FFCP PHASE1:Hg19::chr4:141348999..141349013,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1047 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2060 | |||
|TSSclassifier=strong | |||
|UniProt=O14967 | |||
|association_with_transcript=108bp_to_ENST00000325617_5end | |||
|cluster_id=chr4:141348999..141349013,- | |||
|description=CAGE_peak_3_at_CLGN_5end | |||
|id=chr4:141348999..141349013,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002602;1.18e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,6.64e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!8.76e-12!239;DOID:305!1.95e-11!106;DOID:0050687!5.05e-11!143;DOID:162!9.79e-11!235 | |||
|ontology_enrichment_disease_v019=DOID:114;1.18e-07;2!DOID:0050615;2.66e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.98e-12,106;DOID:0050687,1.23e-10,143;DOID:162,7.15e-10,235;DOID:14566,1.71e-09,239;DOID:114,1.45e-07,2;DOID:0050615,2.26e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004921!5.00e-09!129;UBERON:0004185!5.00e-09!129;UBERON:0005156!1.86e-08!59;UBERON:0000990!1.86e-08!59;UBERON:0001007!1.12e-07!155;UBERON:0001555!1.12e-07!155;UBERON:0007026!1.12e-07!155;UBERON:0004119!1.33e-07!169;UBERON:0000925!1.33e-07!169;UBERON:0006595!1.33e-07!169;UBERON:0000466!3.07e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.17e-10;5!UBERON:0002216;1.17e-10;5!UBERON:0011134;1.17e-10;5!UBERON:0002209;1.17e-10;5!UBERON:0002213;1.17e-10;5!UBERON:0007844;1.17e-10;5!UBERON:0011138;1.17e-10;5!UBERON:0001130;1.17e-10;5!UBERON:0001066;1.17e-10;5!UBERON:0001468;1.17e-10;5!UBERON:0006444;1.18e-07;2!UBERON:0001995;1.18e-07;2!UBERON:0004715;1.18e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.17e-10,5;UBERON:0002216,1.17e-10,5;UBERON:0011134,1.17e-10,5;UBERON:0002209,1.17e-10,5;UBERON:0002213,1.17e-10,5;UBERON:0005856,1.17e-10,5;UBERON:0005866,1.17e-10,5;UBERON:0005863,1.17e-10,5;UBERON:0007844,1.17e-10,5;UBERON:0011138,1.17e-10,5;UBERON:0001130,1.17e-10,5;UBERON:0001066,1.17e-10,5;UBERON:0001468,1.17e-10,5;UBERON:0006444,6.64e-08,2;UBERON:0001995,6.64e-08,2;UBERON:0004715,6.64e-08,2;UBERON:0005911,7.22e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,2.72285976512103,1.98838425436749,0.672325146451775,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.870627715885752,0,0,0,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.44905874525234,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.826606249406124,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0,0.184099797284599,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0.337169380156203,0.482022059766964,0.110293972732394,0,0,0,0.196221465125346,1.15424147083917,0,0,0,0,0,0,1.77236972004421,0,0,1.20097467208968,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,0,1.08506009479894,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0.153461973288062,0.561320188866147,0.256278298511402,0,0.160853921143607,0,0.616838775210622,0.532685175939381,0.246381468041427,0.519254429183621,0,0.483437798366489,0,4.14364450211533,0.229628896329213,0,1.04899531967539,0,0.308061348417659,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.41254749960294,0,0,0,0.676695028044854,0,0.15350367472613,0,0.429680979473094,0.725083469571143,0.170453254832202,0.0890320356467374,0.661139661443912,0.960950336825531,0,12.7458803877993,0,0.94443704049192,0,0.308033580176089,0,0.869932992075073,0,0,0,0,0,0,1.71175595213568,0.318203247925937,0,0.179872457583315,0.54907405947211,0.353437207037059,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,1.83827061539827,1.13008116620243,0.551365343546124,0.66343897524122,0,0.578775534266688,1.31178950409327,0.202910376962704,0,0,0,0,0,0.354761064070598,0.844430541190656,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22896305723383,2.23676107892416,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.89936136621401,0,0.211125408127993,0,0,0.503865495708552,0,0.123084805461069,0,0,10.0251857818341,0,0,0,0,0,0,0,0.7812832832557,0.699679999969566,0,0.568967241427498,0,0.236387681767936,0,0,0.694499979733169,0,0.120596438625408,0,0,0,0,2.72346158797475,0.697118721393016,0,1.25336261431701,0,0.359030577639089,0.217294743844016,0,0,0,0,0,0.332423363800313,0,0,0.167821586975843,0,0,0,0,0,0.216388639742091,0,0.353830258013357,0,0,0,0,0,0,0,0.364909578431332,0.391329237864179,0.728341138602278,0,0,0,0,0.150323419414493,0.207376382794494,1.99396161812156,0,0.941798755221676,1.19472429772959,1.42304773014896,0,0,0,0.0870592065804026,1.04836000945218,0,0.290268993867255,0.292357268344742,0,0.0969890164884194,0.441280633457501,0,0.137041924646751,0.397429223405979,0,0,0.721429382263803,0,1.19885765749278,16.1381267212599,0,2.23073497220554,10.5160002531349,0.49701014226173,2.59263438078475,0,0,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,2.1964690054889,1.28767814440971,1.56220020209311,0.268733889946905,0,0,0,0,0.13480708770837,10.8270229666224,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,2.15144807199414,6.33320151154169,0.714695326373367,5.29673576292345,0,0.542999601753713,0,0.326587360109409,0,0,0,0.113312091520126,0.293104467356165,0,0.129282956361551,0.13223260174269,6.84347351537318,0,0.213574825135389,0.314408610199332,0,0,0.592834895693833,0.243585196761792,5.74507131993164,0,0,0,0,2.66991963625398,0,0,0,0.573409195690071,0,0.124192805882767,0.138348634936231,0.124980407962107,0.151649117541648,0,0.470531639396343,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0.757612021100357,0.251567901752575,0.889811221596536,1.37304041038154,0,0,0.443565449968902,0.477890301491107,4.49803112163605,0.931577741257556,0,0,1.5652351854352,0,0,0.813741466409323,0.181848659202559,1.39633724155235,0.464033759878494,0.398095888698616,0,0,0.336749488765919,0,0,0,0.782982875895635,0,0,0,0.537266523244462,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0.327609848846413,0.737318726261158,0.845248493434508,0,0.426766918776564,1.37771983728653,0,2.39337735327393,2.37795163123056,0,0.76736622782191,0,3.14531883711793,0.109209638192014,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,2.0710797781803,0,0.376051641746286,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,1.14986184875636,0,0,0.606965604236632,2.73194629621557,0,0,0.17148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| |||
|short_description=p3@CLGN | |||
}} |
Latest revision as of 19:40, 15 September 2015
Short description: | p3@CLGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLGN_5end |
Coexpression cluster: | NA |
Association with transcript: | 108bp_to_ENST00000325617_5end |
EntrezGene: | CLGN |
HGNC: | 2060 |
UniProt: | O14967 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 6.64e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 1.17e-10 | 5 |
symphysis | 1.17e-10 | 5 |
nonsynovial joint | 1.17e-10 | 5 |
fibrous joint | 1.17e-10 | 5 |
cartilaginous joint | 1.17e-10 | 5 |
developing mesenchymal condensation | 1.17e-10 | 5 |
pre-cartilage condensation | 1.17e-10 | 5 |
cartilaginous condensation | 1.17e-10 | 5 |
cartilage element | 1.17e-10 | 5 |
post-cranial axial skeletal system | 1.17e-10 | 5 |
vertebral column | 1.17e-10 | 5 |
intervertebral disk | 1.17e-10 | 5 |
intervertebral joint | 1.17e-10 | 5 |
annulus fibrosus | 6.64e-08 | 2 |
fibrocartilage | 6.64e-08 | 2 |
annulus fibrosus disci intervertebralis | 6.64e-08 | 2 |
endo-epithelium | 7.22e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.98e-12 | 106 |
cell type cancer | 1.23e-10 | 143 |
cancer | 7.15e-10 | 235 |
disease of cellular proliferation | 1.71e-09 | 239 |
heart disease | 1.45e-07 | 2 |
respiratory system cancer | 2.26e-07 | 16 |