FFCP PHASE1:Hg19::chr3:148939639..148939648,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1356 | |EntrezGene=1356 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2295 | |HGNC=2295 | ||
|TSSclassifier=strong | |||
|UniProt=D6RE86,E9PFZ2 | |UniProt=D6RE86,E9PFZ2 | ||
|association_with_transcript=-25bp_to_ENST00000455472,ENST00000481169_5end | |association_with_transcript=-25bp_to_ENST00000455472,ENST00000481169_5end | ||
|cluster_id=chr3:148939639..148939648,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_CP_5end | |description=CAGE_peak_3_at_CP_5end | ||
|id=chr3:148939639..148939648,- | |id=chr3:148939639..148939648,- | ||
|ontology_enrichment_celltype=CL:0000181!5.61e-08!12;CL:0000417!5.61e-08!12;CL:0000668!5.61e-08!12;CL:0000414!5.61e-08!12;CL:0000412!5.61e-08!12;CL:0000182!5.61e-08!12 | |ontology_enrichment_celltype=CL:0000181!5.61e-08!12;CL:0000417!5.61e-08!12;CL:0000668!5.61e-08!12;CL:0000414!5.61e-08!12;CL:0000412!5.61e-08!12;CL:0000182!5.61e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.85e-14;12!CL:0002149;4.40e-07;6!CL:0002255;4.40e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.85e-14,12;CL:0002149,3.41e-07,6;CL:0002255,3.41e-07,6;CL:0000223,5.19e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.38e-12;11!UBERON:0003104;4.11e-10;31!UBERON:0009497;4.93e-10;13!UBERON:0006601;2.45e-07;82!UBERON:0001041;3.66e-07;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3001;4.40e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,3.41e-07,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;1.59e-13;19!UBERON:0006925;1.59e-13;19!UBERON:0002368;6.42e-12;33!UBERON:0007023;2.01e-10;114!UBERON:0000125;4.79e-10;9!UBERON:0002308;4.79e-10;9!UBERON:0002423;1.02e-09;25!UBERON:0000073;3.73e-09;53!UBERON:0002616;3.73e-09;53!UBERON:0000949;4.29e-09;43!UBERON:0002780;1.24e-08;41!UBERON:0001890;1.24e-08;41!UBERON:0002298;1.76e-07;6!UBERON:0002365;2.84e-07;31!UBERON:0002330;2.84e-07;31!UBERON:0002420;3.34e-07;9!UBERON:0007245;3.34e-07;9!UBERON:0010009;3.34e-07;9!UBERON:0010011;3.34e-07;9!UBERON:0000454;3.34e-07;9!UBERON:0001017;4.91e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.03e-37,114;UBERON:0003075,1.49e-18,82;UBERON:0007284,1.49e-18,82;UBERON:0002346,2.42e-17,86;UBERON:0001049,3.87e-16,56;UBERON:0005068,3.87e-16,56;UBERON:0006241,3.87e-16,56;UBERON:0007135,3.87e-16,56;UBERON:0011216,3.89e-15,223;UBERON:0001017,4.81e-14,81;UBERON:0000073,8.64e-14,53;UBERON:0002616,8.64e-14,53;UBERON:0002107,1.59e-13,19;UBERON:0006925,1.59e-13,19;UBERON:0008836,1.59e-13,19;UBERON:0010371,4.61e-13,104;UBERON:0002368,2.64e-12,35;UBERON:0001016,5.11e-12,89;UBERON:0000955,7.87e-12,68;UBERON:0006238,7.87e-12,68;UBERON:0007499,1.14e-11,25;UBERON:0000949,1.43e-11,45;UBERON:0010314,1.75e-11,132;UBERON:0008835,2.33e-11,22;UBERON:0003894,2.33e-11,22;UBERON:0003056,2.55e-11,61;UBERON:0009856,4.04e-11,26;UBERON:0009854,9.18e-11,23;UBERON:0002780,5.44e-10,41;UBERON:0001890,5.44e-10,41;UBERON:0003080,5.44e-10,41;UBERON:0006240,5.44e-10,41;UBERON:0000125,5.71e-10,9;UBERON:0002308,5.71e-10,9;UBERON:0000025,7.13e-10,192;UBERON:0009497,1.02e-09,25;UBERON:0000015,1.02e-09,25;UBERON:0002423,1.02e-09,25;UBERON:0006235,1.02e-09,25;UBERON:0004161,1.02e-09,25;UBERON:0004111,1.80e-08,240;UBERON:0004121,2.68e-08,171;UBERON:0000924,2.68e-08,171;UBERON:0006601,2.68e-08,171;UBERON:0003528,5.82e-08,34;UBERON:0002020,5.82e-08,34;UBERON:0003076,6.33e-08,15;UBERON:0003057,6.33e-08,15;UBERON:0002365,2.09e-07,31;UBERON:0002330,2.09e-07,31;UBERON:0002298,2.32e-07,6;UBERON:0002420,3.51e-07,9;UBERON:0007245,3.51e-07,9;UBERON:0010009,3.51e-07,9;UBERON:0010011,3.51e-07,9;UBERON:0000454,3.51e-07,9;UBERON:0000483,3.85e-07,306;UBERON:0005177,4.00e-07,101;UBERON:0000119,5.71e-07,309;UBERON:0002530,6.78e-07,59 | |||
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|short_description=p3@CP | |short_description=p3@CP | ||
}} | }} |
Latest revision as of 21:09, 15 September 2015
Short description: | p3@CP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CP_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -25bp_to_ENST00000455472, ENST00000481169_5end |
EntrezGene: | CP |
HGNC: | 2295 |
UniProt: | D6RE86E9PFZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.85e-14 | 12 |
epithelial cell of uterus | 3.41e-07 | 6 |
stromal cell of endometrium | 3.41e-07 | 6 |
endodermal cell | 5.19e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 3.41e-07 | 6 |