FFCP PHASE1:Hg19::chr2:233390890..233390903,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1965 | |||
|TSSclassifier=strong | |||
|UniProt=Q07001,F8WBS0,F8WB46,B4E3W4,B4DKT6 | |||
|association_with_transcript=0bp_to_ENST00000258385,ENST00000412233,ENST00000446616,ENST00000457943,ENST00000536614_5end | |||
|cluster_id=chr2:233390890..233390903,+ | |||
|coexpression_cluster_id=C737 | |||
|description=CAGE_peak_3_at_CHRND_5end | |||
|id=chr2:233390890..233390903,+ | |||
|ontology_enrichment_celltype=CL:0000188!4.32e-33!9;CL:0000594!1.41e-14!3;CL:0000515!6.56e-11!4;CL:0000680!1.81e-09!57;CL:0000056!1.81e-09!57;CL:0000355!1.81e-09!57 | |||
|ontology_enrichment_celltype_v019=CL:0000188;6.08e-15;9!CL:0002575;1.44e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,6.23e-15,9;CL:0002575,1.39e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.67e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.86e-16!61;UBERON:0002036!1.86e-16!61;UBERON:0003082!1.86e-16!61;UBERON:0002385!8.09e-16!63;UBERON:0001015!8.09e-16!63;UBERON:0000383!8.09e-16!63;UBERON:0004290!7.09e-14!70;UBERON:0000914!1.06e-12!83;UBERON:0002329!1.06e-12!83;UBERON:0003077!1.06e-12!83;UBERON:0003059!1.06e-12!83;UBERON:0007282!1.06e-12!83;UBERON:0009618!1.06e-12!83;UBERON:0007285!1.06e-12!83;UBERON:0000486!2.52e-11!82;UBERON:0001630!6.56e-11!2;UBERON:0005090!6.56e-11!2;UBERON:0000341!9.67e-11!2;UBERON:0003127!1.72e-10!2;UBERON:0000490!4.35e-08!138;UBERON:0005256!9.91e-08!143;UBERON:0003104!1.32e-07!238;UBERON:0009142!1.32e-07!238;UBERON:0001723!1.98e-07!3;UBERON:0001033!1.98e-07!3;UBERON:0010056!1.98e-07!3;UBERON:0002100!3.25e-07!216;UBERON:0000475!5.74e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;6.56e-32;16!UBERON:0002036;6.56e-32;16!UBERON:0002385;5.95e-16;31!UBERON:0001015;5.95e-16;31!UBERON:0000383;5.95e-16;31!UBERON:0001389;1.16e-15;1!UBERON:0000026;1.16e-15;1!UBERON:0008784;1.16e-15;1!UBERON:0006058;1.16e-15;1!UBERON:0003663;1.16e-15;1!UBERON:0004256;1.16e-15;1!UBERON:0004708;1.16e-15;1!UBERON:0002101;1.16e-15;1!UBERON:0004709;1.16e-15;1!UBERON:0002529;1.16e-15;1!UBERON:0010538;1.16e-15;1!UBERON:0003661;1.16e-15;1!UBERON:0010890;1.16e-15;1!UBERON:0002471;1.16e-15;1!UBERON:0001383;1.16e-15;1!UBERON:0010758;1.16e-15;1!UBERON:0010707;1.16e-15;1!UBERON:0000978;1.16e-15;1!UBERON:0002103;1.16e-15;1!UBERON:0001665;1.16e-15;1!UBERON:0003823;1.16e-15;1!UBERON:0000154;1.16e-15;1!UBERON:0010709;1.16e-15;1!UBERON:0007029;2.75e-15;1!UBERON:0001301;2.75e-15;1!UBERON:0005090;1.73e-08;2!UBERON:0001630;1.73e-08;2!UBERON:0000341;2.67e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.16e-15,1;UBERON:0001389,1.16e-15,1;UBERON:0000026,1.16e-15,1;UBERON:0008784,1.16e-15,1;UBERON:0006058,1.16e-15,1;UBERON:0003663,1.16e-15,1;UBERON:0004256,1.16e-15,1;UBERON:0004708,1.16e-15,1;UBERON:0002101,1.16e-15,1;UBERON:0004709,1.16e-15,1;UBERON:0002529,1.16e-15,1;UBERON:0010538,1.16e-15,1;UBERON:0003661,1.16e-15,1;UBERON:0010890,1.16e-15,1;UBERON:0002471,1.16e-15,1;UBERON:0001383,1.16e-15,1;UBERON:0004357,1.16e-15,1;UBERON:0004347,1.16e-15,1;UBERON:0005420,1.16e-15,1;UBERON:0005732,1.16e-15,1;UBERON:0010758,1.16e-15,1;UBERON:0010707,1.16e-15,1;UBERON:0000978,1.16e-15,1;UBERON:0002103,1.16e-15,1;UBERON:0001665,1.16e-15,1;UBERON:0003823,1.16e-15,1;UBERON:0000154,1.16e-15,1;UBERON:0010709,1.16e-15,1;UBERON:0005733,1.16e-15,1;UBERON:0005730,1.16e-15,1;UBERON:0007029,2.38e-15,1;UBERON:0001301,3.17e-15,1;UBERON:0005090,1.73e-08,2;UBERON:0001630,1.73e-08,2;UBERON:0000341,2.67e-08,2;UBERON:0001134,4.72e-08,62;UBERON:0002036,4.72e-08,62;UBERON:0003082,4.72e-08,62;UBERON:0002385,8.62e-08,64;UBERON:0001015,8.62e-08,64;UBERON:0000383,8.62e-08,64;UBERON:0002329,5.46e-07,71;UBERON:0003059,5.46e-07,71;UBERON:0007282,5.46e-07,71;UBERON:0004290,5.46e-07,71;UBERON:0009618,5.46e-07,71;UBERON:0003077,6.91e-07,72;UBERON:0007285,6.91e-07,72;UBERON:0007524,8.68e-07,73;UBERON:0005256,9.57e-07,122 | |||
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|short_description=p3@CHRND | |||
}} |
Latest revision as of 21:47, 15 September 2015
Short description: | p3@CHRND |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHRND_5end |
Coexpression cluster: | C737_rhabdomyosarcoma_skeletal_mesenchymal_Skeletal_Pericytes_tongue_diaphragm |
Association with transcript: | 0bp_to_ENST00000258385, ENST00000412233, ENST00000446616, ENST00000457943, ENST00000536614_5end |
EntrezGene: | CHRND |
HGNC: | 1965 |
UniProt: | Q07001F8WBS0F8WB46B4E3W4B4DKT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 6.23e-15 | 9 |
central nervous system pericyte | 1.39e-08 | 2 |