FFCP PHASE1:Mm9::chr13:83869286..83869316,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-99bp_to_ENSMUST00000171323,uc011zcg.1_5end | |association_with_transcript=-99bp_to_ENSMUST00000171323,uc011zcg.1_5end | ||
|cluster_id=chr13:83869286..83869316,- | |||
|description=CAGE_peak_1_at_ENSMUST00000171323_5end,CAGE_peak_1_at_uc011zcg.1_5end | |description=CAGE_peak_1_at_ENSMUST00000171323_5end,CAGE_peak_1_at_uc011zcg.1_5end | ||
|id=chr13:83869286..83869316,- | |id=chr13:83869286..83869316,- | ||
|ontology_enrichment_celltype=CL:0000540!5.07e-20!33;CL:0000047!5.07e-20!33;CL:0000031!5.07e-20!33;CL:0000404!5.07e-20!33;CL:0000117!4.42e-16!23;CL:0000337!4.42e-16!23;CL:0000393!4.41e-15!39;CL:0000211!4.41e-15!39;CL:0000221!1.40e-13!44;CL:0000133!1.40e-13!44;CL:0002319!2.27e-13!43;CL:0000055!6.21e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-17,23;CL:0000337,1.39e-17,23;CL:0000540,3.62e-13,33;CL:0000047,3.62e-13,33;CL:0000031,3.62e-13,33;CL:0000404,3.62e-13,33;CL:0000393,1.24e-10,39;CL:0000211,1.24e-10,39;CL:0002319,2.42e-09,43;CL:0000221,4.66e-09,44;CL:0000133,4.66e-09,44;CL:0002612,2.77e-08,3;CL:0002614,5.74e-08,3;CL:0002610,1.24e-07,3;CL:0002613,1.62e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.66e-28!73;UBERON:0005743!1.66e-28!73;UBERON:0004121!1.92e-27!102;UBERON:0000924!1.92e-27!102;UBERON:0006601!1.92e-27!102;UBERON:0000073!3.75e-27!75;UBERON:0001016!3.75e-27!75;UBERON:0002346!1.76e-25!71;UBERON:0003075!1.76e-25!71;UBERON:0007284!1.76e-25!71;UBERON:0000033!1.36e-24!63;UBERON:0001049!6.03e-20!52;UBERON:0005068!6.03e-20!52;UBERON:0006241!6.03e-20!52;UBERON:0007135!6.03e-20!52;UBERON:0003056!7.99e-20!49;UBERON:0002020!2.19e-19!34;UBERON:0000955!2.39e-18!50;UBERON:0006238!2.39e-18!50;UBERON:0002616!1.59e-17!49;UBERON:0002791!2.22e-15!29;UBERON:0003528!2.22e-15!29;UBERON:0001893!2.22e-15!29;UBERON:0003080!2.97e-13!40;UBERON:0007811!4.21e-13!86;UBERON:0002780!1.99e-12!39;UBERON:0001890!1.99e-12!39;UBERON:0006240!1.99e-12!39;UBERON:0000153!1.46e-10!94;UBERON:0000956!2.76e-09!21;UBERON:0001869!2.76e-09!21;UBERON:0000203!2.76e-09!21;UBERON:0002619!9.92e-09!17;UBERON:0000970!3.42e-08!9;UBERON:0000019!3.42e-08!9;UBERON:0000047!3.42e-08!9;UBERON:0004088!3.42e-08!9;UBERON:0002104!3.42e-08!9;UBERON:0001456!3.42e-08!9;UBERON:0003072!3.42e-08!9;UBERON:0003071!3.42e-08!9;UBERON:0004128!3.42e-08!9;UBERON:0002021!4.50e-08!10;UBERON:0000411!4.50e-08!10;UBERON:0001950!4.50e-08!10;UBERON:0002420!8.61e-08!8;UBERON:0007245!8.61e-08!8;UBERON:0010009!8.61e-08!8;UBERON:0010011!8.61e-08!8;UBERON:0000454!8.61e-08!8;UBERON:0003076!1.02e-07!12;UBERON:0003057!1.02e-07!12;UBERON:0000020!1.69e-07!12;UBERON:0001032!1.69e-07!12;UBERON:0004456!1.69e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.01e-27,95;UBERON:0000924,1.01e-27,95;UBERON:0006601,1.01e-27,95;UBERON:0002346,2.72e-27,64;UBERON:0003075,2.72e-27,64;UBERON:0007284,2.72e-27,64;UBERON:0001017,2.65e-24,73;UBERON:0001016,1.75e-23,75;UBERON:0010371,3.88e-23,73;UBERON:0000073,4.79e-23,54;UBERON:0001049,3.26e-20,52;UBERON:0005068,3.26e-20,52;UBERON:0006241,3.26e-20,52;UBERON:0007135,3.26e-20,52;UBERON:0002420,1.01e-17,8;UBERON:0007245,1.01e-17,8;UBERON:0010009,1.01e-17,8;UBERON:0010011,1.01e-17,8;UBERON:0000454,1.01e-17,8;UBERON:0003056,1.34e-17,49;UBERON:0010314,4.94e-17,92;UBERON:0000955,1.75e-16,47;UBERON:0006238,1.75e-16,47;UBERON:0002616,4.98e-15,46;UBERON:0003076,5.62e-13,12;UBERON:0003057,5.62e-13,12;UBERON:0002020,1.66e-12,34;UBERON:0000369,2.37e-11,5;UBERON:0002435,2.37e-11,5;UBERON:0000204,2.37e-11,5;UBERON:0010082,2.37e-11,5;UBERON:0002950,1.85e-10,4;UBERON:0001891,1.85e-10,4;UBERON:0009616,1.85e-10,4;UBERON:0010286,1.85e-10,4;UBERON:0003080,3.13e-10,40;UBERON:0000970,3.29e-10,9;UBERON:0000019,3.29e-10,9;UBERON:0000047,3.29e-10,9;UBERON:0010312,3.29e-10,9;UBERON:0004088,3.29e-10,9;UBERON:0002104,3.29e-10,9;UBERON:0001456,3.29e-10,9;UBERON:0003072,3.29e-10,9;UBERON:0004128,3.29e-10,9;UBERON:0003071,3.29e-10,9;UBERON:0003528,3.29e-09,29;UBERON:0002791,3.29e-09,29;UBERON:0001893,3.29e-09,29;UBERON:0002780,6.24e-09,39;UBERON:0001890,6.24e-09,39;UBERON:0006240,6.24e-09,39;UBERON:0002257,2.77e-08,3;UBERON:0001444,3.27e-08,11;UBERON:0002038,5.74e-08,3;UBERON:0009663,5.74e-08,3;UBERON:0009661,5.74e-08,3;UBERON:0000125,5.74e-08,3;UBERON:0002308,5.74e-08,3;UBERON:0004684,1.24e-07,3;UBERON:0002275,1.24e-07,3;UBERON:0000020,1.83e-07,12;UBERON:0001032,1.83e-07,12;UBERON:0004456,1.83e-07,12;UBERON:0004733,2.38e-07,6;UBERON:0004732,2.38e-07,6;UBERON:0002028,2.38e-07,6;UBERON:0007277,2.38e-07,6;UBERON:0002240,3.86e-07,6;UBERON:0005174,3.86e-07,6;UBERON:0001137,3.86e-07,6;UBERON:0000033,7.89e-07,13;UBERON:0005085,7.89e-07,13 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.82084814773638,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0,0.856952953211411,0.883474163806454,0.734944795289724,0.479227355091182,0.919218786610021,1.10115880999389,1.65993539510744,1.68967186581868,2.63772575460388,1.09785172322892,1.04182674111352,1.3959149950069,2.25105044012672,1.5279824777681,2.35702868378934,2.56269025438385,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,4.68449275218475,4.81727425670947,0,0,0,0,2.84602214869163,1.37250180845588,1.25654352112864,0.521472960576829,0.255715457330331,1.87009240103604,2.10913641988085,0,0,0,5.89237196482127,0.260240885925407,0.459804208866946,0.720248519221397,1.20563854268572,2.17716797284249,2.3060469651273,2.81105173679186,20.1788629176432,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0.128867461322093,0.403367049246685,0,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.64096361229084,0.163934945376675,0,0,0.390438744296638,0.646270193198397,0.716906393857656,0.445597348164788,0.283076530788832,1.61924280669958,0.584511715822624,0.790575555893047,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0.335769232728157,0,0,0,0,0,1.12950368523413,1.38097570952153,1.71868654031819,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,1.35942722695261,0.51776031175182,0.207574695168353,0.399024873401031,0.853668028770671,0.243106717068294,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.512201219238954,0.516919220600519,0,0.579421629724277,0.192909220463705,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.761531471025089,0,0.263069711437843,0.407412341537585,0,0.355905054372522,0.394017929502254,0,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,1.07435527024149,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.82084814773638,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0,0.856952953211411,0.883474163806454,0.734944795289724,0.479227355091182,0.919218786610021,1.10115880999389,1.65993539510744,1.68967186581868,2.63772575460388,1.09785172322892,1.04182674111352,1.3959149950069,2.25105044012672,1.5279824777681,2.35702868378934,2.56269025438385,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,4.68449275218475,4.81727425670947,0,0,0,0,2.84602214869163,1.37250180845588,1.25654352112864,0.521472960576829,0.255715457330331,1.87009240103604,2.10913641988085,0,0,0,5.89237196482127,0.260240885925407,0.459804208866946,0.720248519221397,1.20563854268572,2.17716797284249,2.3060469651273,2.81105173679186,20.1788629176432,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0.128867461322093,0.403367049246685,0,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.64096361229084,0.163934945376675,0,0,0.390438744296638,0.646270193198397,0.716906393857656,0.445597348164788,0.283076530788832,1.61924280669958,0.584511715822624,0.790575555893047,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0.335769232728157,0,0,0,0,0,1.12950368523413,1.38097570952153,1.71868654031819,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,1.35942722695261,0.51776031175182,0.207574695168353,0.399024873401031,0.853668028770671,0.243106717068294,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.512201219238954,0.516919220600519,0,0.579421629724277,0.192909220463705,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.761531471025089,0,0.263069711437843,0.407412341537585,0,0.355905054372522,0.394017929502254,0,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,1.07435527024149,0,0,0 | ||
|short_description=p1@ENSMUST00000171323,p1@uc011zcg.1 | |short_description=p1@ENSMUST00000171323,p1@uc011zcg.1 | ||
}} | }} |
Latest revision as of 09:07, 6 August 2015
Short description: | p1@ENSMUST00000171323, p1@uc011zcg.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000171323_5end, CAGE_peak_1_at_uc011zcg.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | -99bp_to_ENSMUST00000171323, uc011zcg.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.39e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.39e-17 | 23 |
neuron | 3.62e-13 | 33 |
neuronal stem cell | 3.62e-13 | 33 |
neuroblast | 3.62e-13 | 33 |
electrically signaling cell | 3.62e-13 | 33 |
electrically responsive cell | 1.24e-10 | 39 |
electrically active cell | 1.24e-10 | 39 |
neural cell | 2.42e-09 | 43 |
ectodermal cell | 4.66e-09 | 44 |
neurectodermal cell | 4.66e-09 | 44 |
neuron of the ventral spinal cord | 2.77e-08 | 3 |
neuron of the substantia nigra | 5.74e-08 | 3 |
raphe nuclei neuron | 1.24e-07 | 3 |
striatum neuron | 1.62e-07 | 3 |