FFCP PHASE1:Hg19::chr9:131669649..131669685,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:131669649..131669685,+
|short_description=p7@LRRC8A
|description=CAGE_peak_7_at_LRRC8A_5end
|association_with_transcript=205bp_to_AY143166_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56262 | |EntrezGene=56262 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=19027 | |HGNC=19027 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWT6 | |UniProt=Q8IWT6 | ||
|association_with_transcript=205bp_to_AY143166_5end | |||
|cluster_id=chr9:131669649..131669685,+ | |||
|description=CAGE_peak_7_at_LRRC8A_5end | |||
|id=chr9:131669649..131669685,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.40e-09!248;CL:0000220!2.47e-09!246;CL:0000066!1.30e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002368;8.37e-11;13!CL:1000746;3.24e-08;7!CL:1000612;3.24e-08;7!CL:0002328;3.29e-08;3!CL:0002188;6.86e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.15e-10,13;CL:0002076,5.67e-09,42;CL:1000746,2.46e-08,7;CL:1000612,2.46e-08,7;CL:0002328,2.63e-08,3;CL:0002188,5.88e-08,5;CL:0002321,1.34e-07,250;CL:0000115,1.00e-06,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.77e-07;3!DOID:127;1.77e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.04e-07,3;DOID:127,1.04e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000468!1.81e-10!659;UBERON:0004111!4.91e-09!241;UBERON:0000467!5.90e-09!625;UBERON:0000480!9.25e-09!626;UBERON:0000483!1.46e-08!309;UBERON:0000119!3.46e-08!312;UBERON:0000475!1.18e-07!365;UBERON:0000025!2.83e-07!194;UBERON:0000477!6.73e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;3.24e-08;7!UBERON:0001229;3.24e-08;7!UBERON:0004815;3.29e-08;3!UBERON:0002031;3.29e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,2.46e-08,7;UBERON:0000074,2.46e-08,7;UBERON:0001229,2.46e-08,7;UBERON:0001230,2.46e-08,7;UBERON:0003220,2.46e-08,7;UBERON:0005749,2.46e-08,7;UBERON:0004199,2.46e-08,7;UBERON:0004209,2.46e-08,7;UBERON:0004198,2.46e-08,7;UBERON:0004815,2.63e-08,3;UBERON:0002031,2.63e-08,3;UBERON:0005103,3.12e-07,8;UBERON:0000083,3.12e-07,8;UBERON:0009201,3.12e-07,8;UBERON:0006553,3.12e-07,8;UBERON:0003074,3.12e-07,8;UBERON:0003060,3.12e-07,8 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,5.00366491765652,1.34088328328186,2.61701557230111,0,0,0,0.245733936501509,4.18680700783456,0,0.527533956456907,0.123766352960047,0,0.672325146451775,2.41077811209591,1.46062018077475,0,0.123121058076788,1.02000345622126,0.313454721478088,0,1.36874425072884,1.12988375635323,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0.309632246632152,6.43594857135249,1.50602959389125,6.28581817283539,0.0774672005803016,0,0,0,0.401088894940283,0,0.223915474239924,0.32389366601898,0,0.290796477559129,0.377875943688809,0,0.464858073811369,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.564727018627814,0.545812300115692,0.224723484445085,0.612167784741805,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0,0,0,0,0.196709770113833,0,0.411202997999018,0.83593247695339,0.32592226663359,0,1.94826728407911,0.668462741311041,0.294605907474837,0.443067789167242,0.270803863765016,0.384273959177026,0.650296737799391,0.164437904603676,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.226618685395132,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.756278537312543,1.77383517970051,0.43917392846563,0.130979075497713,0,0.370784442784429,0,0.174129737299267,0.26591592103773,0.476981248610684,0,0,0.993812036833525,0.860234595106124,0,0.56530794192401,0.838998872419812,1.92582629358047,1.67195973229448,0.516833518338658,0,0.33472061276467,1.61131726843659,2.28081631715554,0.976248230192678,0.735326160691737,1.62028389576352,0.446498641420399,0.898117490504679,0.337834441449967,0,0.949265659568129,2.19842092716489,0,0,0.436094052142534,0.496971951695318,0.759783069987479,0.132409180813219,0,0,1.68203280042692,0,1.48000529050296,0,0.404132016209064,0.326923806226917,0,0,0,1.24864030732128,0.570471821544449,0.896692083310806,0.587172493218824,0.161872944368132,0.702254033511242,0,0.491337269247072,0.206651562351531,0,0.494533858557114,1.82032272387605,0.718618141816238,0,0.250237039743928,0,0.438977620880838,0.612975591598039,0.600952235626387,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0,0.515281080091258,0.558350568994769,0.506328996723799,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.604512589365842,0,0.966304265816484,0,0.573609190778008,0.853815942907168,0.265059536642971,0.232387885739037,0.414644220061482,0.504641701751257,0,0,0.643240938192885,1.38134921352481,0,0,0.354920400119532,0.505754070234305,0,0.330881918197182,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0.4115740113314,0,0,0.982827216677626,0,0,0.368965315629341,0.171567810298526,0.439001141634502,2.24803506515239,0.703702806881416,0.277765335475589,0,0,0,0,0.234817388471643,1.15493158208859,0.462985512576611,1.71228737011138,0.790204397959275,0.858486162094873,0,0.936017060556951,0.445893486866185,0.93733833986777,1.00789276919316,0.992425680696705,0.0895585227028483,0.581267877027924,1.53353071666084,0,0.176096868026452,0.414656231081544,0.144119953416961,0.50496973370552,0.126995788584338,0,0,0,0.411309970813294,0,1.14330573052231,0,0,0.2933531432838,0.387815147273333,0,0.845302752556,1.32969058292435,1.04007436911366,0,1.41849132023278,0,0,0,0,0.65147236858747,0,1.58390374586686,0.301439377059586,0,0.399891964728228,0,0,2.10833939483032,0.239624855491583,0,0,0.434343920002738,1.43833425785268,0.358121926479791,0.112085143993527,0.197030760201927,0.431255149719035,0.898401253958239,1.27047312111232,1.30139853857622,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0.737476674166813,0.347534457872331,0,0.686286847621712,0,0,0.213455115606889,0,0,0,0.744323423456331,0.153461973288062,0.841980283299221,0.256278298511402,0,0.160853921143607,0,0.462629081407967,0.355123450626254,0.0821271560138091,0.519254429183621,0.464841513839837,0.483437798366489,3.80962293576241,3.03867263488458,0.459257792658427,1.0925470080403,0.393373244878272,0,0.308061348417659,0,1.46139224653261,0.316654886678627,3.4120015221269,1.36074964221213,0.863663664408557,1.54227252690289,0.270946437543853,1.50506932156456,0,0,0.671624264166535,0,0.261435451024901,0.256450125116389,0.656029291399411,0.976135183992909,0.206082023295445,0.366277859273374,0.247528499761764,0.574265537996172,0.650060246036521,0,0.096670718292122,0.308097234229289,0.460511024178389,0.275673144969061,0.322260734604821,0.145016693914229,0.0852266274161009,0.0890320356467374,2.64455864577565,3.45942121257191,0,1.0115778085555,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.572499546967965,0,0,0.571890581771475,0,0,0.318203247925937,0,0.3597449151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|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,5.00366491765652,1.34088328328186,2.61701557230111,0,0,0,0.245733936501509,4.18680700783456,0,0.527533956456907,0.123766352960047,0,0.672325146451775,2.41077811209591,1.46062018077475,0,0.123121058076788,1.02000345622126,0.313454721478088,0,1.36874425072884,1.12988375635323,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0.309632246632152,6.43594857135249,1.50602959389125,6.28581817283539,0.0774672005803016,0,0,0,0.401088894940283,0,0.223915474239924,0.32389366601898,0,0.290796477559129,0.377875943688809,0,0.464858073811369,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.564727018627814,0.545812300115692,0.224723484445085,0.612167784741805,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0,0,0,0,0.196709770113833,0,0.411202997999018,0.83593247695339,0.32592226663359,0,1.94826728407911,0.668462741311041,0.294605907474837,0.443067789167242,0.270803863765016,0.384273959177026,0.650296737799391,0.164437904603676,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.226618685395132,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.756278537312543,1.77383517970051,0.43917392846563,0.130979075497713,0,0.370784442784429,0,0.174129737299267,0.26591592103773,0.476981248610684,0,0,0.993812036833525,0.860234595106124,0,0.56530794192401,0.838998872419812,1.92582629358047,1.67195973229448,0.516833518338658,0,0.33472061276467,1.61131726843659,2.28081631715554,0.976248230192678,0.735326160691737,1.62028389576352,0.446498641420399,0.898117490504679,0.337834441449967,0,0.949265659568129,2.19842092716489,0,0,0.436094052142534,0.496971951695318,0.759783069987479,0.132409180813219,0,0,1.68203280042692,0,1.48000529050296,0,0.404132016209064,0.326923806226917,0,0,0,1.24864030732128,0.570471821544449,0.896692083310806,0.587172493218824,0.161872944368132,0.702254033511242,0,0.491337269247072,0.206651562351531,0,0.494533858557114,1.82032272387605,0.718618141816238,0,0.250237039743928,0,0.438977620880838,0.612975591598039,0.600952235626387,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0,0.515281080091258,0.558350568994769,0.506328996723799,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.604512589365842,0,0.966304265816484,0,0.573609190778008,0.853815942907168,0.265059536642971,0.232387885739037,0.414644220061482,0.504641701751257,0,0,0.643240938192885,1.38134921352481,0,0,0.354920400119532,0.505754070234305,0,0.330881918197182,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0.4115740113314,0,0,0.982827216677626,0,0,0.368965315629341,0.171567810298526,0.439001141634502,2.24803506515239,0.703702806881416,0.277765335475589,0,0,0,0,0.234817388471643,1.15493158208859,0.462985512576611,1.71228737011138,0.790204397959275,0.858486162094873,0,0.936017060556951,0.445893486866185,0.93733833986777,1.00789276919316,0.992425680696705,0.0895585227028483,0.581267877027924,1.53353071666084,0,0.176096868026452,0.414656231081544,0.144119953416961,0.50496973370552,0.126995788584338,0,0,0,0.411309970813294,0,1.14330573052231,0,0,0.2933531432838,0.387815147273333,0,0.845302752556,1.32969058292435,1.04007436911366,0,1.41849132023278,0,0,0,0,0.65147236858747,0,1.58390374586686,0.301439377059586,0,0.399891964728228,0,0,2.10833939483032,0.239624855491583,0,0,0.434343920002738,1.43833425785268,0.358121926479791,0.112085143993527,0.197030760201927,0.431255149719035,0.898401253958239,1.27047312111232,1.30139853857622,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0.737476674166813,0.347534457872331,0,0.686286847621712,0,0,0.213455115606889,0,0,0,0.744323423456331,0.153461973288062,0.841980283299221,0.256278298511402,0,0.160853921143607,0,0.462629081407967,0.355123450626254,0.0821271560138091,0.519254429183621,0.464841513839837,0.483437798366489,3.80962293576241,3.03867263488458,0.459257792658427,1.0925470080403,0.393373244878272,0,0.308061348417659,0,1.46139224653261,0.316654886678627,3.4120015221269,1.36074964221213,0.863663664408557,1.54227252690289,0.270946437543853,1.50506932156456,0,0,0.671624264166535,0,0.261435451024901,0.256450125116389,0.656029291399411,0.976135183992909,0.206082023295445,0.366277859273374,0.247528499761764,0.574265537996172,0.650060246036521,0,0.096670718292122,0.308097234229289,0.460511024178389,0.275673144969061,0.322260734604821,0.145016693914229,0.0852266274161009,0.0890320356467374,2.64455864577565,3.45942121257191,0,1.0115778085555,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.572499546967965,0,0,0.571890581771475,0,0,0.318203247925937,0,0.3597449151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| ||
|short_description=p7@LRRC8A | |||
}} | }} |
Latest revision as of 21:09, 15 September 2015
Short description: | p7@LRRC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LRRC8A_5end |
Coexpression cluster: | NA |
Association with transcript: | 205bp_to_AY143166_5end |
EntrezGene: | LRRC8A |
HGNC: | 19027 |
UniProt: | Q8IWT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.15e-10 | 13 |
endo-epithelial cell | 5.67e-09 | 42 |
glomerular cell | 2.46e-08 | 7 |
kidney corpuscule cell | 2.46e-08 | 7 |
bronchial epithelial cell | 2.63e-08 | 3 |
glomerular endothelial cell | 5.88e-08 | 5 |
embryonic cell | 1.34e-07 | 250 |
endothelial cell | 1.00e-06 | 36 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 2.46e-08 | 7 |
renal glomerulus | 2.46e-08 | 7 |
renal corpuscle | 2.46e-08 | 7 |
glomerular capsule | 2.46e-08 | 7 |
metanephric mesenchyme | 2.46e-08 | 7 |
glomerular tuft | 2.46e-08 | 7 |
S-shaped body | 2.46e-08 | 7 |
renal vesicle | 2.46e-08 | 7 |
comma-shaped body | 2.46e-08 | 7 |
lower respiratory tract epithelium | 2.63e-08 | 3 |
epithelium of bronchus | 2.63e-08 | 3 |
mesonephric epithelium | 3.12e-07 | 8 |
mesonephric tubule | 3.12e-07 | 8 |
nephric duct | 3.12e-07 | 8 |
renal duct | 3.12e-07 | 8 |
mesonephric duct | 3.12e-07 | 8 |
pronephric duct | 3.12e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.04e-07 | 3 |
leiomyoma | 1.04e-07 | 3 |