FFCP PHASE1:Mm9::chr6:78418516..78418525,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=219|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:78418516..78418525,-|id=chr6:78418516..78418525,-|ontology_enrichment_celltype=CL:0000239!3.64e-21!6;CL:0000677!3.64e-21!6;CL:0000212!3.64e-21!6;CL:0000584!3.64e-21!6;CL:0002563!1.68e-18!9;CL:0002251!1.68e-18!9;CL:0000075!4.58e-18!7;CL:0000066!9.30e-13!25;CL:0000473!5.06e-12!3;CL:0000627!5.06e-12!3;CL:0000682!5.06e-12!3;CL:0002076!9.45e-11!15;CL:0000223!7.72e-08!20|ontology_enrichment_celltype_v019_2=CL:0000682,5.18e-19,3;CL:0000239,2.73e-16,6;CL:0000677,2.73e-16,6;CL:0000584,2.73e-16,6;CL:0000075,5.29e-14,7;CL:0000066,2.65e-11,25;CL:0002563,6.05e-11,9;CL:0002251,6.05e-11,9;CL:0000473,1.83e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.13e-37!15;UBERON:0001242!2.21e-31!13;UBERON:0000060!2.21e-31!13;UBERON:0001262!2.21e-31!13;UBERON:0004786!2.21e-31!13;UBERON:0004923!1.28e-22!24;UBERON:0003350!1.68e-18!9;UBERON:0004808!1.68e-18!9;UBERON:0001277!1.68e-18!9;UBERON:0000160!5.54e-18!43;UBERON:0000485!5.56e-15!11;UBERON:0005409!2.98e-12!59;UBERON:0000331!6.48e-12!3;UBERON:0002116!6.48e-12!3;UBERON:0001204!6.48e-12!3;UBERON:0001168!6.48e-12!3;UBERON:0001962!7.59e-08!2;UBERON:0001961!7.59e-08!2;UBERON:0001744!7.59e-08!2;UBERON:0001007!3.95e-07!128;UBERON:0001555!3.95e-07!128;UBERON:0007026!3.95e-07!128;UBERON:0004119!5.83e-07!130;UBERON:0000925!5.83e-07!130;UBERON:0006595!5.83e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.06e-24,15;UBERON:0001242,3.69e-22,13;UBERON:0001262,3.69e-22,13;UBERON:0004786,3.69e-22,13;UBERON:0000160,1.20e-21,31;UBERON:0000331,7.84e-19,3;UBERON:0002116,7.84e-19,3;UBERON:0001204,7.84e-19,3;UBERON:0001168,7.84e-19,3;UBERON:0004923,3.67e-15,24;UBERON:0002108,2.80e-14,4;UBERON:0005409,7.64e-14,47;UBERON:0003350,6.05e-11,9;UBERON:0004808,6.05e-11,9;UBERON:0001277,6.05e-11,9;UBERON:0000485,5.44e-09,11;UBERON:0003199,6.32e-07,1|phase1_expression=0,4.53668029931169,8.18998630901165,0.90739263392049,4.00716583957078,0.839396359559449,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.60586496747019,9.76194338995534,6.03066794622705,4.09395342103189,5.13063232532209,2.01624103807945,10.4213340007993,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.58670339998127,0,0,0,0,0,0,1.89811624617805,0,0,0,0,1.79763881730844,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:78418516..78418525,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:78418516..78418525,- | |||
|description=CAGE_peak_at_chr6:78418516..78418525,- | |||
|id=chr6:78418516..78418525,- | |||
|ontology_enrichment_celltype=CL:0000239!3.64e-21!6;CL:0000677!3.64e-21!6;CL:0000212!3.64e-21!6;CL:0000584!3.64e-21!6;CL:0002563!1.68e-18!9;CL:0002251!1.68e-18!9;CL:0000075!4.58e-18!7;CL:0000066!9.30e-13!25;CL:0000473!5.06e-12!3;CL:0000627!5.06e-12!3;CL:0000682!5.06e-12!3;CL:0002076!9.45e-11!15;CL:0000223!7.72e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,5.18e-19,3;CL:0000239,2.73e-16,6;CL:0000677,2.73e-16,6;CL:0000584,2.73e-16,6;CL:0000075,5.29e-14,7;CL:0000066,2.65e-11,25;CL:0002563,6.05e-11,9;CL:0002251,6.05e-11,9;CL:0000473,1.83e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.13e-37!15;UBERON:0001242!2.21e-31!13;UBERON:0000060!2.21e-31!13;UBERON:0001262!2.21e-31!13;UBERON:0004786!2.21e-31!13;UBERON:0004923!1.28e-22!24;UBERON:0003350!1.68e-18!9;UBERON:0004808!1.68e-18!9;UBERON:0001277!1.68e-18!9;UBERON:0000160!5.54e-18!43;UBERON:0000485!5.56e-15!11;UBERON:0005409!2.98e-12!59;UBERON:0000331!6.48e-12!3;UBERON:0002116!6.48e-12!3;UBERON:0001204!6.48e-12!3;UBERON:0001168!6.48e-12!3;UBERON:0001962!7.59e-08!2;UBERON:0001961!7.59e-08!2;UBERON:0001744!7.59e-08!2;UBERON:0001007!3.95e-07!128;UBERON:0001555!3.95e-07!128;UBERON:0007026!3.95e-07!128;UBERON:0004119!5.83e-07!130;UBERON:0000925!5.83e-07!130;UBERON:0006595!5.83e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.06e-24,15;UBERON:0001242,3.69e-22,13;UBERON:0001262,3.69e-22,13;UBERON:0004786,3.69e-22,13;UBERON:0000160,1.20e-21,31;UBERON:0000331,7.84e-19,3;UBERON:0002116,7.84e-19,3;UBERON:0001204,7.84e-19,3;UBERON:0001168,7.84e-19,3;UBERON:0004923,3.67e-15,24;UBERON:0002108,2.80e-14,4;UBERON:0005409,7.64e-14,47;UBERON:0003350,6.05e-11,9;UBERON:0004808,6.05e-11,9;UBERON:0001277,6.05e-11,9;UBERON:0000485,5.44e-09,11;UBERON:0003199,6.32e-07,1 | |||
|phase1_expression=0,4.53668029931169,8.18998630901165,0.90739263392049,4.00716583957078,0.839396359559449,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.60586496747019,9.76194338995534,6.03066794622705,4.09395342103189,5.13063232532209,2.01624103807945,10.4213340007993,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.58670339998127,0,0,0,0,0,0,1.89811624617805,0,0,0,0,1.79763881730844,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:78418516..78418525,- | |||
}} |
Latest revision as of 03:43, 6 August 2015
Short description: | p@chr6:78418516..78418525, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78418516..78418525, - |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 5.18e-19 | 3 |
brush border epithelial cell | 2.73e-16 | 6 |
gut absorptive cell | 2.73e-16 | 6 |
enterocyte | 2.73e-16 | 6 |
columnar/cuboidal epithelial cell | 5.29e-14 | 7 |
epithelial cell | 2.65e-11 | 25 |
intestinal epithelial cell | 6.05e-11 | 9 |
epithelial cell of alimentary canal | 6.05e-11 | 9 |
defensive cell | 1.83e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.06e-24 | 15 |
intestinal mucosa | 3.69e-22 | 13 |
wall of intestine | 3.69e-22 | 13 |
gastrointestinal system mucosa | 3.69e-22 | 13 |
intestine | 1.20e-21 | 31 |
ileal mucosa | 7.84e-19 | 3 |
ileum | 7.84e-19 | 3 |
mucosa of small intestine | 7.84e-19 | 3 |
wall of small intestine | 7.84e-19 | 3 |
organ component layer | 3.67e-15 | 24 |
small intestine | 2.80e-14 | 4 |
gastrointestinal system | 7.64e-14 | 47 |
epithelium of mucosa | 6.05e-11 | 9 |
gastrointestinal system epithelium | 6.05e-11 | 9 |
intestinal epithelium | 6.05e-11 | 9 |
simple columnar epithelium | 5.44e-09 | 11 |
egg chamber | 6.32e-07 | 1 |