FFCP PHASE1:Mm9::chr5:114593479..114593491,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=424|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:114593479..114593491,+|id=chr5:114593479..114593491,+|ontology_enrichment_celltype=CL:0002563!2.14e-17!9;CL:0002251!2.14e-17!9;CL:0000239!1.92e-15!6;CL:0000677!1.92e-15!6;CL:0000212!1.92e-15!6;CL:0000584!1.92e-15!6;CL:0000075!4.00e-13!7;CL:0000066!2.38e-10!25;CL:0002076!7.50e-10!15;CL:0000473!2.14e-08!3;CL:0000627!2.14e-08!3;CL:0000682!2.14e-08!3;CL:0000223!4.96e-07!20|ontology_enrichment_celltype_v019_2=CL:0000239,5.81e-26,6;CL:0000677,5.81e-26,6;CL:0000584,5.81e-26,6;CL:0002563,1.57e-24,9;CL:0002251,1.57e-24,9;CL:0000075,2.86e-22,7;CL:0000066,4.11e-15,25;CL:0002076,1.23e-14,15;CL:0000223,6.56e-11,20;CL:0000682,4.24e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!8.60e-31!15;UBERON:0001242!8.78e-27!13;UBERON:0000060!8.78e-27!13;UBERON:0001262!8.78e-27!13;UBERON:0004786!8.78e-27!13;UBERON:0000160!3.73e-19!43;UBERON:0004923!5.52e-18!24;UBERON:0003350!2.14e-17!9;UBERON:0004808!2.14e-17!9;UBERON:0001277!2.14e-17!9;UBERON:0005409!8.32e-16!59;UBERON:0000485!5.76e-14!11;UBERON:0000331!5.69e-09!3;UBERON:0002116!5.69e-09!3;UBERON:0001204!5.69e-09!3;UBERON:0001168!5.69e-09!3|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.94e-38,13;UBERON:0001262,2.94e-38,13;UBERON:0004786,2.94e-38,13;UBERON:0000344,4.63e-33,15;UBERON:0003350,1.57e-24,9;UBERON:0004808,1.57e-24,9;UBERON:0001277,1.57e-24,9;UBERON:0000160,1.62e-23,31;UBERON:0004923,2.29e-20,24;UBERON:0000331,4.00e-20,3;UBERON:0002116,4.00e-20,3;UBERON:0001204,4.00e-20,3;UBERON:0001168,4.00e-20,3;UBERON:0000485,4.87e-20,11;UBERON:0005409,3.22e-18,47;UBERON:0002108,2.96e-15,4;UBERON:0001153,4.65e-08,1;UBERON:0001045,4.65e-08,1|phase1_expression=0,2.79180326111489,0.454999239389536,1.81478526784098,1.00179145989269,3.02182689441402,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.22940928106717,1.14846392823004,0.86152399231815,2.37018355954478,2.85035129184561,3.52842181663903,3.32595765982957,0,0,0,1.44425809875637,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,5.59175283654366,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0.432276099749388,2.19055400579804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,4.53652406521275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0|short_description=p@chr5:114593479..114593491,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=424 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:114593479..114593491,+ | |||
|description=CAGE_peak_at_chr5:114593479..114593491,+ | |||
|id=chr5:114593479..114593491,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.14e-17!9;CL:0002251!2.14e-17!9;CL:0000239!1.92e-15!6;CL:0000677!1.92e-15!6;CL:0000212!1.92e-15!6;CL:0000584!1.92e-15!6;CL:0000075!4.00e-13!7;CL:0000066!2.38e-10!25;CL:0002076!7.50e-10!15;CL:0000473!2.14e-08!3;CL:0000627!2.14e-08!3;CL:0000682!2.14e-08!3;CL:0000223!4.96e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.81e-26,6;CL:0000677,5.81e-26,6;CL:0000584,5.81e-26,6;CL:0002563,1.57e-24,9;CL:0002251,1.57e-24,9;CL:0000075,2.86e-22,7;CL:0000066,4.11e-15,25;CL:0002076,1.23e-14,15;CL:0000223,6.56e-11,20;CL:0000682,4.24e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.60e-31!15;UBERON:0001242!8.78e-27!13;UBERON:0000060!8.78e-27!13;UBERON:0001262!8.78e-27!13;UBERON:0004786!8.78e-27!13;UBERON:0000160!3.73e-19!43;UBERON:0004923!5.52e-18!24;UBERON:0003350!2.14e-17!9;UBERON:0004808!2.14e-17!9;UBERON:0001277!2.14e-17!9;UBERON:0005409!8.32e-16!59;UBERON:0000485!5.76e-14!11;UBERON:0000331!5.69e-09!3;UBERON:0002116!5.69e-09!3;UBERON:0001204!5.69e-09!3;UBERON:0001168!5.69e-09!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.94e-38,13;UBERON:0001262,2.94e-38,13;UBERON:0004786,2.94e-38,13;UBERON:0000344,4.63e-33,15;UBERON:0003350,1.57e-24,9;UBERON:0004808,1.57e-24,9;UBERON:0001277,1.57e-24,9;UBERON:0000160,1.62e-23,31;UBERON:0004923,2.29e-20,24;UBERON:0000331,4.00e-20,3;UBERON:0002116,4.00e-20,3;UBERON:0001204,4.00e-20,3;UBERON:0001168,4.00e-20,3;UBERON:0000485,4.87e-20,11;UBERON:0005409,3.22e-18,47;UBERON:0002108,2.96e-15,4;UBERON:0001153,4.65e-08,1;UBERON:0001045,4.65e-08,1 | |||
|phase1_expression=0,2.79180326111489,0.454999239389536,1.81478526784098,1.00179145989269,3.02182689441402,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.22940928106717,1.14846392823004,0.86152399231815,2.37018355954478,2.85035129184561,3.52842181663903,3.32595765982957,0,0,0,1.44425809875637,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,5.59175283654366,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0.432276099749388,2.19055400579804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,4.53652406521275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr5:114593479..114593491,+ | |||
}} |
Latest revision as of 01:54, 6 August 2015
Short description: | p@chr5:114593479..114593491, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:114593479..114593491, + |
Coexpression cluster: | MCL_coexpression_mm9:424 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.81e-26 | 6 |
gut absorptive cell | 5.81e-26 | 6 |
enterocyte | 5.81e-26 | 6 |
intestinal epithelial cell | 1.57e-24 | 9 |
epithelial cell of alimentary canal | 1.57e-24 | 9 |
columnar/cuboidal epithelial cell | 2.86e-22 | 7 |
epithelial cell | 4.11e-15 | 25 |
endo-epithelial cell | 1.23e-14 | 15 |
endodermal cell | 6.56e-11 | 20 |
M cell of gut | 4.24e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.94e-38 | 13 |
wall of intestine | 2.94e-38 | 13 |
gastrointestinal system mucosa | 2.94e-38 | 13 |
mucosa | 4.63e-33 | 15 |
epithelium of mucosa | 1.57e-24 | 9 |
gastrointestinal system epithelium | 1.57e-24 | 9 |
intestinal epithelium | 1.57e-24 | 9 |
intestine | 1.62e-23 | 31 |
organ component layer | 2.29e-20 | 24 |
ileal mucosa | 4.00e-20 | 3 |
ileum | 4.00e-20 | 3 |
mucosa of small intestine | 4.00e-20 | 3 |
wall of small intestine | 4.00e-20 | 3 |
simple columnar epithelium | 4.87e-20 | 11 |
gastrointestinal system | 3.22e-18 | 47 |
small intestine | 2.96e-15 | 4 |
caecum | 4.65e-08 | 1 |
midgut | 4.65e-08 | 1 |