FFCP PHASE1:Hg19::chr20:33462829..33462852,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15814 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENST00000461051_5end | |||
|cluster_id=chr20:33462829..33462852,+ | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_5_at_ACSS2_5end | |||
|id=chr20:33462829..33462852,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.44e-15!12;CL:0000417!5.44e-15!12;CL:0000668!5.44e-15!12;CL:0000414!5.44e-15!12;CL:0000412!5.44e-15!12;CL:0000182!5.44e-15!12;CL:0000235!9.87e-15!10;CL:0002619!2.57e-12!3;CL:0000840!7.45e-07!5;CL:0001029!7.45e-07!5;CL:0000223!8.95e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.78e-53;6!CL:0000840;4.82e-14;5!CL:0000990;1.55e-09;8!CL:0000451;6.91e-08;10!CL:0000473;6.39e-07;39!CL:0000234;6.39e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.66e-53,6;CL:0000840,4.93e-14,5;CL:0001029,4.93e-14,5;CL:0002194,2.39e-13,59;CL:0000576,2.39e-13,59;CL:0000040,2.39e-13,59;CL:0000559,2.39e-13,59;CL:0002009,7.24e-13,61;CL:0000839,8.64e-12,66;CL:0000557,1.36e-11,67;CL:0000766,1.08e-10,72;CL:0000990,1.57e-09,8;CL:0000451,6.99e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.09e-15!19;UBERON:0006925!5.09e-15!19;UBERON:0008836!5.09e-15!19;UBERON:0009854!7.19e-15!23;UBERON:0009497!1.47e-13!25;UBERON:0000015!1.47e-13!25;UBERON:0002423!1.47e-13!25;UBERON:0006235!1.47e-13!25;UBERON:0004161!1.47e-13!25;UBERON:0009856!6.33e-13!26;UBERON:0005057!7.16e-13!26;UBERON:0008835!9.63e-13!22;UBERON:0003894!9.63e-13!22;UBERON:0000059!3.85e-12!11;UBERON:0002405!3.52e-11!115;UBERON:0007499!5.16e-11!25;UBERON:0005409!1.36e-10!35;UBERON:0001155!1.43e-10!9;UBERON:0005172!2.06e-10!55;UBERON:0005173!2.06e-10!55;UBERON:0004921!5.39e-10!129;UBERON:0004185!5.39e-10!129;UBERON:0000160!1.12e-09!27;UBERON:0003929!3.41e-09!54;UBERON:0002417!4.33e-09!61;UBERON:0000916!4.33e-09!61;UBERON:0002365!1.45e-08!31;UBERON:0002330!1.45e-08!31;UBERON:0001007!2.51e-08!155;UBERON:0001555!2.51e-08!155;UBERON:0007026!2.51e-08!155;UBERON:0002368!2.10e-07!35;UBERON:0004119!3.32e-07!169;UBERON:0000925!3.32e-07!169;UBERON:0006595!3.32e-07!169;UBERON:0004907!3.44e-07!5;UBERON:0005911!3.80e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.08e-12;17!UBERON:0002171;6.61e-10;1!UBERON:0006518;6.61e-10;1!UBERON:0008949;6.61e-10;1!UBERON:0000101;6.61e-10;1!UBERON:0002167;6.61e-10;1!UBERON:0005409;2.90e-09;22!UBERON:0001155;3.76e-09;9!UBERON:0000059;1.42e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.84e-12,17;UBERON:0002371,4.69e-10,76;UBERON:0002171,6.91e-10,1;UBERON:0006518,6.91e-10,1;UBERON:0008949,6.91e-10,1;UBERON:0000101,6.91e-10,1;UBERON:0002167,6.91e-10,1;UBERON:0001474,3.25e-09,82;UBERON:0001155,3.50e-09,9;UBERON:0004765,2.88e-08,90;UBERON:0005409,3.47e-08,25;UBERON:0002405,5.93e-08,93;UBERON:0000059,1.34e-07,11;UBERON:0002390,1.79e-07,98;UBERON:0003061,1.79e-07,98;UBERON:0001434,2.71e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,5.83008598834163,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70272798147026,0,0,10.3855165969499,11.6666923990509,9.1740992758017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,0.590789906681404,0,5.04252598026766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89407617044712,23.1664222487845,10.5528125224997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5948536769429,8.53837055434615,14.7583757638122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,3.98104772431402,1.94606641907346,3.05515072466813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,1.16495949527454,0.787831823072237,0.741742725430498,0.606631894687664,0,0,0,0,0,0,0,0,0,0,0,1.89133697518076,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,2.65013777824443,0,0,0,0,0.427149650270779,0,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,3.47283711485751,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p5@ACSS2 | |||
}} |
Latest revision as of 18:26, 15 September 2015
Short description: | p5@ACSS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACSS2_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | 9bp_to_ENST00000461051_5end |
EntrezGene: | ACSS2 |
HGNC: | 15814 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.66e-53 | 6 |
immature conventional dendritic cell | 4.93e-14 | 5 |
common dendritic progenitor | 4.93e-14 | 5 |
monopoietic cell | 2.39e-13 | 59 |
monocyte | 2.39e-13 | 59 |
monoblast | 2.39e-13 | 59 |
promonocyte | 2.39e-13 | 59 |
macrophage dendritic cell progenitor | 7.24e-13 | 61 |
myeloid lineage restricted progenitor cell | 8.64e-12 | 66 |
granulocyte monocyte progenitor cell | 1.36e-11 | 67 |
myeloid leukocyte | 1.08e-10 | 72 |
conventional dendritic cell | 1.57e-09 | 8 |
dendritic cell | 6.99e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.84e-12 | 17 |
bone marrow | 4.69e-10 | 76 |
lower lobe of right lung | 6.91e-10 | 1 |
right lung lobe | 6.91e-10 | 1 |
lower lobe of lung | 6.91e-10 | 1 |
lobe of lung | 6.91e-10 | 1 |
right lung | 6.91e-10 | 1 |
bone element | 3.25e-09 | 82 |
colon | 3.50e-09 | 9 |
skeletal element | 2.88e-08 | 90 |
gastrointestinal system | 3.47e-08 | 25 |
immune system | 5.93e-08 | 93 |
large intestine | 1.34e-07 | 11 |
hematopoietic system | 1.79e-07 | 98 |
blood island | 1.79e-07 | 98 |
skeletal system | 2.71e-07 | 100 |