FFCP PHASE1:Mm9::chr2:109757836..109757843,+: Difference between revisions
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{{FFCP|EntrezGene=107515|HGNC=|MCL_coexpression_id=52|UniProt=A2ARI4,A2ARI3,Q8BZR7|association_with_transcript=32bp_to_ENSMUST00000046548,ENSMUST00000111037,NM_172671,uc008lmq.1_5end|description=CAGE_peak_5_at_Lgr4_5end|id=chr2:109757836..109757843,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000223,4.39e-08,20;CL:0000066,8.61e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.55e-12,14;UBERON:0003918,1.55e-12,14;UBERON:0011143,1.55e-12,14;UBERON:0005095,1.55e-12,14;UBERON:0007687,1.55e-12,14;UBERON:0001242,5.66e-10,13;UBERON:0001262,5.66e-10,13;UBERON:0004786,5.66e-10,13;UBERON:0000331,1.39e-09,3;UBERON:0002116,1.39e-09,3;UBERON:0001204,1.39e-09,3;UBERON:0001168,1.39e-09,3;UBERON:0006554,1.88e-09,18;UBERON:0001008,6.94e-09,19;UBERON:0000344,1.63e-08,15;UBERON:0000489,6.51e-08,21;UBERON:0002108,2.80e-07,4;UBERON:0000160,2.83e-07,31|phase1_expression=0.320297694209588,1.39590163055744,0.909998478779072,0,2.50447864973174,1.34303417529512,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0.68822784320151,1.14846392823004,0.86152399231815,0.861884930743556,1.52018735565099,2.52030129759931,2.21730510655305,0,0.61506478758457,0,0.866554859253824,0.831173226792462,1.02084678131185,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0,0.294628585473668,0,0,0.151452386666368,0.151143120213571,0.289864488701678,0.860423876981386,0.679971333707751,1.61910957491345,1.29955283489534,0.448026887097336,0.561777680527007,0.511290967734173,0.259786004602869,0.35333957451034,0.422530259330042,0,2.54805239706646,14.2213340630666,0,0,0,1.1418387971906,0,1.03909497345377,0.520455980298408,0.913396434936424,0.691846491768175,0.452167921657868,0.587943535678524,0.628332956648377,0.741584903203122,0,0,0.161766849947409,0,0,0,0,0.41889341362691,0.766371165625774,0,0,0,0,0,0,0,0,0,0.162241263067758,0.407357455401265,0.622034853050465,0,0.210441855886474,0.520481771850815,0.229902104433473,0.360124259610698,0.150704817835715,0.476255494059295,0.384341160854549,0.281105173679186,0,0.215567992932842,0.189106080167819,0.351902248327898,0.876782929710299,0,0.696504333044333,0.411564272815887,0.995171334092466,0,0,0,0.414251545071004,0,0.36012412292203,0.23674473558521,0.393528463494808,0.617068451549513,0.232533944750408,0.536546802799238,0.350296027101508,0.658239399653922,0.164167464079095,0.486412857275134,0.584799949701329,0,0.268412837520744,0,0.102904612379284,0,1.58670339998127,1.06644125267617,0.928946687441754,1.03093969057675,0.80673409849337,0.667134131534611,0.760902504450237,0,0.494096864172033,0,0,0.58489226135736,0.898819408654221,0.432276099749388,0.597423819763102,0.569003702859245,1.25673363870702,0,1.01825663922657,2.32742984601151,3.99774173374816,1.70738650235495,3.83786384746966,3.92496819603437,5.05928372079382,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0.648540907100142,0.274561413188081,1.43768206527355,0,0.312037673114561,0.757736633841335,0.538192240565737,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,3.31124095565679,0,0,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0.716906393857656,0,0.283076530788832,0,0,0,0.321321316421807,1.27746076687442,0.35613120733451,0.488660878060728,0.329940245945071,0,0,0.302323556964751,0.565815239267694,0,0,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,0,1.26042765821917,0.776152102696527,0.857348140126369,0.532020700926821,0.535106452806212,0,0.304464949114599,0,0,0.220528398054962,0.49465875882444,0.322928853391811,0.663442174209714,0.477489376012546,0.656563598980245,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.790839983952838,1.01659733563424,0.432021363287205,0.627264888043406,1.52853794622324,0.404593039154462,0.330613822901344,0.523511883968059,0.129614973291793,0.621339313086926,0,1.34564891439581,0.827292452285488,0.194451188344048,0.387479470433193,0.337912250981556,0.469428954583016,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0.39736270956253,0.360586348559907,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0.221985953374065,0,0,0.386379188064381,0.375364950902364,0.36630324853453,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0.518936737920883,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0.64183841918363,0.252697211763798,0.25347929989024,0.565879024158229,0.187283014939765,0.320125762024346,0.459483751644906,0,0.231768651889711,0,0,0,0,0.177475806159338,0,0,0.470546902076653,0.169229215783353,0.365855945745545,0.263069711437843,0,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0.467863216890817,0.429742108096597,0.956441660344217,0.441182838239031,0.231867835620421|short_description=p5@Lgr4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:107515 | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2ARI4,uniprot:A2ARI3,uniprot:Q8BZR7 | |||
|association_with_transcript=32bp_to_ENSMUST00000046548,ENSMUST00000111037,NM_172671,uc008lmq.1_5end | |||
|cluster_id=chr2:109757836..109757843,+ | |||
|description=CAGE_peak_5_at_Lgr4_5end | |||
|id=chr2:109757836..109757843,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,4.39e-08,20;CL:0000066,8.61e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.55e-12,14;UBERON:0003918,1.55e-12,14;UBERON:0011143,1.55e-12,14;UBERON:0005095,1.55e-12,14;UBERON:0007687,1.55e-12,14;UBERON:0001242,5.66e-10,13;UBERON:0001262,5.66e-10,13;UBERON:0004786,5.66e-10,13;UBERON:0000331,1.39e-09,3;UBERON:0002116,1.39e-09,3;UBERON:0001204,1.39e-09,3;UBERON:0001168,1.39e-09,3;UBERON:0006554,1.88e-09,18;UBERON:0001008,6.94e-09,19;UBERON:0000344,1.63e-08,15;UBERON:0000489,6.51e-08,21;UBERON:0002108,2.80e-07,4;UBERON:0000160,2.83e-07,31 | |||
|phase1_expression=0.320297694209588,1.39590163055744,0.909998478779072,0,2.50447864973174,1.34303417529512,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0.68822784320151,1.14846392823004,0.86152399231815,0.861884930743556,1.52018735565099,2.52030129759931,2.21730510655305,0,0.61506478758457,0,0.866554859253824,0.831173226792462,1.02084678131185,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0,0.294628585473668,0,0,0.151452386666368,0.151143120213571,0.289864488701678,0.860423876981386,0.679971333707751,1.61910957491345,1.29955283489534,0.448026887097336,0.561777680527007,0.511290967734173,0.259786004602869,0.35333957451034,0.422530259330042,0,2.54805239706646,14.2213340630666,0,0,0,1.1418387971906,0,1.03909497345377,0.520455980298408,0.913396434936424,0.691846491768175,0.452167921657868,0.587943535678524,0.628332956648377,0.741584903203122,0,0,0.161766849947409,0,0,0,0,0.41889341362691,0.766371165625774,0,0,0,0,0,0,0,0,0,0.162241263067758,0.407357455401265,0.622034853050465,0,0.210441855886474,0.520481771850815,0.229902104433473,0.360124259610698,0.150704817835715,0.476255494059295,0.384341160854549,0.281105173679186,0,0.215567992932842,0.189106080167819,0.351902248327898,0.876782929710299,0,0.696504333044333,0.411564272815887,0.995171334092466,0,0,0,0.414251545071004,0,0.36012412292203,0.23674473558521,0.393528463494808,0.617068451549513,0.232533944750408,0.536546802799238,0.350296027101508,0.658239399653922,0.164167464079095,0.486412857275134,0.584799949701329,0,0.268412837520744,0,0.102904612379284,0,1.58670339998127,1.06644125267617,0.928946687441754,1.03093969057675,0.80673409849337,0.667134131534611,0.760902504450237,0,0.494096864172033,0,0,0.58489226135736,0.898819408654221,0.432276099749388,0.597423819763102,0.569003702859245,1.25673363870702,0,1.01825663922657,2.32742984601151,3.99774173374816,1.70738650235495,3.83786384746966,3.92496819603437,5.05928372079382,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0.648540907100142,0.274561413188081,1.43768206527355,0,0.312037673114561,0.757736633841335,0.538192240565737,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,3.31124095565679,0,0,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0.716906393857656,0,0.283076530788832,0,0,0,0.321321316421807,1.27746076687442,0.35613120733451,0.488660878060728,0.329940245945071,0,0,0.302323556964751,0.565815239267694,0,0,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,0,1.26042765821917,0.776152102696527,0.857348140126369,0.532020700926821,0.535106452806212,0,0.304464949114599,0,0,0.220528398054962,0.49465875882444,0.322928853391811,0.663442174209714,0.477489376012546,0.656563598980245,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.790839983952838,1.01659733563424,0.432021363287205,0.627264888043406,1.52853794622324,0.404593039154462,0.330613822901344,0.523511883968059,0.129614973291793,0.621339313086926,0,1.34564891439581,0.827292452285488,0.194451188344048,0.387479470433193,0.337912250981556,0.469428954583016,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0.39736270956253,0.360586348559907,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0.221985953374065,0,0,0.386379188064381,0.375364950902364,0.36630324853453,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0.518936737920883,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0.64183841918363,0.252697211763798,0.25347929989024,0.565879024158229,0.187283014939765,0.320125762024346,0.459483751644906,0,0.231768651889711,0,0,0,0,0.177475806159338,0,0,0.470546902076653,0.169229215783353,0.365855945745545,0.263069711437843,0,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0.467863216890817,0.429742108096597,0.956441660344217,0.441182838239031,0.231867835620421 | |||
|short_description=p5@Lgr4 | |||
}} |
Revision as of 08:33, 6 August 2015
Short description: | p5@Lgr4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lgr4_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | 32bp_to_ENSMUST00000046548, ENSMUST00000111037, NM_172671, uc008lmq.1_5end |
EntrezGene: | 107515 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 4.39e-08 | 20 |
epithelial cell | 8.61e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
kidney | 1.55e-12 | 14 |
kidney mesenchyme | 1.55e-12 | 14 |
upper urinary tract | 1.55e-12 | 14 |
kidney rudiment | 1.55e-12 | 14 |
kidney field | 1.55e-12 | 14 |
intestinal mucosa | 5.66e-10 | 13 |
wall of intestine | 5.66e-10 | 13 |
gastrointestinal system mucosa | 5.66e-10 | 13 |
ileal mucosa | 1.39e-09 | 3 |
ileum | 1.39e-09 | 3 |
mucosa of small intestine | 1.39e-09 | 3 |
wall of small intestine | 1.39e-09 | 3 |
urinary system structure | 1.88e-09 | 18 |
renal system | 6.94e-09 | 19 |
mucosa | 1.63e-08 | 15 |
cavitated compound organ | 6.51e-08 | 21 |
small intestine | 2.80e-07 | 4 |
intestine | 2.83e-07 | 31 |