FFCP PHASE1:Mm9::chr19:18805148..18805179,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2250 | |MCL_coexpression_id=2250 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18805148..18805179,+ | |||
|description=CAGE_peak_at_chr19:18805148..18805179,+ | |description=CAGE_peak_at_chr19:18805148..18805179,+ | ||
|id=chr19:18805148..18805179,+ | |id=chr19:18805148..18805179,+ | ||
|ontology_enrichment_celltype=CL:0000239!9.47e-19!6;CL:0000677!9.47e-19!6;CL:0000212!9.47e-19!6;CL:0000584!9.47e-19!6;CL:0000075!4.67e-16!7;CL:0000473!1.77e-14!3;CL:0000627!1.77e-14!3;CL:0000682!1.77e-14!3;CL:0002563!1.85e-12!9;CL:0002251!1.85e-12!9;CL:0000066!1.15e-10!25;CL:0002076!2.12e-07!15 | |ontology_enrichment_celltype=CL:0000239!9.47e-19!6;CL:0000677!9.47e-19!6;CL:0000212!9.47e-19!6;CL:0000584!9.47e-19!6;CL:0000075!4.67e-16!7;CL:0000473!1.77e-14!3;CL:0000627!1.77e-14!3;CL:0000682!1.77e-14!3;CL:0002563!1.85e-12!9;CL:0002251!1.85e-12!9;CL:0000066!1.15e-10!25;CL:0002076!2.12e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.83e-22,3;CL:0000239,1.13e-11,6;CL:0000677,1.13e-11,6;CL:0000584,1.13e-11,6;CL:0000066,2.36e-10,25;CL:0000075,4.33e-10,7;CL:0000473,5.36e-10,7;CL:0002563,5.72e-08,9;CL:0002251,5.72e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.18e-28!15;UBERON:0001242!4.85e-21!13;UBERON:0000060!4.85e-21!13;UBERON:0001262!4.85e-21!13;UBERON:0004786!4.85e-21!13;UBERON:0000160!6.94e-18!43;UBERON:0004923!3.34e-17!24;UBERON:0005409!1.41e-14!59;UBERON:0000331!8.23e-14!3;UBERON:0002116!8.23e-14!3;UBERON:0001204!8.23e-14!3;UBERON:0001168!8.23e-14!3;UBERON:0003350!1.85e-12!9;UBERON:0004808!1.85e-12!9;UBERON:0001277!1.85e-12!9;UBERON:0000485!3.65e-10!11;UBERON:0001155!4.66e-10!2;UBERON:0000059!4.66e-10!2;UBERON:0001962!5.16e-10!2;UBERON:0001961!5.16e-10!2;UBERON:0001744!5.16e-10!2;UBERON:0001007!2.13e-07!128;UBERON:0001555!2.13e-07!128;UBERON:0007026!2.13e-07!128;UBERON:0004119!3.06e-07!130;UBERON:0000925!3.06e-07!130;UBERON:0006595!3.06e-07!130;UBERON:0002465!5.99e-07!3 | |ontology_enrichment_uberon=UBERON:0000344!2.18e-28!15;UBERON:0001242!4.85e-21!13;UBERON:0000060!4.85e-21!13;UBERON:0001262!4.85e-21!13;UBERON:0004786!4.85e-21!13;UBERON:0000160!6.94e-18!43;UBERON:0004923!3.34e-17!24;UBERON:0005409!1.41e-14!59;UBERON:0000331!8.23e-14!3;UBERON:0002116!8.23e-14!3;UBERON:0001204!8.23e-14!3;UBERON:0001168!8.23e-14!3;UBERON:0003350!1.85e-12!9;UBERON:0004808!1.85e-12!9;UBERON:0001277!1.85e-12!9;UBERON:0000485!3.65e-10!11;UBERON:0001155!4.66e-10!2;UBERON:0000059!4.66e-10!2;UBERON:0001962!5.16e-10!2;UBERON:0001961!5.16e-10!2;UBERON:0001744!5.16e-10!2;UBERON:0001007!2.13e-07!128;UBERON:0001555!2.13e-07!128;UBERON:0007026!2.13e-07!128;UBERON:0004119!3.06e-07!130;UBERON:0000925!3.06e-07!130;UBERON:0006595!3.06e-07!130;UBERON:0002465!5.99e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.21e-17,15;UBERON:0001962,3.12e-15,2;UBERON:0001961,3.12e-15,2;UBERON:0001744,3.12e-15,2;UBERON:0004923,8.56e-11,24;UBERON:0002465,1.77e-10,3;UBERON:0001242,1.90e-09,13;UBERON:0001262,1.90e-09,13;UBERON:0004786,1.90e-09,13;UBERON:0001153,7.41e-09,1;UBERON:0001045,7.41e-09,1;UBERON:0003199,1.47e-08,1;UBERON:0000160,2.29e-08,31;UBERON:0003350,5.72e-08,9;UBERON:0004808,5.72e-08,9;UBERON:0001277,5.72e-08,9;UBERON:0005409,2.54e-07,47 | |||
|phase1_expression=0,6.2815573375085,4.09499315450582,0,0.500895729946347,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,3.44113921600755,4.01962374880514,3.4460959692726,2.80112602491656,0.760093677825496,0.252030129759931,5.98672378769323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69645822596266,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9426417148905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,6.2815573375085,4.09499315450582,0,0.500895729946347,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,3.44113921600755,4.01962374880514,3.4460959692726,2.80112602491656,0.760093677825496,0.252030129759931,5.98672378769323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69645822596266,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9426417148905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:18805148..18805179,+ | |short_description=p@chr19:18805148..18805179,+ | ||
}} | }} |
Latest revision as of 09:08, 6 August 2015
Short description: | p@chr19:18805148..18805179, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:18805148..18805179, + |
Coexpression cluster: | MCL_coexpression_mm9:2250 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.83e-22 | 3 |
brush border epithelial cell | 1.13e-11 | 6 |
gut absorptive cell | 1.13e-11 | 6 |
enterocyte | 1.13e-11 | 6 |
epithelial cell | 2.36e-10 | 25 |
columnar/cuboidal epithelial cell | 4.33e-10 | 7 |
defensive cell | 5.36e-10 | 7 |
intestinal epithelial cell | 5.72e-08 | 9 |
epithelial cell of alimentary canal | 5.72e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.21e-17 | 15 |
gut-associated lymphoid tissue | 3.12e-15 | 2 |
mucosa-associated lymphoid tissue | 3.12e-15 | 2 |
lymphoid tissue | 3.12e-15 | 2 |
organ component layer | 8.56e-11 | 24 |
lymphoid system | 1.77e-10 | 3 |
intestinal mucosa | 1.90e-09 | 13 |
wall of intestine | 1.90e-09 | 13 |
gastrointestinal system mucosa | 1.90e-09 | 13 |
caecum | 7.41e-09 | 1 |
midgut | 7.41e-09 | 1 |
egg chamber | 1.47e-08 | 1 |
intestine | 2.29e-08 | 31 |
epithelium of mucosa | 5.72e-08 | 9 |
gastrointestinal system epithelium | 5.72e-08 | 9 |
intestinal epithelium | 5.72e-08 | 9 |
gastrointestinal system | 2.54e-07 | 47 |