FFCP PHASE1:Mm9::chr6:78321036..78321044,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:78321036..78321044,+
|short_description=p@chr6:78321036..78321044,+
|description=CAGE_peak_at_chr6:78321036..78321044,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:78321036..78321044,+ | |||
|description=CAGE_peak_at_chr6:78321036..78321044,+ | |||
|id=chr6:78321036..78321044,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.20e-20!6;CL:0000677!1.20e-20!6;CL:0000212!1.20e-20!6;CL:0000584!1.20e-20!6;CL:0002563!4.16e-18!9;CL:0002251!4.16e-18!9;CL:0000075!1.26e-17!7;CL:0000066!1.81e-12!25;CL:0000473!8.99e-12!3;CL:0000627!8.99e-12!3;CL:0000682!8.99e-12!3;CL:0002076!1.60e-10!15;CL:0000223!1.13e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.57e-21,3;CL:0000239,7.52e-11,6;CL:0000677,7.52e-11,6;CL:0000584,7.52e-11,6;CL:0000066,1.41e-09,25;CL:0000075,2.22e-09,7;CL:0000473,2.22e-09,7;CL:0002563,2.07e-07,9;CL:0002251,2.07e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.21e-37!15;UBERON:0001242!5.31e-31!13;UBERON:0000060!5.31e-31!13;UBERON:0001262!5.31e-31!13;UBERON:0004786!5.31e-31!13;UBERON:0004923!2.85e-22!24;UBERON:0000160!1.35e-20!43;UBERON:0003350!4.16e-18!9;UBERON:0004808!4.16e-18!9;UBERON:0001277!4.16e-18!9;UBERON:0000485!1.16e-14!11;UBERON:0005409!4.18e-14!59;UBERON:0000331!8.28e-12!3;UBERON:0002116!8.28e-12!3;UBERON:0001204!8.28e-12!3;UBERON:0001168!8.28e-12!3;UBERON:0001007!4.08e-08!128;UBERON:0001555!4.08e-08!128;UBERON:0007026!4.08e-08!128;UBERON:0004119!6.27e-08!130;UBERON:0000925!6.27e-08!130;UBERON:0006595!6.27e-08!130;UBERON:0001962!1.21e-07!2;UBERON:0001961!1.21e-07!2;UBERON:0001744!1.21e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000331,3.91e-21,3;UBERON:0002116,3.91e-21,3;UBERON:0001204,3.91e-21,3;UBERON:0001168,3.91e-21,3;UBERON:0001242,1.13e-18,13;UBERON:0001262,1.13e-18,13;UBERON:0004786,1.13e-18,13;UBERON:0000160,7.99e-17,31;UBERON:0000344,3.71e-16,15;UBERON:0002108,5.07e-16,4;UBERON:0005409,8.18e-11,47;UBERON:0004923,5.29e-10,24;UBERON:0003350,2.07e-07,9;UBERON:0004808,2.07e-07,9;UBERON:0001277,2.07e-07,9 | |||
|phase1_expression=0,5.23463111459042,8.18998630901165,0.90739263392049,1.50268718983904,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.91763712426868,7.46501553349526,3.4460959692726,2.37018355954478,3.42042155021473,2.01624103807945,23.0599731081517,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,4.23120906661671,0,0,0,0,0,0,0.474529061544512,0,0,0,0,1.79763881730844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,12.6502330289999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,5.23463111459042,8.18998630901165,0.90739263392049,1.50268718983904,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.91763712426868,7.46501553349526,3.4460959692726,2.37018355954478,3.42042155021473,2.01624103807945,23.0599731081517,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,4.23120906661671,0,0,0,0,0,0,0.474529061544512,0,0,0,0,1.79763881730844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,12.6502330289999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78321036..78321044,+ | |||
}} | }} |
Latest revision as of 03:27, 6 August 2015
Short description: | p@chr6:78321036..78321044, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78321036..78321044, + |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.57e-21 | 3 |
brush border epithelial cell | 7.52e-11 | 6 |
gut absorptive cell | 7.52e-11 | 6 |
enterocyte | 7.52e-11 | 6 |
epithelial cell | 1.41e-09 | 25 |
columnar/cuboidal epithelial cell | 2.22e-09 | 7 |
defensive cell | 2.22e-09 | 7 |
intestinal epithelial cell | 2.07e-07 | 9 |
epithelial cell of alimentary canal | 2.07e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ileal mucosa | 3.91e-21 | 3 |
ileum | 3.91e-21 | 3 |
mucosa of small intestine | 3.91e-21 | 3 |
wall of small intestine | 3.91e-21 | 3 |
intestinal mucosa | 1.13e-18 | 13 |
wall of intestine | 1.13e-18 | 13 |
gastrointestinal system mucosa | 1.13e-18 | 13 |
intestine | 7.99e-17 | 31 |
mucosa | 3.71e-16 | 15 |
small intestine | 5.07e-16 | 4 |
gastrointestinal system | 8.18e-11 | 47 |
organ component layer | 5.29e-10 | 24 |
epithelium of mucosa | 2.07e-07 | 9 |
gastrointestinal system epithelium | 2.07e-07 | 9 |
intestinal epithelium | 2.07e-07 | 9 |