FFCP PHASE1:Hg19::chr2:233385181..233385201,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=646960 | |EntrezGene=646960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=39433 | |HGNC=39433 | ||
|TSSclassifier=strong | |||
|UniProt=P0CW18 | |UniProt=P0CW18 | ||
|association_with_transcript=8bp_to_NM_001195129_5end | |association_with_transcript=8bp_to_NM_001195129_5end | ||
|cluster_id=chr2:233385181..233385201,+ | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_6_at_PRSS56_5end | |description=CAGE_peak_6_at_PRSS56_5end | ||
|id=chr2:233385181..233385201,+ | |id=chr2:233385181..233385201,+ | ||
|ontology_enrichment_celltype=CL:0000819!4.44e-11!1 | |ontology_enrichment_celltype=CL:0000819!4.44e-11!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.44e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.65e-41;29 | |||
|ontology_enrichment_disease=DOID:305!4.59e-14!106;DOID:0050687!1.24e-11!143;DOID:0060073!4.44e-11!1;DOID:8675!4.44e-11!1;DOID:162!9.33e-10!235;DOID:14566!1.69e-09!239 | |ontology_enrichment_disease=DOID:305!4.59e-14!106;DOID:0050687!1.24e-11!143;DOID:0060073!4.44e-11!1;DOID:8675!4.44e-11!1;DOID:162!9.33e-10!235;DOID:14566!1.69e-09!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.89e-16,106;DOID:0050687,2.63e-14,143;DOID:162,7.82e-10,235;DOID:14566,1.33e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.40e-88!9;UBERON:0001557!1.86e-41!19;UBERON:0008947!4.95e-25!38;UBERON:0003258!4.95e-25!38;UBERON:0000072!1.92e-20!46;UBERON:0000065!1.46e-17!53;UBERON:0000063!5.22e-13!97;UBERON:0001004!1.49e-12!72;UBERON:0001041!7.69e-09!98;UBERON:0000077!1.08e-07!130;UBERON:0004921!1.08e-07!129;UBERON:0004185!1.08e-07!129 | |ontology_enrichment_uberon=UBERON:0001737!1.40e-88!9;UBERON:0001557!1.86e-41!19;UBERON:0008947!4.95e-25!38;UBERON:0003258!4.95e-25!38;UBERON:0000072!1.92e-20!46;UBERON:0000065!1.46e-17!53;UBERON:0000063!5.22e-13!97;UBERON:0001004!1.49e-12!72;UBERON:0001041!7.69e-09!98;UBERON:0000077!1.08e-07!130;UBERON:0004921!1.08e-07!129;UBERON:0004185!1.08e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.57e-106;9!UBERON:0001557;3.57e-106;9!UBERON:0000072;2.14e-29;37!UBERON:0000065;1.66e-27;44!UBERON:0001004;2.97e-12;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.91e-106,9;UBERON:0001557,3.42e-50,19;UBERON:0008947,1.44e-31,38;UBERON:0003258,1.44e-31,38;UBERON:0000072,2.11e-25,47;UBERON:0000065,5.05e-22,54;UBERON:0001004,7.07e-16,74;UBERON:0001041,2.17e-13,87;UBERON:0004921,1.44e-09,118;UBERON:0001007,1.24e-07,145;UBERON:0001555,1.24e-07,145;UBERON:0007026,1.24e-07,145;UBERON:0001048,6.93e-07,160;UBERON:0004119,7.74e-07,160;UBERON:0000925,7.74e-07,160;UBERON:0006595,7.74e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24782920075703,1.85443159085912,0.964044119533928,1.98529150918309,1.52515610864684,2.13543557199987,2.96628877952362,1.56977172100277,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5575571379191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2018514961311,0,0,0,0,0,0,0,0,0,3.70390775964567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16747403000242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26217249754548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24782920075703,1.85443159085912,0.964044119533928,1.98529150918309,1.52515610864684,2.13543557199987,2.96628877952362,1.56977172100277,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5575571379191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2018514961311,0,0,0,0,0,0,0,0,0,3.70390775964567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16747403000242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26217249754548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@PRSS56 | |short_description=p6@PRSS56 | ||
}} | }} |
Latest revision as of 21:42, 15 September 2015
Short description: | p6@PRSS56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PRSS56_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 8bp_to_NM_001195129_5end |
EntrezGene: | PRSS56 |
HGNC: | 39433 |
UniProt: | P0CW18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.44e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.91e-106 | 9 |
upper respiratory tract | 3.42e-50 | 19 |
respiratory primordium | 1.44e-31 | 38 |
endoderm of foregut | 1.44e-31 | 38 |
segment of respiratory tract | 2.11e-25 | 47 |
respiratory tract | 5.05e-22 | 54 |
respiratory system | 7.07e-16 | 74 |
foregut | 2.17e-13 | 87 |
subdivision of digestive tract | 1.44e-09 | 118 |
digestive system | 1.24e-07 | 145 |
digestive tract | 1.24e-07 | 145 |
primitive gut | 1.24e-07 | 145 |
primordium | 6.93e-07 | 160 |
endoderm-derived structure | 7.74e-07 | 160 |
endoderm | 7.74e-07 | 160 |
presumptive endoderm | 7.74e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.89e-16 | 106 |
cell type cancer | 2.63e-14 | 143 |
cancer | 7.82e-10 | 235 |
disease of cellular proliferation | 1.33e-09 | 239 |