FFCP PHASE1:Mm9::chr19:11155556..11155567,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:11155556..11155567,- | |||
|description=CAGE_peak_at_chr19:11155556..11155567,- | |description=CAGE_peak_at_chr19:11155556..11155567,- | ||
|id=chr19:11155556..11155567,- | |id=chr19:11155556..11155567,- | ||
|ontology_enrichment_celltype=CL:0002563!9.92e-11!9;CL:0002251!9.92e-11!9;CL:0000239!4.20e-08!6;CL:0000677!4.20e-08!6;CL:0000212!4.20e-08!6;CL:0000584!4.20e-08!6;CL:0000075!9.37e-07!7 | |ontology_enrichment_celltype=CL:0002563!9.92e-11!9;CL:0002251!9.92e-11!9;CL:0000239!4.20e-08!6;CL:0000677!4.20e-08!6;CL:0000212!4.20e-08!6;CL:0000584!4.20e-08!6;CL:0000075!9.37e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.85e-18,9;CL:0002251,4.85e-18,9;CL:0000239,2.52e-13,6;CL:0000677,2.52e-13,6;CL:0000584,2.52e-13,6;CL:0000075,2.61e-11,7;CL:0000066,1.86e-10,25;CL:0002076,3.89e-10,15;CL:0000682,2.81e-08,3;CL:0000223,3.46e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.65e-23!59;UBERON:0000160!5.49e-22!43;UBERON:0000344!3.21e-18!15;UBERON:0001242!7.39e-16!13;UBERON:0000060!7.39e-16!13;UBERON:0001262!7.39e-16!13;UBERON:0004786!7.39e-16!13;UBERON:0003350!9.92e-11!9;UBERON:0004808!9.92e-11!9;UBERON:0001277!9.92e-11!9;UBERON:0001007!1.68e-10!128;UBERON:0001555!1.68e-10!128;UBERON:0007026!1.68e-10!128;UBERON:0004119!4.03e-10!130;UBERON:0000925!4.03e-10!130;UBERON:0006595!4.03e-10!130;UBERON:0004923!1.78e-09!24;UBERON:0004921!2.89e-09!126;UBERON:0004185!2.89e-09!126;UBERON:0000485!2.54e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.51e-51,31;UBERON:0005409,2.43e-44,47;UBERON:0000344,1.50e-31,15;UBERON:0001242,2.77e-27,13;UBERON:0001262,2.77e-27,13;UBERON:0004786,2.77e-27,13;UBERON:0004923,2.64e-18,24;UBERON:0003350,4.85e-18,9;UBERON:0004808,4.85e-18,9;UBERON:0001277,4.85e-18,9;UBERON:0001007,5.74e-16,116;UBERON:0001555,5.74e-16,116;UBERON:0007026,5.74e-16,116;UBERON:0004119,1.46e-15,118;UBERON:0000925,1.46e-15,118;UBERON:0006595,1.46e-15,118;UBERON:0000485,1.91e-14,11;UBERON:0004921,7.96e-14,114;UBERON:0002108,2.13e-10,4;UBERON:0000331,1.83e-08,3;UBERON:0002116,1.83e-08,3;UBERON:0001204,1.83e-08,3;UBERON:0001168,1.83e-08,3 | |||
|phase1_expression=0,29.3139342417063,26.8449551239826,14.5182821427278,12.5223932486587,11.5836697619204,11.9142446703718,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.0850432901510698,0,0,21.7589694999033,24.31738379312,36.7508457033613,29.7225777349762,30.8123862740821,57.0070258369122,38.8126399830293,32.8161155769851,0,0,0,2.02196133825892,2.65975432573588,1.02084678131185,0,0.7813353445238,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,5.02409070763864,0.517875767294343,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0.578397427679647,0,0,0,0,9.31958806090611,0,0,24.7793343552334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,46.2586296177317,12.164726066523,0,0,0.38660238396628,1.81515172161008,1.77902435075896,4.56541502670142,16.6085171540579,5.10566759644434,13.069430857614,9.54991065797524,7.01870713628832,17.9763881730844,29.3947747829584,20.1132685986911,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,1.32745138339963,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,14.5740418314925,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.540026704109006,0.418176592028937,1.31017538247707,1.07891477107857,0.743881101528023,3.66458318777641,16.9795615012249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.824140228955577,0,0.252697211763798,0,0,0.468207537349412,0.192075457214608,0.17230640686684,0,0,0,0,0.441596760403192,0,0,0,0.290692833264657,0,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0.385813221962283,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,29.3139342417063,26.8449551239826,14.5182821427278,12.5223932486587,11.5836697619204,11.9142446703718,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.0850432901510698,0,0,21.7589694999033,24.31738379312,36.7508457033613,29.7225777349762,30.8123862740821,57.0070258369122,38.8126399830293,32.8161155769851,0,0,0,2.02196133825892,2.65975432573588,1.02084678131185,0,0.7813353445238,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,5.02409070763864,0.517875767294343,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0.578397427679647,0,0,0,0,9.31958806090611,0,0,24.7793343552334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,46.2586296177317,12.164726066523,0,0,0.38660238396628,1.81515172161008,1.77902435075896,4.56541502670142,16.6085171540579,5.10566759644434,13.069430857614,9.54991065797524,7.01870713628832,17.9763881730844,29.3947747829584,20.1132685986911,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,1.32745138339963,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,14.5740418314925,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.540026704109006,0.418176592028937,1.31017538247707,1.07891477107857,0.743881101528023,3.66458318777641,16.9795615012249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.824140228955577,0,0.252697211763798,0,0,0.468207537349412,0.192075457214608,0.17230640686684,0,0,0,0,0.441596760403192,0,0,0,0.290692833264657,0,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0.385813221962283,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr19:11155556..11155567,- | |short_description=p@chr19:11155556..11155567,- | ||
}} | }} |
Latest revision as of 07:08, 6 August 2015
Short description: | p@chr19:11155556..11155567, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:11155556..11155567, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.85e-18 | 9 |
epithelial cell of alimentary canal | 4.85e-18 | 9 |
brush border epithelial cell | 2.52e-13 | 6 |
gut absorptive cell | 2.52e-13 | 6 |
enterocyte | 2.52e-13 | 6 |
columnar/cuboidal epithelial cell | 2.61e-11 | 7 |
epithelial cell | 1.86e-10 | 25 |
endo-epithelial cell | 3.89e-10 | 15 |
M cell of gut | 2.81e-08 | 3 |
endodermal cell | 3.46e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.51e-51 | 31 |
gastrointestinal system | 2.43e-44 | 47 |
mucosa | 1.50e-31 | 15 |
intestinal mucosa | 2.77e-27 | 13 |
wall of intestine | 2.77e-27 | 13 |
gastrointestinal system mucosa | 2.77e-27 | 13 |
organ component layer | 2.64e-18 | 24 |
epithelium of mucosa | 4.85e-18 | 9 |
gastrointestinal system epithelium | 4.85e-18 | 9 |
intestinal epithelium | 4.85e-18 | 9 |
digestive system | 5.74e-16 | 116 |
digestive tract | 5.74e-16 | 116 |
primitive gut | 5.74e-16 | 116 |
endoderm-derived structure | 1.46e-15 | 118 |
endoderm | 1.46e-15 | 118 |
presumptive endoderm | 1.46e-15 | 118 |
simple columnar epithelium | 1.91e-14 | 11 |
subdivision of digestive tract | 7.96e-14 | 114 |
small intestine | 2.13e-10 | 4 |
ileal mucosa | 1.83e-08 | 3 |
ileum | 1.83e-08 | 3 |
mucosa of small intestine | 1.83e-08 | 3 |
wall of small intestine | 1.83e-08 | 3 |