FFCP PHASE1:Hg19::chr11:116692171..116692179,-: Difference between revisions
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|id=chr11:116692171..116692179,-
|short_description=p7@APOA4
|description=CAGE_peak_7_at_APOA4_5end
|association_with_transcript=191bp_to_M10373_5end
|EntrezGene=3...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=337 | |EntrezGene=337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=602 | |HGNC=602 | ||
|TSSclassifier=strong | |||
|UniProt=Q13784 | |UniProt=Q13784 | ||
|association_with_transcript=191bp_to_M10373_5end | |||
|cluster_id=chr11:116692171..116692179,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_7_at_APOA4_5end | |||
|id=chr11:116692171..116692179,- | |||
|ontology_enrichment_celltype=CL:0002322!1.64e-20!5;CL:0000148!8.89e-11!10;CL:0000541!8.89e-11!10;CL:0000147!5.75e-08!14 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002108!1.12e-15!14;UBERON:0000160!1.03e-14!27;UBERON:0005409!1.51e-11!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.01e-40;4!UBERON:0000160;1.41e-25;17!UBERON:0005409;2.97e-20;22!UBERON:0002114;6.76e-18;2!UBERON:0004921;1.02e-11;33!UBERON:0001871;2.35e-08;6!UBERON:0001555;1.65e-07;54!UBERON:0001155;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.81e-40,4;UBERON:0000160,1.41e-25,17;UBERON:0005409,4.90e-18,25;UBERON:0002114,6.76e-18,2;UBERON:0001871,2.35e-08,6;UBERON:0001155,8.37e-07,9 | |||
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|short_description=p7@APOA4 | |||
}} | }} |
Latest revision as of 19:14, 15 September 2015
Short description: | p7@APOA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_APOA4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 191bp_to_M10373_5end |
EntrezGene: | APOA4 |
HGNC: | 602 |
UniProt: | Q13784 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.81e-40 | 4 |
intestine | 1.41e-25 | 17 |
gastrointestinal system | 4.90e-18 | 25 |
duodenum | 6.76e-18 | 2 |
temporal lobe | 2.35e-08 | 6 |
colon | 8.37e-07 | 9 |