FFCP PHASE1:Mm9::chr6:72943547..72943571,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=285|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:72943547..72943571,+|id=chr6:72943547..72943571,+|ontology_enrichment_celltype=CL:0000791!1.32e-07!9;CL:0000789!1.32e-07!9;CL:0002420!1.32e-07!9;CL:0002419!1.32e-07!9;CL:0000790!1.32e-07!9;CL:0002031!8.80e-07!25|ontology_enrichment_celltype_v019_2=CL:0000791,3.51e-11,9;CL:0000789,3.51e-11,9;CL:0002420,3.51e-11,9;CL:0002419,3.51e-11,9;CL:0000790,3.51e-11,9;CL:0000084,4.29e-09,11;CL:0000827,4.29e-09,11;CL:0000838,2.61e-08,12;CL:0000624,2.61e-08,8;CL:0000542,1.20e-07,13;CL:0000051,1.20e-07,13;CL:0002031,5.45e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.09e-14!29;UBERON:0002193!5.96e-14!48;UBERON:0002390!9.01e-13!45;UBERON:0003061!9.01e-13!45;UBERON:0003408!1.27e-12!24;UBERON:0001007!1.03e-11!128;UBERON:0001555!1.03e-11!128;UBERON:0007026!1.03e-11!128;UBERON:0002370!1.52e-11!23;UBERON:0000974!1.52e-11!23;UBERON:0004807!1.52e-11!23;UBERON:0005058!1.52e-11!23;UBERON:0003351!1.52e-11!23;UBERON:0009113!1.52e-11!23;UBERON:0003295!1.52e-11!23;UBERON:0009722!1.52e-11!23;UBERON:0005562!1.52e-11!23;UBERON:0007690!1.52e-11!23;UBERON:0004921!1.99e-11!126;UBERON:0004185!1.99e-11!126;UBERON:0004119!2.49e-11!130;UBERON:0000925!2.49e-11!130;UBERON:0006595!2.49e-11!130;UBERON:0006562!7.19e-11!24;UBERON:0001557!7.19e-11!24;UBERON:0001042!7.19e-11!24;UBERON:0008814!7.19e-11!24;UBERON:0009145!7.19e-11!24;UBERON:0001004!6.72e-10!42;UBERON:0000072!3.73e-09!27;UBERON:0000065!4.60e-09!41;UBERON:0001041!5.38e-08!92;UBERON:0000077!7.40e-08!97;UBERON:0002405!3.82e-07!70;UBERON:0000063!6.00e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.46e-11,29;UBERON:0005057,1.46e-11,29;UBERON:0000077,3.17e-11,35;UBERON:0002193,3.41e-11,48;UBERON:0002405,3.41e-11,48;UBERON:0002390,4.27e-10,45;UBERON:0003061,4.27e-10,45;UBERON:0003408,4.22e-09,24;UBERON:0007811,7.63e-09,36;UBERON:0002370,2.16e-07,23;UBERON:0000974,2.16e-07,23;UBERON:0004807,2.16e-07,23;UBERON:0005058,2.16e-07,23;UBERON:0003351,2.16e-07,23;UBERON:0009113,2.16e-07,23;UBERON:0003295,2.16e-07,23;UBERON:0009722,2.16e-07,23;UBERON:0005562,2.16e-07,23;UBERON:0007690,2.16e-07,23;UBERON:0001004,2.79e-07,42;UBERON:0000153,3.91e-07,43;UBERON:0006562,4.77e-07,24;UBERON:0001557,4.77e-07,24;UBERON:0001042,4.77e-07,24;UBERON:0008814,4.77e-07,24;UBERON:0009145,4.77e-07,24|phase1_expression=0,0,0,0,0,0,0,4.39019299701359,0.703943610758334,0.234064526321993,0,0,15.0656642339461,7.08105259593879,0.666219523631325,0.404950534779652,0,1.89277299214943,2.60517423850904,0.42438965179803,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,8.4023449785616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.0454716445983,0.148442139064825,0,0,0.461230994512117,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10441855886474,0,0,0,0,0,0,0,1.03481348295606,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0.444756087689741,0,0,0,0,0.198956472041151,0.58489226135736,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0,0,0,0,0.44292937929755,0,0.81931657357869,1.20879487306127,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15479086080775,1.32745138339963,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,2.56306321196779,0,0,1.69531611304222,2.1871076435364,0.686334519619568,0,0,0,0.954670618015114,0,0,0,0,0.655087691238533,0.539457385539283,0.743881101528023,0.26175594198403,0.648074866458964,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0.129920822977795,0.537080087002444,0.198681354781265,0.961563596159751,1.9199638532695,0.403865799792591,0.990688486514998,0.705783295957884,1.94915761479505,1.44317762460494,2.68816875017609,0,0,0,0,1.15913756419314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr6:72943547..72943571,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=285 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:72943547..72943571,+ | |||
|description=CAGE_peak_at_chr6:72943547..72943571,+ | |||
|id=chr6:72943547..72943571,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.32e-07!9;CL:0000789!1.32e-07!9;CL:0002420!1.32e-07!9;CL:0002419!1.32e-07!9;CL:0000790!1.32e-07!9;CL:0002031!8.80e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.51e-11,9;CL:0000789,3.51e-11,9;CL:0002420,3.51e-11,9;CL:0002419,3.51e-11,9;CL:0000790,3.51e-11,9;CL:0000084,4.29e-09,11;CL:0000827,4.29e-09,11;CL:0000838,2.61e-08,12;CL:0000624,2.61e-08,8;CL:0000542,1.20e-07,13;CL:0000051,1.20e-07,13;CL:0002031,5.45e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.09e-14!29;UBERON:0002193!5.96e-14!48;UBERON:0002390!9.01e-13!45;UBERON:0003061!9.01e-13!45;UBERON:0003408!1.27e-12!24;UBERON:0001007!1.03e-11!128;UBERON:0001555!1.03e-11!128;UBERON:0007026!1.03e-11!128;UBERON:0002370!1.52e-11!23;UBERON:0000974!1.52e-11!23;UBERON:0004807!1.52e-11!23;UBERON:0005058!1.52e-11!23;UBERON:0003351!1.52e-11!23;UBERON:0009113!1.52e-11!23;UBERON:0003295!1.52e-11!23;UBERON:0009722!1.52e-11!23;UBERON:0005562!1.52e-11!23;UBERON:0007690!1.52e-11!23;UBERON:0004921!1.99e-11!126;UBERON:0004185!1.99e-11!126;UBERON:0004119!2.49e-11!130;UBERON:0000925!2.49e-11!130;UBERON:0006595!2.49e-11!130;UBERON:0006562!7.19e-11!24;UBERON:0001557!7.19e-11!24;UBERON:0001042!7.19e-11!24;UBERON:0008814!7.19e-11!24;UBERON:0009145!7.19e-11!24;UBERON:0001004!6.72e-10!42;UBERON:0000072!3.73e-09!27;UBERON:0000065!4.60e-09!41;UBERON:0001041!5.38e-08!92;UBERON:0000077!7.40e-08!97;UBERON:0002405!3.82e-07!70;UBERON:0000063!6.00e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.46e-11,29;UBERON:0005057,1.46e-11,29;UBERON:0000077,3.17e-11,35;UBERON:0002193,3.41e-11,48;UBERON:0002405,3.41e-11,48;UBERON:0002390,4.27e-10,45;UBERON:0003061,4.27e-10,45;UBERON:0003408,4.22e-09,24;UBERON:0007811,7.63e-09,36;UBERON:0002370,2.16e-07,23;UBERON:0000974,2.16e-07,23;UBERON:0004807,2.16e-07,23;UBERON:0005058,2.16e-07,23;UBERON:0003351,2.16e-07,23;UBERON:0009113,2.16e-07,23;UBERON:0003295,2.16e-07,23;UBERON:0009722,2.16e-07,23;UBERON:0005562,2.16e-07,23;UBERON:0007690,2.16e-07,23;UBERON:0001004,2.79e-07,42;UBERON:0000153,3.91e-07,43;UBERON:0006562,4.77e-07,24;UBERON:0001557,4.77e-07,24;UBERON:0001042,4.77e-07,24;UBERON:0008814,4.77e-07,24;UBERON:0009145,4.77e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,4.39019299701359,0.703943610758334,0.234064526321993,0,0,15.0656642339461,7.08105259593879,0.666219523631325,0.404950534779652,0,1.89277299214943,2.60517423850904,0.42438965179803,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35217285206807,8.4023449785616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.0454716445983,0.148442139064825,0,0,0.461230994512117,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10441855886474,0,0,0,0,0,0,0,1.03481348295606,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0.444756087689741,0,0,0,0,0.198956472041151,0.58489226135736,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0,0,0,0,0.44292937929755,0,0.81931657357869,1.20879487306127,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15479086080775,1.32745138339963,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,2.56306321196779,0,0,1.69531611304222,2.1871076435364,0.686334519619568,0,0,0,0.954670618015114,0,0,0,0,0.655087691238533,0.539457385539283,0.743881101528023,0.26175594198403,0.648074866458964,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0.129920822977795,0.537080087002444,0.198681354781265,0.961563596159751,1.9199638532695,0.403865799792591,0.990688486514998,0.705783295957884,1.94915761479505,1.44317762460494,2.68816875017609,0,0,0,0,1.15913756419314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr6:72943547..72943571,+ | |||
}} |
Latest revision as of 03:07, 6 August 2015
Short description: | p@chr6:72943547..72943571, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:72943547..72943571, + |
Coexpression cluster: | MCL_coexpression_mm9:285 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.51e-11 | 9 |
alpha-beta T cell | 3.51e-11 | 9 |
immature T cell | 3.51e-11 | 9 |
mature T cell | 3.51e-11 | 9 |
immature alpha-beta T cell | 3.51e-11 | 9 |
T cell | 4.29e-09 | 11 |
pro-T cell | 4.29e-09 | 11 |
lymphoid lineage restricted progenitor cell | 2.61e-08 | 12 |
CD4-positive, alpha-beta T cell | 2.61e-08 | 8 |
lymphocyte | 1.20e-07 | 13 |
common lymphoid progenitor | 1.20e-07 | 13 |
hematopoietic lineage restricted progenitor cell | 5.45e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.46e-11 | 29 |
immune organ | 1.46e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 3.17e-11 | 35 |
hemolymphoid system | 3.41e-11 | 48 |
immune system | 3.41e-11 | 48 |
hematopoietic system | 4.27e-10 | 45 |
blood island | 4.27e-10 | 45 |
gland of gut | 4.22e-09 | 24 |
craniocervical region | 7.63e-09 | 36 |
thymus | 2.16e-07 | 23 |
neck | 2.16e-07 | 23 |
respiratory system epithelium | 2.16e-07 | 23 |
hemolymphoid system gland | 2.16e-07 | 23 |
pharyngeal epithelium | 2.16e-07 | 23 |
thymic region | 2.16e-07 | 23 |
pharyngeal gland | 2.16e-07 | 23 |
entire pharyngeal arch endoderm | 2.16e-07 | 23 |
thymus primordium | 2.16e-07 | 23 |
early pharyngeal endoderm | 2.16e-07 | 23 |
respiratory system | 2.79e-07 | 42 |
anterior region of body | 3.91e-07 | 43 |
pharynx | 4.77e-07 | 24 |
upper respiratory tract | 4.77e-07 | 24 |
chordate pharynx | 4.77e-07 | 24 |
pharyngeal arch system | 4.77e-07 | 24 |
pharyngeal region of foregut | 4.77e-07 | 24 |