON:0005156,1.93e-08,59;UBERON:0000990,1.93e-08,59;UBERON:0002417,2.51e-08,60;UBERON:0000916,2.51e-08,60;UBERON:0003064,3.92e-08,28;UBERON:0005103,1.49e-07,8;UBERON:0000083,1.49e-07,8;UBERON:0009201,1.49e-07,8;UBERON:0006553,1.49e-07,8;UBERON:0003074,1.49e-07,8;UBERON:0003060,1.49e-07,8;UBERON:0000473,1.80e-07,8;UBERON:0003103,1.92e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0.422206515571503,0,0,0,0,0.812839312631559,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0.242780379534093,2.36750641709634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84398670132466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,2.51782023047991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0.215927591218621,0,0.142953088353313,0,0.697448552208751,0.347716544605159,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@PAX2 | |||
}} |
Latest revision as of 22:09, 15 September 2015
Short description: | p9@PAX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PAX2_5end |
Coexpression cluster: | C1556_epididymis_seminal_Renal_ductus_kidney_rhabdomyosarcoma_renal |
Association with transcript: | -305bp_to_ENST00000355243, ENST00000361791, ENST00000370294, ENST00000370296, ENST00000428433, NM_000278, NM_003987, NM_003988, NM_003989, NM_003990, uc001krk.3, uc001krl.3, uc001krm.3, uc001krn.3, uc001kro.3, uc010qps.1_5end |
EntrezGene: | PAX2 |
HGNC: | 8616 |
UniProt: | Q02962 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data