FFCP PHASE1:Hg19::chr11:116701286..116701320,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=345 | |EntrezGene=345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=610 | |HGNC=610 | ||
|TSSclassifier=strong | |||
|UniProt=P02656 | |UniProt=P02656 | ||
|association_with_transcript=0bp_to_DQ892044,DQ895238,X00567_5end | |association_with_transcript=0bp_to_DQ892044,DQ895238,X00567_5end | ||
|cluster_id=chr11:116701286..116701320,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_APOC3_5end | |description=CAGE_peak_3_at_APOC3_5end | ||
|id=chr11:116701286..116701320,+ | |id=chr11:116701286..116701320,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.07e-23!12;CL:0000417!1.07e-23!12;CL:0000668!1.07e-23!12;CL:0000414!1.07e-23!12;CL:0000412!1.07e-23!12;CL:0000182!1.07e-23!12;CL:0000223!5.74e-12!59;CL:0002231!1.59e-11!3;CL:0002563!5.74e-09!4 | |ontology_enrichment_celltype=CL:0000181!1.07e-23!12;CL:0000417!1.07e-23!12;CL:0000668!1.07e-23!12;CL:0000414!1.07e-23!12;CL:0000412!1.07e-23!12;CL:0000182!1.07e-23!12;CL:0000223!5.74e-12!59;CL:0002231!1.59e-11!3;CL:0002563!5.74e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.93e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.93e-11,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.94e-26!19;UBERON:0006925!2.94e-26!19;UBERON:0008836!2.94e-26!19;UBERON:0008835!1.53e-22!22;UBERON:0003894!1.53e-22!22;UBERON:0009854!1.62e-21!23;UBERON:0007499!1.03e-19!25;UBERON:0009497!1.03e-19!25;UBERON:0000015!1.03e-19!25;UBERON:0002423!1.03e-19!25;UBERON:0006235!1.03e-19!25;UBERON:0004161!1.03e-19!25;UBERON:0003929!2.25e-19!54;UBERON:0005057!6.45e-19!26;UBERON:0009856!6.45e-19!26;UBERON:0002365!1.07e-15!31;UBERON:0002330!1.07e-15!31;UBERON:0004921!7.70e-15!129;UBERON:0004185!7.70e-15!129;UBERON:0002368!8.76e-14!35;UBERON:0000160!2.49e-13!27;UBERON:0002530!4.51e-12!59;UBERON:0005911!4.73e-12!82;UBERON:0001007!7.48e-12!155;UBERON:0001555!7.48e-12!155;UBERON:0007026!7.48e-12!155;UBERON:0004119!1.27e-10!169;UBERON:0000925!1.27e-10!169;UBERON:0006595!1.27e-10!169;UBERON:0000949!1.75e-10!45;UBERON:0005409!3.40e-10!35;UBERON:0001242!5.74e-09!4;UBERON:0001262!5.74e-09!4;UBERON:0004786!5.74e-09!4;UBERON:0004808!5.74e-09!4;UBERON:0001277!5.74e-09!4;UBERON:0001155!1.45e-08!9;UBERON:0005172!2.21e-08!55;UBERON:0005173!2.21e-08!55;UBERON:0002417!1.88e-07!61;UBERON:0000916!1.88e-07!61;UBERON:0003350!2.43e-07!5;UBERON:0000059!4.33e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;8.14e-26;17!UBERON:0002108;3.53e-24;4!UBERON:0005409;3.62e-20;22!UBERON:0002107;9.86e-18;19!UBERON:0006925;9.86e-18;19!UBERON:0002423;1.76e-13;25!UBERON:0004921;2.43e-12;33!UBERON:0002365;7.48e-11;31!UBERON:0002330;7.48e-11;31!UBERON:0001007;7.50e-11;81!UBERON:0002368;2.00e-09;33!UBERON:0000949;6.07e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.14e-26,17;UBERON:0002108,3.68e-24,4;UBERON:0005409,8.09e-18,25;UBERON:0002107,9.86e-18,19;UBERON:0006925,9.86e-18,19;UBERON:0008836,9.86e-18,19;UBERON:0008835,2.56e-15,22;UBERON:0003894,2.56e-15,22;UBERON:0004921,1.15e-14,118;UBERON:0009854,1.19e-14,23;UBERON:0007499,1.76e-13,25;UBERON:0009497,1.76e-13,25;UBERON:0000015,1.76e-13,25;UBERON:0002423,1.76e-13,25;UBERON:0006235,1.76e-13,25;UBERON:0004161,1.76e-13,25;UBERON:0009856,5.83e-13,26;UBERON:0001007,1.08e-11,145;UBERON:0001555,1.08e-11,145;UBERON:0007026,1.08e-11,145;UBERON:0003929,1.26e-11,54;UBERON:0002365,7.27e-11,31;UBERON:0002330,7.27e-11,31;UBERON:0004119,1.81e-10,160;UBERON:0000925,1.81e-10,160;UBERON:0006595,1.81e-10,160;UBERON:0002368,1.29e-09,35;UBERON:0011216,2.38e-08,223;UBERON:0002530,6.70e-08,59;UBERON:0000949,1.85e-07,45;UBERON:0005911,1.86e-07,82 | |||
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|short_description=p3@APOC3 | |short_description=p3@APOC3 | ||
}} | }} |
Latest revision as of 19:31, 15 September 2015
Short description: | p3@APOC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_APOC3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_DQ892044, DQ895238, X00567_5end |
EntrezGene: | APOC3 |
HGNC: | 610 |
UniProt: | P02656 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.93e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.14e-26 | 17 |
small intestine | 3.68e-24 | 4 |
gastrointestinal system | 8.09e-18 | 25 |
liver | 9.86e-18 | 19 |
digestive gland | 9.86e-18 | 19 |
liver bud | 9.86e-18 | 19 |
hepatic diverticulum | 2.56e-15 | 22 |
liver primordium | 2.56e-15 | 22 |
subdivision of digestive tract | 1.15e-14 | 118 |
digestive tract diverticulum | 1.19e-14 | 23 |
epithelial sac | 1.76e-13 | 25 |
epithelium of foregut-midgut junction | 1.76e-13 | 25 |
anatomical boundary | 1.76e-13 | 25 |
hepatobiliary system | 1.76e-13 | 25 |
foregut-midgut junction | 1.76e-13 | 25 |
septum transversum | 1.76e-13 | 25 |
sac | 5.83e-13 | 26 |
digestive system | 1.08e-11 | 145 |
digestive tract | 1.08e-11 | 145 |
primitive gut | 1.08e-11 | 145 |
gut epithelium | 1.26e-11 | 54 |
exocrine gland | 7.27e-11 | 31 |
exocrine system | 7.27e-11 | 31 |
endoderm-derived structure | 1.81e-10 | 160 |
endoderm | 1.81e-10 | 160 |
presumptive endoderm | 1.81e-10 | 160 |
endocrine gland | 1.29e-09 | 35 |
organ system subdivision | 2.38e-08 | 223 |
gland | 6.70e-08 | 59 |
endocrine system | 1.85e-07 | 45 |
endo-epithelium | 1.86e-07 | 82 |