FFCP PHASE1:Hg19::chr11:116703597..116703615,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=345 | |EntrezGene=345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=610 | |HGNC=610 | ||
|TSSclassifier=strong | |||
|UniProt=P02656 | |UniProt=P02656 | ||
|association_with_transcript=65bp_to_V01513_5end | |association_with_transcript=65bp_to_V01513_5end | ||
|cluster_id=chr11:116703597..116703615,+ | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_5_at_APOC3_5end | |description=CAGE_peak_5_at_APOC3_5end | ||
|id=chr11:116703597..116703615,+ | |id=chr11:116703597..116703615,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.22e-10!12;CL:0000417!5.22e-10!12;CL:0000668!5.22e-10!12;CL:0000414!5.22e-10!12;CL:0000412!5.22e-10!12;CL:0000182!5.22e-10!12 | |ontology_enrichment_celltype=CL:0000181!5.22e-10!12;CL:0000417!5.22e-10!12;CL:0000668!5.22e-10!12;CL:0000414!5.22e-10!12;CL:0000412!5.22e-10!12;CL:0000182!5.22e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.71e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.71e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.46e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.52e-16!19;UBERON:0006925!1.52e-16!19;UBERON:0008836!1.52e-16!19;UBERON:0008835!2.75e-14!22;UBERON:0003894!2.75e-14!22;UBERON:0009854!1.15e-13!23;UBERON:0007499!1.44e-12!25;UBERON:0009497!1.44e-12!25;UBERON:0000015!1.44e-12!25;UBERON:0002423!1.44e-12!25;UBERON:0006235!1.44e-12!25;UBERON:0004161!1.44e-12!25;UBERON:0005057!4.39e-12!26;UBERON:0009856!4.39e-12!26;UBERON:0000160!5.66e-11!27;UBERON:0003929!8.74e-11!54;UBERON:0004921!3.31e-10!129;UBERON:0004185!3.31e-10!129;UBERON:0002365!4.00e-10!31;UBERON:0002330!4.00e-10!31;UBERON:0002368!5.87e-09!35;UBERON:0005409!1.61e-08!35;UBERON:0001007!2.89e-08!155;UBERON:0001555!2.89e-08!155;UBERON:0007026!2.89e-08!155;UBERON:0002108!5.13e-08!14;UBERON:0004119!1.83e-07!169;UBERON:0000925!1.83e-07!169;UBERON:0006595!1.83e-07!169;UBERON:0002530!2.54e-07!59;UBERON:0000949!6.09e-07!45;UBERON:0005911!6.86e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.02e-15;19!UBERON:0006925;1.02e-15;19!UBERON:0002108;2.70e-15;4!UBERON:0002423;4.94e-12;25!UBERON:0002365;1.12e-09;31!UBERON:0002330;1.12e-09;31!UBERON:0000160;1.47e-09;17!UBERON:0002368;3.29e-08;33!UBERON:0005409;1.32e-07;22!UBERON:0002114;2.79e-07;2!UBERON:0001007;4.58e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.86e-16,19;UBERON:0006925,9.86e-16,19;UBERON:0008836,9.86e-16,19;UBERON:0002108,2.90e-15,4;UBERON:0008835,1.22e-13,22;UBERON:0003894,1.22e-13,22;UBERON:0009854,4.62e-13,23;UBERON:0007499,4.80e-12,25;UBERON:0009497,4.80e-12,25;UBERON:0000015,4.80e-12,25;UBERON:0002423,4.80e-12,25;UBERON:0006235,4.80e-12,25;UBERON:0004161,4.80e-12,25;UBERON:0009856,1.35e-11,26;UBERON:0002365,8.92e-10,31;UBERON:0002330,8.92e-10,31;UBERON:0000160,1.49e-09,17;UBERON:0002368,1.08e-08,35;UBERON:0003929,1.72e-08,54;UBERON:0002114,2.97e-07,2;UBERON:0004921,4.21e-07,118;UBERON:0000949,8.13e-07,45;UBERON:0005409,8.71e-07,25 | |||
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|short_description=p5@APOC3 | |short_description=p5@APOC3 | ||
}} | }} |
Latest revision as of 19:38, 15 September 2015
Short description: | p5@APOC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APOC3_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | 65bp_to_V01513_5end |
EntrezGene: | APOC3 |
HGNC: | 610 |
UniProt: | P02656 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.71e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 9.86e-16 | 19 |
digestive gland | 9.86e-16 | 19 |
liver bud | 9.86e-16 | 19 |
small intestine | 2.90e-15 | 4 |
hepatic diverticulum | 1.22e-13 | 22 |
liver primordium | 1.22e-13 | 22 |
digestive tract diverticulum | 4.62e-13 | 23 |
epithelial sac | 4.80e-12 | 25 |
epithelium of foregut-midgut junction | 4.80e-12 | 25 |
anatomical boundary | 4.80e-12 | 25 |
hepatobiliary system | 4.80e-12 | 25 |
foregut-midgut junction | 4.80e-12 | 25 |
septum transversum | 4.80e-12 | 25 |
sac | 1.35e-11 | 26 |
exocrine gland | 8.92e-10 | 31 |
exocrine system | 8.92e-10 | 31 |
intestine | 1.49e-09 | 17 |
endocrine gland | 1.08e-08 | 35 |
gut epithelium | 1.72e-08 | 54 |
duodenum | 2.97e-07 | 2 |
subdivision of digestive tract | 4.21e-07 | 118 |
endocrine system | 8.13e-07 | 45 |
gastrointestinal system | 8.71e-07 | 25 |