FFCP PHASE1:Hg19::chr7:116963293..116963327,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:116963293..116963327,-
|short_description=p2@WNT2
|description=CAGE_peak_2_at_WNT2_5end
|association_with_transcript=15bp_to_ENST00000265441,NM_003391,NR_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7472 | |EntrezGene=7472 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12780 | |HGNC=12780 | ||
|TSSclassifier=strong | |||
|UniProt=P09544,A4D0V1 | |UniProt=P09544,A4D0V1 | ||
|association_with_transcript=15bp_to_ENST00000265441,NM_003391,NR_024047,uc003viz.2,uc003vja.2_5end | |||
|cluster_id=chr7:116963293..116963327,- | |||
|coexpression_cluster_id=C4647 | |||
|description=CAGE_peak_2_at_WNT2_5end | |||
|id=chr7:116963293..116963327,- | |||
|ontology_enrichment_celltype=CL:0002537!3.23e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.17e-24;19!CL:0002537;4.70e-21;5!CL:0002577;8.61e-13;3!CL:0000134;4.26e-08;55!CL:0000048;5.51e-07;58!CL:0000034;6.88e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.06e-24,19;CL:0002537,5.32e-21,5;CL:0002577,7.50e-13,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000478!9.03e-18!24;UBERON:0005631!2.75e-16!14;UBERON:0000158!2.75e-16!14;UBERON:0007023!5.57e-13!115;UBERON:0000305!2.49e-10!7;UBERON:0004871!8.30e-09!8;UBERON:0002619!1.02e-08!22;UBERON:0001017!1.63e-08!82;UBERON:0005743!2.45e-08!86;UBERON:0004923!6.13e-08!57;UBERON:0001893!8.72e-08!34;UBERON:0003124!1.06e-07!7;UBERON:0001869!1.22e-07!32;UBERON:0001950!2.27e-07!20;UBERON:0000073!2.34e-07!94;UBERON:0001016!2.34e-07!94;UBERON:0002780!2.74e-07!41;UBERON:0001890!2.74e-07!41;UBERON:0006240!2.74e-07!41;UBERON:0000956!3.09e-07!25;UBERON:0000203!3.09e-07!25;UBERON:0002791!4.05e-07!33;UBERON:0003080!5.45e-07!42;UBERON:0004121!5.85e-07!169;UBERON:0000924!6.84e-07!173;UBERON:0006601!6.84e-07!173;UBERON:0000062!8.79e-07!511;UBERON:0002020!9.98e-07!34;UBERON:0003528!9.98e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;5.84e-40;24!UBERON:0005631;2.43e-25;10!UBERON:0000158;2.43e-25;10!UBERON:0000305;4.49e-21;7!UBERON:0001987;1.55e-16;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,6.19e-40,24;UBERON:0005631,8.90e-40,14;UBERON:0000158,8.90e-40,14;UBERON:0000305,5.34e-21,7;UBERON:0003124,2.01e-20,7;UBERON:0004871,2.74e-18,8;UBERON:0001987,1.43e-16,4;UBERON:0004340,1.43e-16,4;UBERON:0004923,1.44e-15,66 | |||
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| ||
|short_description=p2@WNT2 | |||
}} | }} |
Latest revision as of 19:38, 15 September 2015
Short description: | p2@WNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_WNT2_5end |
Coexpression cluster: | C4647_amniotic_Fibroblast_cord_Mesenchymal_Placental_tenocyte_lung |
Association with transcript: | 15bp_to_ENST00000265441, NM_003391, NR_024047, uc003viz.2, uc003vja.2_5end |
EntrezGene: | WNT2 |
HGNC: | 12780 |
UniProt: | P09544A4D0V1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.06e-24 | 19 |
amnion mesenchymal stem cell | 5.32e-21 | 5 |
placental epithelial cell | 7.50e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 6.19e-40 | 24 |
extraembryonic membrane | 8.90e-40 | 14 |
membranous layer | 8.90e-40 | 14 |
amnion | 5.34e-21 | 7 |
chorion | 2.01e-20 | 7 |
somatic layer of lateral plate mesoderm | 2.74e-18 | 8 |
placenta | 1.43e-16 | 4 |
allantois | 1.43e-16 | 4 |
organ component layer | 1.44e-15 | 66 |